RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 ORMDL3Q8N138 153 aa16.3■□□□□ 0.2
CNEP1R1-202ENST00000427478 WFDC12Q8WWY7 111 aa16.3■□□□□ 0.2
CNEP1R1-202ENST00000427478 U3KQK5 164 aa16.3■□□□□ 0.2
CNEP1R1-202ENST00000427478 ACANP16112 2415 aa16.29■□□□□ 0.2
CNEP1R1-202ENST00000427478 IGHV1-24A0A0C4DH33 117 aa16.29■□□□□ 0.2
CNEP1R1-202ENST00000427478 C3orf79P0CE67 100 aa16.29■□□□□ 0.2
CNEP1R1-202ENST00000427478 C11orf44Q8N8P7 122 aa16.29■□□□□ 0.2
CNEP1R1-202ENST00000427478 PRELID3AQ96N28 172 aa16.29■□□□□ 0.2
CNEP1R1-202ENST00000427478 TSTD3H0UI37 97 aa16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 SMKR1H3BMG3 65 aa16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 TIMM8BQ9Y5J9 83 aaPredicted RBP16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 NCR2O95944 276 aa16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 OR5AL1P0C617 328 aa16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 ANXA2RQ3ZCQ2 193 aa16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 OR9G4Q8NGQ1 327 aa16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 PEMTQ9UBM1 199 aa16.28■□□□□ 0.2
CNEP1R1-202ENST00000427478 SNAI2O43623 268 aa16.27■□□□□ 0.2
CNEP1R1-202ENST00000427478 RNASE1P07998 156 aaKnown RBP16.27■□□□□ 0.2
CNEP1R1-202ENST00000427478 CKS2P33552 79 aa16.27■□□□□ 0.2
CNEP1R1-202ENST00000427478 DMRTA1Q5VZB9 504 aa16.27■□□□□ 0.2
CNEP1R1-202ENST00000427478 DLX4Q92988 240 aaPredicted RBP16.27■□□□□ 0.2
CNEP1R1-202ENST00000427478 RNF185Q96GF1 192 aa16.27■□□□□ 0.2
CNEP1R1-202ENST00000427478 MYO9AB2RTY4 2548 aa16.27■□□□□ 0.2
CNEP1R1-202ENST00000427478 KLLNB2CW77 178 aa16.27■□□□□ 0.19
CNEP1R1-202ENST00000427478 SCGB2A2Q13296 93 aa16.27■□□□□ 0.19
CNEP1R1-202ENST00000427478 Q8N976 141 aa16.27■□□□□ 0.19
CNEP1R1-202ENST00000427478 FASNP49327 2511 aaKnown RBP16.26■□□□□ 0.19
CNEP1R1-202ENST00000427478 A0A0J9YX75 114 aa16.26■□□□□ 0.19
CNEP1R1-202ENST00000427478 IGKV3-20P01619 116 aa16.26■□□□□ 0.19
CNEP1R1-202ENST00000427478 RAB4AP20338 218 aa16.26■□□□□ 0.19
CNEP1R1-202ENST00000427478 SPANXN1Q5VSR9 72 aa16.26■□□□□ 0.19
CNEP1R1-202ENST00000427478 LOC389332A0A1B0GUA5 103 aa16.25■□□□□ 0.19
CNEP1R1-202ENST00000427478 A0A1W2PRX2 142 aa16.25■□□□□ 0.19
CNEP1R1-202ENST00000427478 PRSS3P2Q8NHM4 247 aa16.25■□□□□ 0.19
CNEP1R1-202ENST00000427478 CD28P10747 220 aa16.25■□□□□ 0.19
CNEP1R1-202ENST00000427478 EBLN2Q6P2I7 272 aa16.25■□□□□ 0.19
CNEP1R1-202ENST00000427478 ANK3Q12955 4377 aaKnown RBP16.25■□□□□ 0.19
CNEP1R1-202ENST00000427478 S100A4P26447 101 aaKnown RBP16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 IFI27P40305 119 aaPredicted RBP16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 ASIPP42127 132 aa16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 TEX43Q6ZNM6 134 aa16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 FA2HQ7L5A8 372 aa16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 NPYP01303 97 aa16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 EVI2AP22794 236 aa16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 CACNG7P62955 275 aa16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 AP5S1Q9NUS5 200 aa16.24■□□□□ 0.19
CNEP1R1-202ENST00000427478 SPRY2O43597 315 aa16.23■□□□□ 0.19
CNEP1R1-202ENST00000427478 ZNF418Q8TF45 676 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-202ENST00000427478 SIGLEC8Q9NYZ4 499 aa16.23■□□□□ 0.19
CNEP1R1-202ENST00000427478 IGHV4-4A0A075B6R2 117 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 GNRH2O43555 120 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 TDRG1Q3Y452 100 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 LINC01006Q8NI28 216 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 RAX2Q96IS3 184 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 GAS8-AS1O95177 125 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 LEPP41159 167 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 SMIM15Q7Z3B0 74 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 ODF3Q96PU9 254 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 TMEM160Q9NX00 188 aa16.22■□□□□ 0.19
CNEP1R1-202ENST00000427478 TRAV12-3A0A0B4J271 114 aa16.21■□□□□ 0.19
CNEP1R1-202ENST00000427478 LEPROTL1O95214 131 aa16.21■□□□□ 0.19
CNEP1R1-202ENST00000427478 LINC00173Q6ZV60 143 aa16.21■□□□□ 0.19
CNEP1R1-202ENST00000427478 DYNLRB2Q8TF09 96 aa16.21■□□□□ 0.19
CNEP1R1-202ENST00000427478 AGRNO00468 2067 aa16.21■□□□□ 0.19
CNEP1R1-202ENST00000427478 BTF3P20290 206 aaKnown RBP16.21■□□□□ 0.18
CNEP1R1-202ENST00000427478 DDTP30046 118 aa16.21■□□□□ 0.18
CNEP1R1-202ENST00000427478 HILS1P60008 231 aa16.21■□□□□ 0.18
CNEP1R1-202ENST00000427478 TMEM61Q8N0U2 210 aa16.21■□□□□ 0.18
CNEP1R1-202ENST00000427478 C16orf95Q9H693 158 aa16.21■□□□□ 0.18
CNEP1R1-202ENST00000427478 HECTD1Q9ULT8 2610 aa16.2■□□□□ 0.18
CNEP1R1-202ENST00000427478 C7orf71A4D174 169 aa16.2■□□□□ 0.18
CNEP1R1-202ENST00000427478 M0R381 172 aa16.2■□□□□ 0.18
CNEP1R1-202ENST00000427478 FOXI2Q6ZQN5 318 aa16.2■□□□□ 0.18
CNEP1R1-202ENST00000427478 CITED2Q99967 270 aaPredicted RBP16.2■□□□□ 0.18
CNEP1R1-202ENST00000427478 TRAV12-2A0A075B6T6 113 aa16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 PPBPP02775 128 aa16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 PHLDA3Q9Y5J5 127 aa16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 DUSP14O95147 198 aaKnown RBP16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 LY6G6DO95868 133 aa16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 FAM159AQ6UWV7 190 aa16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 VAMP8Q9BV40 100 aa16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 PAM16Q9Y3D7 125 aa16.19■□□□□ 0.18
CNEP1R1-202ENST00000427478 RNASE3P12724 160 aaKnown RBP16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 SPINK13Q1W4C9 94 aa16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 KIR2DL5BA0A0G2JN68 375 aa16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 KIR2DL5BA0A0G2JPC4 375 aa16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 TCF21O43680 179 aa16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 MED14OSP0DP75 135 aa16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 GATA1P15976 413 aaPredicted RBP16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 DEFB131AP59861 70 aa16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 KIR2DL5AQ8N109 375 aa16.18■□□□□ 0.18
CNEP1R1-202ENST00000427478 CDKN1BP46527 198 aa16.17■□□□□ 0.18
CNEP1R1-202ENST00000427478 FHL3Q13643 280 aa16.17■□□□□ 0.18
CNEP1R1-202ENST00000427478 TMEM70Q9BUB7 260 aa16.17■□□□□ 0.18
CNEP1R1-202ENST00000427478 SCRT2Q9NQ03 307 aa16.17■□□□□ 0.18
CNEP1R1-202ENST00000427478 NF1P21359 2839 aa16.17■□□□□ 0.18
CNEP1R1-202ENST00000427478 KNCNA6PVL3 124 aa16.16■□□□□ 0.18
CNEP1R1-202ENST00000427478 CCL24O00175 119 aa16.16■□□□□ 0.18
CNEP1R1-202ENST00000427478 TNFRSF6BO95407 300 aa16.16■□□□□ 0.18
CNEP1R1-202ENST00000427478 SPATA12Q7Z6I5 190 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms