RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PHLDA1Q8WV24 401 aaPredicted RBP17.42■□□□□ 0.38
VEGFA-209ENST00000425836 KCNS1Q96KK3 526 aa17.42■□□□□ 0.38
VEGFA-209ENST00000425836 MDFICQ9P1T7 246 aa17.42■□□□□ 0.38
VEGFA-209ENST00000425836 TRGV11A0A075B6L2 103 aa17.41■□□□□ 0.38
VEGFA-209ENST00000425836 TCL1AP56279 114 aa17.41■□□□□ 0.38
VEGFA-209ENST00000425836 IFITM2Q01629 132 aa17.41■□□□□ 0.38
VEGFA-209ENST00000425836 ZNF674Q2M3X9 581 aa17.41■□□□□ 0.38
VEGFA-209ENST00000425836 CENPWQ5EE01 88 aa17.41■□□□□ 0.38
VEGFA-209ENST00000425836 SH2D1AO60880 128 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 TYMSP04818 313 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 DAD1P61803 113 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 FAM162BQ5T6X4 162 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 SDF2L1Q9HCN8 221 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 TMEM250H0YL14 139 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 DEFB130BP0DP73 79 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 DEFB130AP0DP74 79 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 ZNF415Q09FC8 603 aa17.4■□□□□ 0.38
VEGFA-209ENST00000425836 IGKV3D-20A0A0C4DH25 116 aa17.39■□□□□ 0.37
VEGFA-209ENST00000425836 IGHV3-16A0A0C4DH30 117 aa17.39■□□□□ 0.37
VEGFA-209ENST00000425836 CEMP1Q6PRD7 247 aaPredicted RBP17.39■□□□□ 0.37
VEGFA-209ENST00000425836 TRBV20OR9-2A0A075B6H5 130 aa17.38■□□□□ 0.37
VEGFA-209ENST00000425836 IGLV2-8P01709 118 aa17.38■□□□□ 0.37
VEGFA-209ENST00000425836 LINC00612Q8N6U2 182 aa17.38■□□□□ 0.37
VEGFA-209ENST00000425836 NDUFS6O75380 124 aaKnown RBP17.37■□□□□ 0.37
VEGFA-209ENST00000425836 GNG4P50150 75 aa17.37■□□□□ 0.37
VEGFA-209ENST00000425836 TRAV10A0A0B4J240 114 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 NUPR2A6NF83 97 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 RAB14P61106 215 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 Q6ZTI0 123 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 STARD9Q9P2P6 4700 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 SPINK4O60575 86 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 ORM1P02763 201 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 PARLQ9H300 379 aa17.36■□□□□ 0.37
VEGFA-209ENST00000425836 GAGE12BA1L429 117 aa17.35■□□□□ 0.37
VEGFA-209ENST00000425836 GAGE7O76087 117 aa17.35■□□□□ 0.37
VEGFA-209ENST00000425836 SRP19P09132 144 aaKnown RBP17.35■□□□□ 0.37
VEGFA-209ENST00000425836 GAGE12FP0CL80 117 aa17.35■□□□□ 0.37
VEGFA-209ENST00000425836 GAGE12GP0CL81 117 aa17.35■□□□□ 0.37
VEGFA-209ENST00000425836 GAGE12IP0CL82 117 aa17.35■□□□□ 0.37
VEGFA-209ENST00000425836 SMIM12Q96EX1 92 aa17.35■□□□□ 0.37
VEGFA-209ENST00000425836 DEFB131BA0A096LNP1 70 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 TRGV1A0A0A0MS02 117 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 PGPEP1LA6NFU8 196 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 B4DEV8 164 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 KRBOX1C9JBD0 128 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 M0R036 132 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 CEBPGP53567 150 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 PRR27Q6MZM9 219 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 SPXQ9BT56 116 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 CSMD3Q7Z407 3707 aa17.34■□□□□ 0.37
VEGFA-209ENST00000425836 LINC01559Q495D7 138 aa17.33■□□□□ 0.37
VEGFA-209ENST00000425836 ZNF575Q86XF7 245 aa17.33■□□□□ 0.37
VEGFA-209ENST00000425836 MRPL16Q9NX20 251 aaKnown RBP17.33■□□□□ 0.37
VEGFA-209ENST00000425836 C9JCJ5 164 aa17.32■□□□□ 0.36
VEGFA-209ENST00000425836 MGST1P10620 155 aaKnown RBP17.32■□□□□ 0.36
VEGFA-209ENST00000425836 SRSF3P84103 164 aaKnown RBP17.32■□□□□ 0.36
VEGFA-209ENST00000425836 LGALS9BQ3B8N2 356 aa17.32■□□□□ 0.36
VEGFA-209ENST00000425836 C9JQL5 133 aa17.32■□□□□ 0.36
VEGFA-209ENST00000425836 CLLU1Q5K131 121 aa17.32■□□□□ 0.36
VEGFA-209ENST00000425836 KLK5Q9Y337 293 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-209ENST00000425836 DYNC2H1Q8NCM8 4307 aaKnown RBP17.31■□□□□ 0.36
VEGFA-209ENST00000425836 HTN3P15516 51 aa17.31■□□□□ 0.36
VEGFA-209ENST00000425836 PEA15Q15121 130 aa17.31■□□□□ 0.36
VEGFA-209ENST00000425836 RNASE3P12724 160 aaKnown RBP17.3■□□□□ 0.36
VEGFA-209ENST00000425836 C9orf85Q96MD7 179 aa17.3■□□□□ 0.36
VEGFA-209ENST00000425836 TMSB15BA0A087X1C1 80 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 GRIFINA4D1Z8 144 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 M0R2P5 195 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 ATP5G1P05496 136 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 ASIPP42127 132 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 OCC1Q8TAD7 63 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 RASL10AQ92737 203 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 C18orf15Q96N68 181 aa17.29■□□□□ 0.36
VEGFA-209ENST00000425836 TRGV2A0A075B6R0 118 aa17.28■□□□□ 0.36
VEGFA-209ENST00000425836 S100A4P26447 101 aaKnown RBP17.28■□□□□ 0.36
VEGFA-209ENST00000425836 SMDT1Q9H4I9 107 aa17.28■□□□□ 0.36
VEGFA-209ENST00000425836 RPL19P84098 196 aaKnown RBP17.28■□□□□ 0.36
VEGFA-209ENST00000425836 OR5I1Q13606 314 aa17.28■□□□□ 0.36
VEGFA-209ENST00000425836 DNLZQ5SXM8 178 aa17.28■□□□□ 0.36
VEGFA-209ENST00000425836 BIN3Q9NQY0 253 aa17.28■□□□□ 0.36
VEGFA-209ENST00000425836 C19orf71A6NCJ1 209 aa17.27■□□□□ 0.35
VEGFA-209ENST00000425836 IGLL5B9A064 214 aa17.27■□□□□ 0.35
VEGFA-209ENST00000425836 K7EN84 100 aa17.27■□□□□ 0.35
VEGFA-209ENST00000425836 DAZAP1Q96EP5 407 aaKnown RBP17.27■□□□□ 0.35
VEGFA-209ENST00000425836 SMIM7Q9BQ49 75 aa17.27■□□□□ 0.35
VEGFA-209ENST00000425836 PLECQ15149 4684 aaKnown RBP17.25■□□□□ 0.35
VEGFA-209ENST00000425836 ZNF727A8MUV8 499 aa17.25■□□□□ 0.35
VEGFA-209ENST00000425836 F5H768 121 aa17.25■□□□□ 0.35
VEGFA-209ENST00000425836 IL36BQ9NZH7 164 aa17.25■□□□□ 0.35
VEGFA-209ENST00000425836 ARMS2P0C7Q2 107 aa17.24■□□□□ 0.35
VEGFA-209ENST00000425836 LY96Q9Y6Y9 160 aa17.24■□□□□ 0.35
VEGFA-209ENST00000425836 H3BVH4 76 aa17.23■□□□□ 0.35
VEGFA-209ENST00000425836 ZNF876PQ49A33 203 aa17.23■□□□□ 0.35
VEGFA-209ENST00000425836 IGHV4-4A0A075B6R2 117 aa17.23■□□□□ 0.35
VEGFA-209ENST00000425836 CXCL1P09341 107 aa17.23■□□□□ 0.35
VEGFA-209ENST00000425836 HOXA5P20719 270 aa17.23■□□□□ 0.35
VEGFA-209ENST00000425836 PTH2Q96A98 100 aa17.23■□□□□ 0.35
VEGFA-209ENST00000425836 P01737 135 aa17.22■□□□□ 0.35
VEGFA-209ENST00000425836 NUDT10Q8NFP7 164 aa17.22■□□□□ 0.35
VEGFA-209ENST00000425836 NUDT11Q96G61 164 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms