RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 IGLV3-27P01718 113 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 P04436 131 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 CRYGAP11844 174 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 HLA-DRB4P13762 266 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 NCBP2P52298 156 aaKnown RBP eCLIP1.99□□□□□ -2.09
LINC01040-201ENST00000425048 FBXW4P57775 412 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 KLRB1Q12918 225 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 TAL2Q16559 108 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 ABCA11PQ4W5N1 156 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 TMEM14EPQ6UXP3 125 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 ZNF493Q6ZR52 646 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 MOB3BQ86TA1 216 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 ANKRD29Q8N6D5 301 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 C15orf53Q8NAA6 179 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 UBALD1Q8TB05 177 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 MYOZ3Q8TDC0 251 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 DEFB118Q96PH6 123 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 HDHD3Q9BSH5 251 aaPredicted RBP1.99□□□□□ -2.09
LINC01040-201ENST00000425048 CHAC1Q9BUX1 264 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 AICDAQ9GZX7 198 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 NHP2Q9NX24 153 aaKnown RBP1.99□□□□□ -2.09
LINC01040-201ENST00000425048 B9D1Q9UPM9 204 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 TP53TG1Q9Y2A0 90 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 HLA-DRB4X5D2U9 266 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 COL4A6Q14031 1691 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 GPR179Q6PRD1 2367 aa1.99□□□□□ -2.09
LINC01040-201ENST00000425048 MUC22E2RYF6 1773 aaPredicted RBP1.98□□□□□ -2.09
LINC01040-201ENST00000425048 IGKV1D-42A0A075B6H8 117 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 IGKV2D-26A0A0A0MRZ7 120 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 TMED7-TICAM2A0A0A6YYA0 188 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 IGLV1-36A0A0B4J1U3 117 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 A0A0D9SEW6 157 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FAM236DA0A1B0GTK5 79 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 TEX50A0A1B0GTY4 177 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 UBE2L5PA0A1B0GUS4 154 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 TMEM89A2RUT3 159 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 C4orf51C9J302 202 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 J3QQQ9 107 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 K7EMI3 77 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 MPDU1O75352 247 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 ATP5LO75964 103 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 CD7P09564 240 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FAM236CP0DP71 79 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 MGST1P10620 155 aaKnown RBP1.98□□□□□ -2.09
LINC01040-201ENST00000425048 DEFA4P12838 97 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 COX5AP20674 150 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 HLA-DMBP28068 263 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 SSR2P43308 183 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 EMDP50402 254 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 EFNA4P52798 201 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FOXA3P55318 350 aaPredicted RBP1.98□□□□□ -2.09
LINC01040-201ENST00000425048 TMEM258P61165 79 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 RPL30P62888 115 aaKnown RBP1.98□□□□□ -2.09
LINC01040-201ENST00000425048 TFF3Q07654 80 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FAM53BQ14153 422 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 HES1Q14469 280 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FXYD3Q14802 87 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 CENPWQ5EE01 88 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 KLF17Q5JT82 389 aaPredicted RBP1.98□□□□□ -2.09
LINC01040-201ENST00000425048 C1orf195Q5TG92 126 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 Q6ZSR3 168 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FAM231DQ6ZW35 169 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 MARCH3Q86UD3 253 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 C10orf126Q8N4M7 172 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FAM57AQ8TBR7 257 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FGF14Q92915 247 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 FAM19A4Q96LR4 140 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 IGF2BP2-AS1Q96M15 143 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 TMEM147Q9BVK8 224 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 CYSTM1Q9H1C7 97 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 C16orf95Q9H693 158 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 PSENENQ9NZ42 101 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 HHLA3Q9XRX5 114 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 PKIGQ9Y2B9 76 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 F11RQ9Y624 299 aaKnown RBP1.98□□□□□ -2.09
LINC01040-201ENST00000425048 ALPK2Q86TB3 2170 aa1.98□□□□□ -2.09
LINC01040-201ENST00000425048 TRBV25-1A0A075B6N4 114 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 IGKV1-9A0A0C4DH69 117 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 C5orf49A4QMS7 147 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 C19orf71A6NCJ1 209 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 A8MWV9 139 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 SYNGR2O43760 224 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 TCL1BO95988 128 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 LTAP01374 205 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 IGKV1-39P01597 117 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 IGKV1D-39P04432 117 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 ARL14EPLP0DKL9 152 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 IAPPP10997 89 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 COX7CP15954 63 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 CCL1P22362 96 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 COX7A1P24310 79 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 COL8A2P25067 703 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 GCHFRP30047 84 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 PRDX2P32119 198 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 PFN2P35080 140 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 RPL13AP40429 203 aaKnown RBP1.97□□□□□ -2.09
LINC01040-201ENST00000425048 FXYD4P59646 89 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 HBG1P69891 147 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 HBG2P69892 147 aa1.97□□□□□ -2.09
LINC01040-201ENST00000425048 PLGLB1Q02325 96 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms