RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 IGHV3-11P01762 117 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 RNF224P0DH78 156 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 C1orf159Q96HA4 380 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 ARHGEF17Q96PE2 2063 aaPredicted RBP5.54□□□□□ -1.52
ALMS1-201ENST00000423048 TINCRA0A1B0GVN0 87 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 IGHV3-23P01764 117 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 RBMY1FQ15415 496 aaKnown RBP5.54□□□□□ -1.52
ALMS1-201ENST00000423048 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 CTSZQ9UBR2 303 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 TPRP12270 2363 aaKnown RBP5.54□□□□□ -1.52
ALMS1-201ENST00000423048 LY6LH3BQJ8 138 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 EREGO14944 169 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 PAX4O43316 350 aa5.54□□□□□ -1.52
ALMS1-201ENST00000423048 CEP290O15078 2479 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 SPINK8P0C7L1 97 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 C14orf177Q52M58 125 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 TCTEX1D4Q5JR98 221 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 DEFB131AP59861 70 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 PATE2Q6UY27 113 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 MRPL35Q9NZE8 188 aaKnown RBP5.53□□□□□ -1.52
ALMS1-201ENST00000423048 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 IGHV3-48P01763 117 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 SNRPCP09234 159 aaKnown RBP5.53□□□□□ -1.52
ALMS1-201ENST00000423048 C15orf53Q8NAA6 179 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 ZNRD1Q9P1U0 126 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 PRSS29PA6NIE9 313 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 K7EQD1 137 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 ZNF524Q96C55 264 aa5.53□□□□□ -1.52
ALMS1-201ENST00000423048 IGHV4OR15-8A0A075B7B6 117 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 A0A087WW49 117 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 TRBV10-2A0A0K0K1G8 114 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 TMEM213A2RRL7 107 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 EGR2P11161 476 aaPredicted RBP5.52□□□□□ -1.53
ALMS1-201ENST00000423048 CYYR1Q96J86 154 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 IGLL5B9A064 214 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
ALMS1-201ENST00000423048 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 LRRK1Q38SD2 2015 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 IGHV3OR16-12A0A075B7B8 117 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 LYRM9A8MSI8 78 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 CDK2AP2O75956 126 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 GNLYP22749 145 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 TMEM258P61165 79 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 FAM110AQ9BQ89 295 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 DOCK8Q8NF50 2099 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 C9JAW5 83 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 DAD1P61803 113 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 DEFB113Q30KQ7 82 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 SP5Q6BEB4 398 aaPredicted RBP5.52□□□□□ -1.53
ALMS1-201ENST00000423048 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
ALMS1-201ENST00000423048 CD33P20138 364 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 CHCHD7Q9BUK0 85 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 IGHV4-39P01824 125 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 TRACP01848 142 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 DUX4L9Q6RFH8 374 aaPredicted RBP5.51□□□□□ -1.53
ALMS1-201ENST00000423048 Q8TAT8 98 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 VSIG2Q96IQ7 327 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 PPDPFQ9H3Y8 114 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 Q8N6K4 173 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 TMEM263Q8WUH6 116 aaKnown RBP5.51□□□□□ -1.53
ALMS1-201ENST00000423048 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 PRORYQ9H606 182 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 MRPL36Q9P0J6 103 aaKnown RBP5.51□□□□□ -1.53
ALMS1-201ENST00000423048 ZNF318Q5VUA4 2279 aa5.51□□□□□ -1.53
ALMS1-201ENST00000423048 TRAV8-1A0A0A6YYK1 113 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 IGHV3-66A0A0C4DH42 116 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 FGF6P10767 208 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 DYNAPQ8N1N2 210 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 ZNF503Q96F45 646 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 ZNF581Q9P0T4 197 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 SPINK2P20155 84 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 TDRG1Q3Y452 100 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 MORN5Q5VZ52 161 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 ICOSQ9Y6W8 199 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 NCKAP5O14513 1909 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 C20orf203Q8NBC4 194 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 IGHV3OR16-10A0A075B7F0 116 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 A0A1W2PRX2 142 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 SYNJ2BPP57105 145 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 LINC00643Q86TS7 51 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 CCDC140Q96MF4 163 aa5.5□□□□□ -1.53
ALMS1-201ENST00000423048 IGKV1D-37A0A075B6S9 117 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 HOXD3P31249 432 aaPredicted RBP5.49□□□□□ -1.53
ALMS1-201ENST00000423048 ODF1Q14990 250 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 LINC01620Q4KN68 170 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 CRIP3Q6Q6R5 217 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 Q6Q795 121 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 NDUFA11Q86Y39 141 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 SPATA25Q9BR10 227 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 TP53BP1Q12888 1972 aaPredicted RBP5.49□□□□□ -1.53
ALMS1-201ENST00000423048 GAGE12JA6NER3 117 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 CRLF1O75462 422 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 GAGE7O76087 117 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 GAGE12FP0CL80 117 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 GAGE12GP0CL81 117 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 GAGE12IP0CL82 117 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 GAGE4Q13068 117 aa5.49□□□□□ -1.53
ALMS1-201ENST00000423048 Q96MF0 132 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms