RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 RAB19A4D1S5 217 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 PFN1P07737 140 aaKnown RBP6.63□□□□□ -1.35
PDGFC-202ENST00000422544 SPART-AS1P0CW21 52 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 CRIP1P50238 77 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 IFITM2Q01629 132 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 ANXA2RQ3ZCQ2 193 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 TOR2AQ5JU69 321 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 ZNF506Q5JVG8 444 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 ZFAND6Q6FIF0 208 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 FAM159AQ6UWV7 190 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 ZNF493Q6ZR52 646 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 ZNF767PQ75MW2 155 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 TMEM183AQ8IXX5 376 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 MUC7Q8TAX7 377 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 TMEM263Q8WUH6 116 aaKnown RBP6.63□□□□□ -1.35
PDGFC-202ENST00000422544 ZC2HC1AQ96GY0 325 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 FAM210AQ96ND0 272 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 EIF5A2Q9GZV4 153 aaKnown RBP6.63□□□□□ -1.35
PDGFC-202ENST00000422544 NOP10Q9NPE3 64 aaKnown RBP6.63□□□□□ -1.35
PDGFC-202ENST00000422544 C11orf21Q9P2W6 132 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 DKK2Q9UBU2 259 aa6.63□□□□□ -1.35
PDGFC-202ENST00000422544 FABP5P3A8MUU1 101 aa6.62□□□□□ -1.35
PDGFC-202ENST00000422544 GNRH2O43555 120 aa6.62□□□□□ -1.35
PDGFC-202ENST00000422544 RAB14P61106 215 aa6.62□□□□□ -1.35
PDGFC-202ENST00000422544 C12orf74Q32Q52 190 aa6.62□□□□□ -1.35
PDGFC-202ENST00000422544 COX8CQ7Z4L0 72 aa6.62□□□□□ -1.35
PDGFC-202ENST00000422544 GSN-AS1Q9NRJ2 163 aa6.62□□□□□ -1.35
PDGFC-202ENST00000422544 MDFICQ9P1T7 246 aa6.62□□□□□ -1.35
PDGFC-202ENST00000422544 TIMM8BQ9Y5J9 83 aaPredicted RBP6.62□□□□□ -1.35
PDGFC-202ENST00000422544 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
PDGFC-202ENST00000422544 SNURFLB1AK76 121 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 SH2D1AO60880 128 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 DEFB130BP0DP73 79 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 DEFB130AP0DP74 79 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 CEBPGP53567 150 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 TDRG1Q3Y452 100 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 CENPWQ5EE01 88 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 C11orf72Q8NBR9 251 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
PDGFC-202ENST00000422544 TRGV11A0A075B6L2 103 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 IGKV3D-20A0A0C4DH25 116 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 IGHV3-16A0A0C4DH30 117 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 LYRM9A8MSI8 78 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 TMEM250H0YL14 139 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 ORM1P02763 201 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 TYMSP04818 313 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 GNG4P50150 75 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 SRSF3P84103 164 aaKnown RBP6.6□□□□□ -1.35
PDGFC-202ENST00000422544 ZNF674Q2M3X9 581 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 IBA57Q5T440 356 aaKnown RBP6.6□□□□□ -1.35
PDGFC-202ENST00000422544 FAM162BQ5T6X4 162 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 Q6ZTC4 211 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 PHLDA1Q8WV24 401 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-202ENST00000422544 KCNS1Q96KK3 526 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 SDF2L1Q9HCN8 221 aa6.6□□□□□ -1.35
PDGFC-202ENST00000422544 TRBV20OR9-2A0A075B6H5 130 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 TEX48A0A1B0GUV7 120 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 GAGE12BA1L429 117 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 PGPEP1LA6NFU8 196 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 C9JQL5 133 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 C3orf84H3BNL1 204 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 M0R036 132 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 GAGE7O76087 117 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 SRP19P09132 144 aaKnown RBP6.59□□□□□ -1.35
PDGFC-202ENST00000422544 GAGE12FP0CL80 117 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 GAGE12GP0CL81 117 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 GAGE12IP0CL82 117 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 MGST1P10620 155 aaKnown RBP6.59□□□□□ -1.35
PDGFC-202ENST00000422544 TCL1AP56279 114 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 DAD1P61803 113 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 ZNF415Q09FC8 603 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 DAZ2Q13117 558 aaKnown RBP6.59□□□□□ -1.35
PDGFC-202ENST00000422544 PEA15Q15121 130 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 PRR27Q6MZM9 219 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 PARLQ9H300 379 aa6.59□□□□□ -1.35
PDGFC-202ENST00000422544 TMSB15BA0A087X1C1 80 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 TRGV1A0A0A0MS02 117 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 B4DEV8 164 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 KRBOX1C9JBD0 128 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 SPINK4O60575 86 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 NDUFS6O75380 124 aaKnown RBP6.58□□□□□ -1.36
PDGFC-202ENST00000422544 HTN3P15516 51 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 CLLU1Q5K131 121 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 CEMP1Q6PRD7 247 aaPredicted RBP6.58□□□□□ -1.36
PDGFC-202ENST00000422544 Q6ZTI0 123 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 OCC1Q8TAD7 63 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 MRPL16Q9NX20 251 aaKnown RBP6.58□□□□□ -1.36
PDGFC-202ENST00000422544 DNAH17Q9UFH2 4485 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
PDGFC-202ENST00000422544 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 TRAV10A0A0B4J240 114 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 GRIFINA4D1Z8 144 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 C9JCJ5 164 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 OR5I1Q13606 314 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 ZNF575Q86XF7 245 aa6.57□□□□□ -1.36
PDGFC-202ENST00000422544 LINC00612Q8N6U2 182 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms