RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 GYPEP15421 78 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 GCHFRP30047 84 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 SERF2P84101 59 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 NEGR1Q7Z3B1 354 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 ARL6IP6Q8N6S5 226 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 OR2G3Q8NGZ4 309 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 PCNPQ8WW12 178 aaKnown RBP6.38□□□□□ -1.39
NUP50-206ENST00000422489 RASL10AQ92737 203 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 PSMG3Q9BT73 122 aaPredicted RBP6.38□□□□□ -1.39
NUP50-206ENST00000422489 SH3BGRL3Q9H299 93 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 SDF2L1Q9HCN8 221 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 PSG8Q9UQ74 426 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 DNAH2Q9P225 4427 aa6.38□□□□□ -1.39
NUP50-206ENST00000422489 IGHV3-16A0A0C4DH30 117 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 M0R2P5 195 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 TCRAP04437 139 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 TYMSP04818 313 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 GIPP09681 153 aaPredicted RBP6.37□□□□□ -1.39
NUP50-206ENST00000422489 SRIP30626 198 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 RPL7L1Q6DKI1 246 aaKnown RBP6.37□□□□□ -1.39
NUP50-206ENST00000422489 PRNTQ86SH4 94 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 ASB13Q8WXK3 278 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 KCNS1Q96KK3 526 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 EPDR1Q9UM22 224 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 TNFSF18Q9UNG2 199 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 TNFRSF18Q9Y5U5 241 aa6.37□□□□□ -1.39
NUP50-206ENST00000422489 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 TRAV9-2A0A087WT02 112 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 TRAV4A0A0B4J268 109 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 SERTM2A0A1B0GWG4 89 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 K7EQD1 137 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 TAAR5O14804 337 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 GCGP01275 180 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 IFNA7P01567 189 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 ORM1P02763 201 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 ZNF80P51504 273 aaPredicted RBP6.36□□□□□ -1.39
NUP50-206ENST00000422489 LINC00315P59091 139 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 TDRG1Q3Y452 100 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 C5orf17Q8NAS9 161 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 NHLRC2Q8NBF2 726 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 OR2T35Q8NGX2 323 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 TMEM167BQ9NRX6 74 aa6.36□□□□□ -1.39
NUP50-206ENST00000422489 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 LOC100131303A0A0U1RQF7 123 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 UBE2G2P60604 165 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 FLI1Q01543 452 aaPredicted RBP6.35□□□□□ -1.39
NUP50-206ENST00000422489 ZNF876PQ49A33 203 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 ZFP69Q49AA0 526 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 SMUG1Q53HV7 270 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 SUN5Q8TC36 379 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 LINC00479Q96M42 142 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 TXNDC17Q9BRA2 123 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 C11orf21Q9P2W6 132 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
NUP50-206ENST00000422489 TRAV34A0A0B4J273 112 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 GGTLC3B5MD39 225 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 EREGO14944 169 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 BTF3P20290 206 aaKnown RBP6.34□□□□□ -1.39
NUP50-206ENST00000422489 FGF8P55075 233 aaPredicted RBP6.34□□□□□ -1.39
NUP50-206ENST00000422489 RGS21Q2M5E4 152 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 SAPCD1Q5SSQ6 148 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 AKR1C8PQ5T2L2 129 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 CYB561D1Q8N8Q1 229 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 TMEM75Q8N9X5 138 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 LY96Q9Y6Y9 160 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 FAT2Q9NYQ8 4349 aa6.34□□□□□ -1.39
NUP50-206ENST00000422489 PKD1P98161 4303 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 CTXND1A0A1B0GTU2 59 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 RNF222A6NCQ9 220 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 PGPEP1LA6NFU8 196 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 FBLL1A6NHQ2 334 aaKnown RBP6.33□□□□□ -1.4
NUP50-206ENST00000422489 ARPC5O15511 151 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 PFN1P07737 140 aaKnown RBP6.33□□□□□ -1.4
NUP50-206ENST00000422489 EVI2AP22794 236 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 S100A4P26447 101 aaKnown RBP6.33□□□□□ -1.4
NUP50-206ENST00000422489 PPT1P50897 306 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 ZNF726P1Q15940 193 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 WFDC10BQ8IUB3 73 aa6.33□□□□□ -1.4
NUP50-206ENST00000422489 A0A1W2PRE2 83 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 FABP5P3A8MUU1 101 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 SMLR1H3BR10 107 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 RS1O15537 224 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 GATA1P15976 413 aaPredicted RBP6.32□□□□□ -1.4
NUP50-206ENST00000422489 FUSP35637 526 aaKnown RBP eCLIP6.32□□□□□ -1.4
NUP50-206ENST00000422489 CFAP126Q5VTH2 177 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 DPPA3Q6W0C5 159 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 SH2D6Q7Z4S9 175 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 NFE4Q86UQ8 179 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 MAPKAPK5-AS1Q8N8E1 139 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 PRADC1Q9BSG0 188 aa6.32□□□□□ -1.4
NUP50-206ENST00000422489 PEX7O00628 323 aa6.31□□□□□ -1.4
NUP50-206ENST00000422489 CDK2AP2O75956 126 aa6.31□□□□□ -1.4
NUP50-206ENST00000422489 ERVFC1-1P60608 527 aa6.31□□□□□ -1.4
NUP50-206ENST00000422489 LGALSLQ3ZCW2 172 aaPredicted RBP6.31□□□□□ -1.4
NUP50-206ENST00000422489 Q6ZRN7 208 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms