RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 IGFL4Q6B9Z1 124 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 GFRALQ6UXV0 394 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 BAALCQ8WXS3 180 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 KLK15Q9H2R5 256 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 PRO1854Q9UHT4 67 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 GPR179Q6PRD1 2367 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHV1-3A0A0C4DH29 117 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 C9JAW5 83 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 NDUFB3O43676 98 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 LOXP28300 417 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 FAM159AQ6UWV7 190 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 KLHL30-AS1Q8NEE0 82 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 ONECUT1Q9UBC0 465 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHV3-30P01768 117 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHV3-30-5P0DP03 117 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 CD59P13987 128 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 PRR30Q53SZ7 412 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 DYNAPQ8N1N2 210 aa6.17□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHV4-4A0A075B6R2 117 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 IGHV7-4-1A0A0J9YVY3 117 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 LYPD2Q6UXB3 125 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 C11orf21Q9P2W6 132 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 SMAD5-AS1Q9Y6J3 95 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 S4R3C0 116 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 PRSS33Q8NF86 280 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 IGLV1-47P01700 117 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 CLEC3BP05452 202 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 CRIP2P52943 208 aaPredicted RBP6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 Q6ZQT7 251 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 Q8N1Y9 231 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 ODF3Q96PU9 254 aa6.16□□□□□ -1.42
HMGXB4-202ENST00000418170 ATP1A1-AS1Q5TC04 95 aa6.15□□□□□ -1.42
HMGXB4-202ENST00000418170 OR10J6PQ8NGY7 276 aa6.15□□□□□ -1.42
HMGXB4-202ENST00000418170 SLC50A1Q9BRV3 221 aa6.15□□□□□ -1.42
HMGXB4-202ENST00000418170 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
HMGXB4-202ENST00000418170 LINC01600Q96MT4 127 aa6.15□□□□□ -1.42
HMGXB4-202ENST00000418170 HIF1ANQ9NWT6 349 aa6.15□□□□□ -1.42
HMGXB4-202ENST00000418170 MDFICQ9P1T7 246 aa6.15□□□□□ -1.42
HMGXB4-202ENST00000418170 ZGRF1Q86YA3 2104 aa6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 F8W735 103 aaPredicted RBP6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 TMEM178BH3BS89 294 aa6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 ARL3P36405 182 aa6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 MFAP4P55083 255 aa6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 SUMO2P61956 95 aaKnown RBP6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.43
HMGXB4-202ENST00000418170 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 PRAC2D3DTV9 90 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 Q6ZS46 218 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 C1orf122Q6ZSJ8 110 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 TRPT1Q86TN4 253 aaKnown RBP6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 OTOGLQ3ZCN5 2332 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 BUB1B-PAK6H3BSN5 160 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 MEIG1Q5JSS6 88 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 SPANXN1Q5VSR9 72 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 SEM1Q6ZVN7 128 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 ASCL5Q7RTU5 278 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 RNF5Q99942 180 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 C17orf100A8MU93 164 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 P0DMU3 169 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 FAM231AP0DMU4 169 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 FAM231CP0DMU5 169 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 HERVK_113P61574 105 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 C15orf53Q8NAA6 179 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 LRBAP50851 2863 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 DLX1P56177 255 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 TIMD4Q96H15 378 aa6.14□□□□□ -1.43
HMGXB4-202ENST00000418170 IGLV11-55A0A075B6I3 123 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 TRAV8-4A0A0B4J246 113 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 C11orf86A6NJI1 115 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 IGHV3-33P01772 117 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 CRYGDP07320 174 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 PAPPA-AS1Q5QFB9 102 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 ASH1LQ9NR48 2969 aaKnown RBP6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 IGLV4-69A0A075B6H9 119 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 MBD3L4A6NDZ8 208 aaPredicted RBP6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 MBD3L3A6NE82 208 aaPredicted RBP6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 MBD3L5A6NJ08 208 aaPredicted RBP6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 MBD3L2Q8NHZ7 208 aaPredicted RBP6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 FANCD2OSQ96PS1 177 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 TTC28Q96AY4 2481 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 KAAG1Q9UBP8 84 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 VPREB3Q9UKI3 123 aa6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 HRNRQ86YZ3 2850 aaPredicted RBP6.13□□□□□ -1.43
HMGXB4-202ENST00000418170 NUP37Q8NFH4 326 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 FAM57AQ8TBR7 257 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 CCL17Q92583 94 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 CSMD2Q7Z408 3487 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 TEX49A0A1B0GTD5 131 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 PRB3Q04118 309 aaPredicted RBP6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 MRPL23Q16540 153 aaKnown RBP6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 LINC01620Q4KN68 170 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 AGPAT4-IT1Q9H0P7 198 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 C21orf62Q9NYP8 219 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 RNF223E7ERA6 249 aa6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
HMGXB4-202ENST00000418170 ATXN8Q156A1 80 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms