RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 AZU1P20160 251 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 CDPF1Q6NVV7 123 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 PLXNB3Q9ULL4 1909 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 NPSP0C0P6 89 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 ZNF491Q8N8L2 437 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 ZNRF2Q8NHG8 242 aa12.26□□□□□ -0.45
PHRF1-203ENST00000416188 HIST1H4AP62805 103 aaKnown RBP12.25□□□□□ -0.45
PHRF1-203ENST00000416188 PRR20EP86478 221 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 PRR20CP86479 221 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 PRR20DP86480 221 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 PRR20BP86481 221 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 PRR20AP86496 221 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 IL15RAQ13261 267 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 ALPK3Q96L96 1907 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 THAP8Q8NA92 274 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 ABCA2Q9BZC7 2435 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 TLN1Q9Y490 2541 aaKnown RBP12.25□□□□□ -0.45
PHRF1-203ENST00000416188 I3L3M4 83 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 Q6ZWC4 215 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 Q8NFD4 153 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
PHRF1-203ENST00000416188 VWC2LB2RUY7 222 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 PCDH15Q96QU1 1955 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 MRPL52Q86TS9 123 aaKnown RBP12.24□□□□□ -0.45
PHRF1-203ENST00000416188 SMIM27A0A1W2PRY6 76 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 C9JAW5 83 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 PMVKQ15126 192 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 IGHV7-4-1A0A0J9YVY3 117 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 GP9P14770 177 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 C11orf52Q96A22 123 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 FGF23Q9GZV9 251 aaPredicted RBP12.24□□□□□ -0.45
PHRF1-203ENST00000416188 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 DNAJC9-AS1A6NH13 148 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 IGHV4-31P0DP07 118 aa12.24□□□□□ -0.45
PHRF1-203ENST00000416188 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 NPYP01303 97 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 PFN2P35080 140 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 SLURP1P55000 103 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 MSMPQ1L6U9 139 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 SIGLEC8Q9NYZ4 499 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 IGHV1-24A0A0C4DH33 117 aa12.23□□□□□ -0.45
PHRF1-203ENST00000416188 CEP295Q9C0D2 2601 aa12.22□□□□□ -0.45
PHRF1-203ENST00000416188 TMEM141Q96I45 108 aa12.22□□□□□ -0.45
PHRF1-203ENST00000416188 F6UB75 175 aa12.22□□□□□ -0.45
PHRF1-203ENST00000416188 KRTAP27-1Q3LI81 207 aa12.22□□□□□ -0.45
PHRF1-203ENST00000416188 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.45
PHRF1-203ENST00000416188 IGLC2P0DOY2 106 aa12.21□□□□□ -0.45
PHRF1-203ENST00000416188 IGLC3P0DOY3 106 aa12.21□□□□□ -0.45
PHRF1-203ENST00000416188 LMO4P61968 165 aa12.21□□□□□ -0.46
PHRF1-203ENST00000416188 GAGE6Q13070 117 aa12.21□□□□□ -0.46
PHRF1-203ENST00000416188 ZFAND6Q6FIF0 208 aa12.21□□□□□ -0.46
PHRF1-203ENST00000416188 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.46
PHRF1-203ENST00000416188 MRPL35Q9NZE8 188 aaKnown RBP12.21□□□□□ -0.46
PHRF1-203ENST00000416188 LY6G6DO95868 133 aa12.2□□□□□ -0.46
PHRF1-203ENST00000416188 HLA-DRB4P13762 266 aa12.2□□□□□ -0.46
PHRF1-203ENST00000416188 ADAMTSL5Q6ZMM2 481 aa12.2□□□□□ -0.46
PHRF1-203ENST00000416188 HLA-DRB4X5D2U9 266 aa12.2□□□□□ -0.46
PHRF1-203ENST00000416188 EML6Q6ZMW3 1958 aa12.2□□□□□ -0.46
PHRF1-203ENST00000416188 TMEM131Q92545 1883 aa12.2□□□□□ -0.46
PHRF1-203ENST00000416188 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 ZNF561-AS1K7EIQ3 104 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 IGLL1P15814 213 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 C22orf34Q6ZV56 151 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 Q8N7P7 452 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 ZNF48Q96MX3 618 aaPredicted RBP12.19□□□□□ -0.46
PHRF1-203ENST00000416188 TMEM243Q9BU79 118 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 SIRPDQ9H106 197 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 FREM1Q5H8C1 2179 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 F8WEM9 126 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 VWC2Q2TAL6 325 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 DYNAPQ8N1N2 210 aa12.19□□□□□ -0.46
PHRF1-203ENST00000416188 K7EN84 100 aa12.18□□□□□ -0.46
PHRF1-203ENST00000416188 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
PHRF1-203ENST00000416188 NXPH4O95158 308 aa12.18□□□□□ -0.46
PHRF1-203ENST00000416188 MYCNOSP40205 109 aa12.18□□□□□ -0.46
PHRF1-203ENST00000416188 GAGE2AQ6NT46 116 aa12.18□□□□□ -0.46
PHRF1-203ENST00000416188 CITED2Q99967 270 aaPredicted RBP12.18□□□□□ -0.46
PHRF1-203ENST00000416188 OVOL2Q9BRP0 275 aa12.18□□□□□ -0.46
PHRF1-203ENST00000416188 CEP192Q8TEP8 1941 aa12.18□□□□□ -0.46
PHRF1-203ENST00000416188 A0A096LPF7 62 aa12.17□□□□□ -0.46
PHRF1-203ENST00000416188 C5orf56Q8N8D9 126 aa12.17□□□□□ -0.46
PHRF1-203ENST00000416188 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
PHRF1-203ENST00000416188 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
PHRF1-203ENST00000416188 NDUFA12Q9UI09 145 aa12.17□□□□□ -0.46
PHRF1-203ENST00000416188 LGALS9BQ3B8N2 356 aa12.17□□□□□ -0.46
PHRF1-203ENST00000416188 LGALS9CQ6DKI2 356 aa12.17□□□□□ -0.46
PHRF1-203ENST00000416188 GNRH2O43555 120 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 LTAP01374 205 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 NPBQ8NG41 125 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 KLF12Q9Y4X4 402 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 SPRY2O43597 315 aa12.16□□□□□ -0.46
PHRF1-203ENST00000416188 EGR2P11161 476 aaPredicted RBP12.16□□□□□ -0.46
PHRF1-203ENST00000416188 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms