RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 GLMPQ8WWB7 406 aa7.49□□□□□ -1.21
SS18-203ENST00000415083 BPESC1Q9GZL8 116 aa7.49□□□□□ -1.21
SS18-203ENST00000415083 IGHV3OR16-10A0A075B7F0 116 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 Q6ZS46 218 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 ZFAND2AQ8N6M9 145 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 FOXC2Q99958 501 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 TMEM160Q9NX00 188 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 NHP2Q9NX24 153 aaKnown RBP7.48□□□□□ -1.21
SS18-203ENST00000415083 MRPL35Q9NZE8 188 aaKnown RBP7.48□□□□□ -1.21
SS18-203ENST00000415083 MXRA5Q9NR99 2828 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 NCOR2Q9Y618 2525 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 TRAV40A0A0B4J280 105 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 FABP2P12104 132 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 NEGR1Q7Z3B1 354 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 SPTAN1Q13813 2472 aaKnown RBP7.48□□□□□ -1.21
SS18-203ENST00000415083 NBPF19A0A087WUL8 3843 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 TEX48A0A1B0GUV7 120 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 SMIM17P0DL12 118 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 LCNL1Q6ZST4 164 aa7.48□□□□□ -1.21
SS18-203ENST00000415083 SMIM13P0DJ93 91 aa7.47□□□□□ -1.21
SS18-203ENST00000415083 FAM19A4Q96LR4 140 aa7.47□□□□□ -1.21
SS18-203ENST00000415083 OR4X2Q8NGF9 303 aa7.47□□□□□ -1.21
SS18-203ENST00000415083 RASL10AQ92737 203 aa7.47□□□□□ -1.21
SS18-203ENST00000415083 GTSF1LQ9H1H1 148 aa7.47□□□□□ -1.21
SS18-203ENST00000415083 NXT2Q9NPJ8 142 aaKnown RBP7.47□□□□□ -1.21
SS18-203ENST00000415083 H3BVH4 76 aa7.46□□□□□ -1.21
SS18-203ENST00000415083 IGKCP01834 107 aa7.46□□□□□ -1.21
SS18-203ENST00000415083 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.21
SS18-203ENST00000415083 S100A7AQ86SG5 101 aa7.46□□□□□ -1.21
SS18-203ENST00000415083 SLC50A1Q9BRV3 221 aa7.46□□□□□ -1.21
SS18-203ENST00000415083 F6UB75 175 aa7.46□□□□□ -1.22
SS18-203ENST00000415083 NPFFO15130 113 aa7.46□□□□□ -1.22
SS18-203ENST00000415083 AMTNQ6UX39 209 aa7.46□□□□□ -1.22
SS18-203ENST00000415083 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
SS18-203ENST00000415083 CHAC1Q9BUX1 264 aa7.46□□□□□ -1.22
SS18-203ENST00000415083 COL25A1Q9BXS0 654 aaPredicted RBP7.46□□□□□ -1.22
SS18-203ENST00000415083 HIGD1BQ9P298 99 aa7.46□□□□□ -1.22
SS18-203ENST00000415083 J3KRW8 73 aa7.46□□□□□ -1.22
SS18-203ENST00000415083 KLRB1Q12918 225 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 DEFB104AQ8WTQ1 72 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 KLK15Q9H2R5 256 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 WFDC2Q14508 124 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 UBTD1Q9HAC8 227 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 UFC1Q9Y3C8 167 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 TRBV7-1A0A0A6YYK4 115 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 PRSS29PA6NIE9 313 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 SMAGPQ0VAQ4 97 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 BRD3OSQ6XYD6 125 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 EEF1AKMT3Q96AZ1 226 aa7.45□□□□□ -1.22
SS18-203ENST00000415083 MRPL53Q96EL3 112 aaKnown RBP7.45□□□□□ -1.22
SS18-203ENST00000415083 CRIP2P52943 208 aaPredicted RBP7.44□□□□□ -1.22
SS18-203ENST00000415083 LAGE3Q14657 143 aa7.44□□□□□ -1.22
SS18-203ENST00000415083 SH2D6Q7Z4S9 175 aa7.44□□□□□ -1.22
SS18-203ENST00000415083 TM2D2Q9BX73 214 aa7.44□□□□□ -1.22
SS18-203ENST00000415083 LINC00315P59091 139 aa7.44□□□□□ -1.22
SS18-203ENST00000415083 A0A087WX48 190 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 H3BMG7 143 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 GNRH2O43555 120 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 DPM2O94777 84 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 RNASE3P12724 160 aaKnown RBP7.43□□□□□ -1.22
SS18-203ENST00000415083 TMEM78Q5T7P6 136 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 SFTA2Q6UW10 78 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 IGHV4-39P01824 125 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 CEND1Q8N111 149 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 METTL26Q96S19 204 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 TRBV7-3A0A075B6L6 115 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 TRAV41A0A0B4J266 112 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 TSHBP01222 138 aa7.43□□□□□ -1.22
SS18-203ENST00000415083 CRYGDP07320 174 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 IGHV4-38-2P0DP08 117 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 ATP5G2Q06055 141 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 LY6DQ14210 128 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 OR5A1Q8NGJ0 315 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 SMIM2Q9BVW6 85 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.42□□□□□ -1.22
SS18-203ENST00000415083 RAB9AP51151 201 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 APRG1Q8IVJ8 170 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 HLA-DRB4P13762 266 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 AZU1P20160 251 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 ETDBQ3ZM63 59 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 SAMD13Q5VXD3 122 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 C16orf92Q96LL3 132 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 JPT2Q9H910 190 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 TSSC4Q9Y5U2 329 aaPredicted RBP7.42□□□□□ -1.22
SS18-203ENST00000415083 HLA-DRB4X5D2U9 266 aa7.42□□□□□ -1.22
SS18-203ENST00000415083 ATP5LO75964 103 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 C14orf178Q8N769 122 aaPredicted RBP7.41□□□□□ -1.22
SS18-203ENST00000415083 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 HIF1ANQ9NWT6 349 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 IGHV4-61A0A0C4DH41 118 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 E9PLD3 99 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 IGHV3-11P01762 117 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 BLCAPP62952 87 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 SPANXN1Q5VSR9 72 aa7.41□□□□□ -1.22
SS18-203ENST00000415083 M0R381 172 aa7.4□□□□□ -1.22
SS18-203ENST00000415083 ARL3P36405 182 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms