RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MGST1P10620 155 aaKnown RBP2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 FGF6P10767 208 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 ORM2P19652 201 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 MPV17P39210 176 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 EMP1P54849 157 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 UBE2L3P68036 154 aaKnown RBP2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 TNFAIP6P98066 277 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 TTC32Q5I0X7 151 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 KLF17Q5JT82 389 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 C10orf113Q5VZT2 155 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 LCN12Q6JVE5 192 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 MIR17HGQ75NE6 70 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 WDR86Q86TI4 376 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 PDPNQ86YL7 162 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 C6orf223Q8N319 242 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 CD177Q8N6Q3 437 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 C11orf72Q8NBR9 251 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 OR11H6Q8NGC7 330 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 CHCHD10Q8WYQ3 142 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 RNF185Q96GF1 192 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 PAXXQ9BUH6 204 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 SLC25A2Q9BXI2 301 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 IFI27L2Q9H2X8 130 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF355PQ9NSJ1 428 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 TMEM14CQ9P0S9 112 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 CLCF1Q9UBD9 225 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 U3KQK5 164 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 FER1L5A0AVI2 2057 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 DOCK11Q5JSL3 2073 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 GTF3C1Q12789 2109 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 PDE4DIPQ5VU43 2346 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 CEP192Q8TEP8 1941 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 PCDH15Q96QU1 1955 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 A0A1B0GUT8 65 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 TCRBV4S1A1TA0A5B7 111 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 H0Y9J4 135 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 COX7A2P2O60397 106 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 FSTL3O95633 263 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 SMIM13P0DJ93 91 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 RNASE2P10153 161 aaKnown RBP2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 FXYD3Q14802 87 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 GDF5OSQ5U4N7 250 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 C2orf91Q6ZV80 131 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 ATOH7Q8N100 152 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 ATP6V0E2Q8NHE4 81 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 GTSF1Q8WW33 167 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 FXYD5Q96DB9 178 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 PGLYRP4Q96LB8 373 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 METTL26Q96S19 204 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 TRGV9Q99603 122 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPANXDQ9BXN6 97 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 OTORQ9NRC9 128 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 NDUFA4L2Q9NRX3 87 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPRR3Q9UBC9 169 aa2.62□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGKV1OR2-108A0A075B7D4 117 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 TRAV8-2A0A0B4J237 113 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 TRAV26-2A0A0B4J265 109 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 PLAC8L1A1L4L8 177 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC01549A6NIU2 74 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 E9PLD3 99 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 K7EM74 188 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 K7EMI3 77 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 LY6G6DO95868 133 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 APOA2P02652 100 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 TCRAP04437 139 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 LGALS1P09382 135 aaKnown RBP2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 DEFA4P12838 97 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 EVI2AP22794 236 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 CNTFRP26992 372 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 PRR3P79522 188 aaKnown RBP2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 PDE6HQ13956 83 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 PLGLAQ15195 96 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 LYRM7Q5U5X0 104 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 MDP1Q86V88 176 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC00311Q8N616 119 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 TMEM75Q8N9X5 138 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 TMEM167AQ8TBQ9 72 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 KLF14Q8TD94 323 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 CCL17Q92583 94 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 PLEKHB2Q96CS7 222 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 C9orf85Q96MD7 179 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 RBM12B-AS1Q9P1G2 102 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 DHRS4-AS1Q9P1J3 65 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 KLF13Q9Y2Y9 288 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPCS1Q9Y6A9 102 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 U3KQA8 63 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 EML6Q6ZMW3 1958 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 MYO7AQ13402 2215 aa2.61□□□□□ -1.99
HMGB3P23-201ENST00000414981 USF3Q68DE3 2245 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 RTTNQ86VV8 2226 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPAARA0A1B0GVQ0 90 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 PGPA6NDG6 321 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 FABP5P3A8MUU1 101 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 C9JAW5 83 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 TMEM262E9PQX1 116 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 H3BUT2 72 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPINK4O60575 86 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 LHBP01229 141 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGHV3-7P01780 117 aa2.6□□□□□ -1.99
HMGB3P23-201ENST00000414981 HBDP02042 147 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms