RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 EMP1P54849 157 aa12.69□□□□□ -0.38
HDAC11-204ENST00000404040 C11orf52Q96A22 123 aa12.69□□□□□ -0.38
HDAC11-204ENST00000404040 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
HDAC11-204ENST00000404040 TEX48A0A1B0GUV7 120 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 SCO2A0A1W2PP80 73 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 NDUFS6O75380 124 aaKnown RBP12.68□□□□□ -0.38
HDAC11-204ENST00000404040 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 RNF212Q495C1 297 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 C1orf134Q5TEV5 83 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 Q6AWC8 147 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 Q86TA4 180 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 DKK2Q9UBU2 259 aa12.68□□□□□ -0.38
HDAC11-204ENST00000404040 LRP1BQ9NZR2 4599 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 TRAV34A0A0B4J273 112 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 TRAV21A0A0B4J279 112 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 ZNF506Q5JVG8 444 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 ZNF493Q6ZR52 646 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 LINC00479Q96M42 142 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 FAM210AQ96ND0 272 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 LINC00467Q9BRT7 94 aa12.67□□□□□ -0.38
HDAC11-204ENST00000404040 EIF5A2Q9GZV4 153 aaKnown RBP12.67□□□□□ -0.38
HDAC11-204ENST00000404040 RGS13O14921 159 aa12.66□□□□□ -0.38
HDAC11-204ENST00000404040 ZNF324O75467 553 aaPredicted RBP12.66□□□□□ -0.38
HDAC11-204ENST00000404040 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
HDAC11-204ENST00000404040 FAM222AQ5U5X8 452 aa12.66□□□□□ -0.38
HDAC11-204ENST00000404040 TMEM250H0YL14 139 aa12.65□□□□□ -0.38
HDAC11-204ENST00000404040 LTAP01374 205 aa12.65□□□□□ -0.38
HDAC11-204ENST00000404040 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
HDAC11-204ENST00000404040 C16orf74Q96GX8 76 aa12.65□□□□□ -0.38
HDAC11-204ENST00000404040 MED9Q9NWA0 146 aa12.65□□□□□ -0.38
HDAC11-204ENST00000404040 C16orf90A8MZG2 172 aa12.64□□□□□ -0.39
HDAC11-204ENST00000404040 GCGP01275 180 aa12.64□□□□□ -0.39
HDAC11-204ENST00000404040 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
HDAC11-204ENST00000404040 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
HDAC11-204ENST00000404040 TOR2AQ5JU69 321 aa12.64□□□□□ -0.39
HDAC11-204ENST00000404040 PRR9Q5T870 116 aa12.64□□□□□ -0.39
HDAC11-204ENST00000404040 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
HDAC11-204ENST00000404040 TMEM183AQ8IXX5 376 aa12.64□□□□□ -0.39
HDAC11-204ENST00000404040 EIF4E3Q8N5X7 224 aaKnown RBP12.64□□□□□ -0.39
HDAC11-204ENST00000404040 TMEM263Q8WUH6 116 aaKnown RBP12.64□□□□□ -0.39
HDAC11-204ENST00000404040 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
HDAC11-204ENST00000404040 IGHV1OR15-1A0A075B7D0 117 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 ZNF705GA8MUZ8 300 aaPredicted RBP12.63□□□□□ -0.39
HDAC11-204ENST00000404040 HTN1P15515 57 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 HTN3P15516 51 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 ANXA2RQ3ZCQ2 193 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 FAM159AQ6UWV7 190 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 BAGE2Q86Y30 109 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 KCNS1Q96KK3 526 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 C8orf49Q96NF6 230 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 SMDT1Q9H4I9 107 aa12.63□□□□□ -0.39
HDAC11-204ENST00000404040 CBY3A6NI87 242 aa12.62□□□□□ -0.39
HDAC11-204ENST00000404040 FABP5P3A8MUU1 101 aa12.62□□□□□ -0.39
HDAC11-204ENST00000404040 TNP2Q05952 138 aa12.62□□□□□ -0.39
HDAC11-204ENST00000404040 PEA15Q15121 130 aa12.62□□□□□ -0.39
HDAC11-204ENST00000404040 TMEM88Q6PEY1 159 aa12.62□□□□□ -0.39
HDAC11-204ENST00000404040 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
HDAC11-204ENST00000404040 GNG4P50150 75 aa12.61□□□□□ -0.39
HDAC11-204ENST00000404040 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
HDAC11-204ENST00000404040 TDRG1Q3Y452 100 aa12.61□□□□□ -0.39
HDAC11-204ENST00000404040 CLLU1Q5K131 121 aa12.61□□□□□ -0.39
HDAC11-204ENST00000404040 PCNPQ8WW12 178 aaKnown RBP12.61□□□□□ -0.39
HDAC11-204ENST00000404040 BIN3Q9NQY0 253 aa12.61□□□□□ -0.39
HDAC11-204ENST00000404040 APOBP04114 4563 aaKnown RBP12.6□□□□□ -0.39
HDAC11-204ENST00000404040 TRGV11A0A075B6L2 103 aa12.6□□□□□ -0.39
HDAC11-204ENST00000404040 SNURFLB1AK76 121 aa12.6□□□□□ -0.39
HDAC11-204ENST00000404040 IFITM2Q01629 132 aa12.6□□□□□ -0.39
HDAC11-204ENST00000404040 IBA57Q5T440 356 aaKnown RBP12.6□□□□□ -0.39
HDAC11-204ENST00000404040 FAM162BQ5T6X4 162 aa12.6□□□□□ -0.39
HDAC11-204ENST00000404040 RNASE8Q8TDE3 154 aaKnown RBP12.6□□□□□ -0.39
HDAC11-204ENST00000404040 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
HDAC11-204ENST00000404040 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
HDAC11-204ENST00000404040 CENPWQ5EE01 88 aa12.59□□□□□ -0.39
HDAC11-204ENST00000404040 DERL1Q9BUN8 251 aa12.59□□□□□ -0.39
HDAC11-204ENST00000404040 MLST8Q9BVC4 326 aa12.59□□□□□ -0.39
HDAC11-204ENST00000404040 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
HDAC11-204ENST00000404040 LYRM9A8MSI8 78 aa12.58□□□□□ -0.4
HDAC11-204ENST00000404040 C9JCJ5 164 aa12.58□□□□□ -0.4
HDAC11-204ENST00000404040 AZU1P20160 251 aa12.58□□□□□ -0.4
HDAC11-204ENST00000404040 ZNF80P51504 273 aaPredicted RBP12.58□□□□□ -0.4
HDAC11-204ENST00000404040 MUC21Q5SSG8 566 aa12.58□□□□□ -0.4
HDAC11-204ENST00000404040 C15orf53Q8NAA6 179 aa12.58□□□□□ -0.4
HDAC11-204ENST00000404040 ZC2HC1AQ96GY0 325 aa12.58□□□□□ -0.4
HDAC11-204ENST00000404040 DAD1P61803 113 aa12.57□□□□□ -0.4
HDAC11-204ENST00000404040 ZNF415Q09FC8 603 aa12.57□□□□□ -0.4
HDAC11-204ENST00000404040 ZNF674Q2M3X9 581 aa12.57□□□□□ -0.4
HDAC11-204ENST00000404040 PARLQ9H300 379 aa12.57□□□□□ -0.4
HDAC11-204ENST00000404040 HERC1Q15751 4861 aa12.56□□□□□ -0.4
HDAC11-204ENST00000404040 DAZ2Q13117 558 aaKnown RBP12.56□□□□□ -0.4
HDAC11-204ENST00000404040 NHLRC2Q8NBF2 726 aa12.56□□□□□ -0.4
HDAC11-204ENST00000404040 DNAH5Q8TE73 4624 aa12.56□□□□□ -0.4
HDAC11-204ENST00000404040 NBDYA0A0U1RRE5 68 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 RAB19A4D1S5 217 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 PRM2P04554 102 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
HDAC11-204ENST00000404040 CEBPGP53567 150 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 TCL1AP56279 114 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 FAM74A3Q4VXF1 159 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms