RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ORM1P02763 201 aa23.98■■□□□ 1.43
CSNK1E-204ENST00000403904 NAT8Q9UHE5 227 aa23.98■■□□□ 1.43
CSNK1E-204ENST00000403904 TDRG1Q3Y452 100 aa23.97■■□□□ 1.43
CSNK1E-204ENST00000403904 BIN3Q9NQY0 253 aa23.97■■□□□ 1.43
CSNK1E-204ENST00000403904 IGKV3D-20A0A0C4DH25 116 aa23.96■■□□□ 1.43
CSNK1E-204ENST00000403904 GNRH2O43555 120 aa23.95■■□□□ 1.43
CSNK1E-204ENST00000403904 DAZAP1Q96EP5 407 aaKnown RBP23.95■■□□□ 1.43
CSNK1E-204ENST00000403904 KCNS1Q96KK3 526 aa23.95■■□□□ 1.43
CSNK1E-204ENST00000403904 C19orf71A6NCJ1 209 aa23.95■■□□□ 1.42
CSNK1E-204ENST00000403904 TGP01266 2768 aa23.95■■□□□ 1.42
CSNK1E-204ENST00000403904 RNASE8Q8TDE3 154 aaKnown RBP23.95■■□□□ 1.42
CSNK1E-204ENST00000403904 TMEM263Q8WUH6 116 aaKnown RBP23.95■■□□□ 1.42
CSNK1E-204ENST00000403904 SDF2L1Q9HCN8 221 aa23.95■■□□□ 1.42
CSNK1E-204ENST00000403904 EMP1P54849 157 aa23.94■■□□□ 1.42
CSNK1E-204ENST00000403904 RPL23P62829 140 aaKnown RBP23.94■■□□□ 1.42
CSNK1E-204ENST00000403904 B4DEV8 164 aa23.93■■□□□ 1.42
CSNK1E-204ENST00000403904 TYMSP04818 313 aa23.93■■□□□ 1.42
CSNK1E-204ENST00000403904 ADCYAP1P18509 176 aa23.93■■□□□ 1.42
CSNK1E-204ENST00000403904 C16orf74Q96GX8 76 aa23.93■■□□□ 1.42
CSNK1E-204ENST00000403904 RNASE7Q9H1E1 156 aaKnown RBP23.93■■□□□ 1.42
CSNK1E-204ENST00000403904 TMSB15BA0A087X1C1 80 aa23.92■■□□□ 1.42
CSNK1E-204ENST00000403904 KRBOX1C9JBD0 128 aa23.92■■□□□ 1.42
CSNK1E-204ENST00000403904 RPL19P84098 196 aaKnown RBP23.92■■□□□ 1.42
CSNK1E-204ENST00000403904 ADIRFQ15847 76 aa23.92■■□□□ 1.42
CSNK1E-204ENST00000403904 LINC01559Q495D7 138 aa23.92■■□□□ 1.42
CSNK1E-204ENST00000403904 SLC7A5P1Q8MH63 180 aa23.92■■□□□ 1.42
CSNK1E-204ENST00000403904 F8W036 122 aa23.91■■□□□ 1.42
CSNK1E-204ENST00000403904 ZNF493Q6ZR52 646 aa23.91■■□□□ 1.42
CSNK1E-204ENST00000403904 NUDT10Q8NFP7 164 aa23.91■■□□□ 1.42
CSNK1E-204ENST00000403904 NUDT11Q96G61 164 aa23.91■■□□□ 1.42
CSNK1E-204ENST00000403904 MDFICQ9P1T7 246 aa23.91■■□□□ 1.42
CSNK1E-204ENST00000403904 U3KQK5 164 aa23.91■■□□□ 1.42
CSNK1E-204ENST00000403904 A0A0J9YWU9 116 aa23.91■■□□□ 1.42
CSNK1E-204ENST00000403904 TRGV11A0A075B6L2 103 aa23.9■■□□□ 1.42
CSNK1E-204ENST00000403904 PLAC8L1A1L4L8 177 aa23.9■■□□□ 1.42
CSNK1E-204ENST00000403904 P01737 135 aa23.9■■□□□ 1.42
CSNK1E-204ENST00000403904 C11orf72Q8NBR9 251 aa23.9■■□□□ 1.42
CSNK1E-204ENST00000403904 GSN-AS1Q9NRJ2 163 aa23.9■■□□□ 1.42
CSNK1E-204ENST00000403904 ZNF575Q86XF7 245 aa23.89■■□□□ 1.41
CSNK1E-204ENST00000403904 STAB2Q8WWQ8 2551 aa23.88■■□□□ 1.41
CSNK1E-204ENST00000403904 TMEM189A5PLL7 270 aa23.88■■□□□ 1.41
CSNK1E-204ENST00000403904 IBA57Q5T440 356 aaKnown RBP23.88■■□□□ 1.41
CSNK1E-204ENST00000403904 ISOC2Q96AB3 205 aa23.88■■□□□ 1.41
CSNK1E-204ENST00000403904 IGHV3-16A0A0C4DH30 117 aa23.87■■□□□ 1.41
CSNK1E-204ENST00000403904 GRIFINA4D1Z8 144 aa23.87■■□□□ 1.41
CSNK1E-204ENST00000403904 ERVFC1-1P60608 527 aa23.87■■□□□ 1.41
CSNK1E-204ENST00000403904 C11orf68Q9H3H3 251 aaKnown RBP23.87■■□□□ 1.41
CSNK1E-204ENST00000403904 SEC11CQ9BY50 192 aa23.86■■□□□ 1.41
CSNK1E-204ENST00000403904 OR2D3Q8NGH3 330 aa23.86■■□□□ 1.41
CSNK1E-204ENST00000403904 SNURFLB1AK76 121 aa23.85■■□□□ 1.41
CSNK1E-204ENST00000403904 ZNF415Q09FC8 603 aa23.85■■□□□ 1.41
CSNK1E-204ENST00000403904 FAM231DQ6ZW35 169 aa23.85■■□□□ 1.41
CSNK1E-204ENST00000403904 TCL1AP56279 114 aa23.83■■□□□ 1.41
CSNK1E-204ENST00000403904 NOP10Q9NPE3 64 aaKnown RBP23.83■■□□□ 1.41
CSNK1E-204ENST00000403904 TIMM8BQ9Y5J9 83 aaPredicted RBP23.83■■□□□ 1.41
CSNK1E-204ENST00000403904 S100A4P26447 101 aaKnown RBP23.82■■□□□ 1.4
CSNK1E-204ENST00000403904 ASIPP42127 132 aa23.82■■□□□ 1.4
CSNK1E-204ENST00000403904 NDUFA5Q16718 116 aa23.82■■□□□ 1.4
CSNK1E-204ENST00000403904 RPP21Q9H633 154 aaKnown RBP23.82■■□□□ 1.4
CSNK1E-204ENST00000403904 SFRP2Q96HF1 295 aa23.82■■□□□ 1.4
CSNK1E-204ENST00000403904 GATCO43716 136 aaKnown RBP23.81■■□□□ 1.4
CSNK1E-204ENST00000403904 GZMBP10144 247 aa23.81■■□□□ 1.4
CSNK1E-204ENST00000403904 RNASE3P12724 160 aaKnown RBP23.81■■□□□ 1.4
CSNK1E-204ENST00000403904 PNRC1Q12796 327 aaPredicted RBP23.81■■□□□ 1.4
CSNK1E-204ENST00000403904 IL17DQ8TAD2 202 aa23.81■■□□□ 1.4
CSNK1E-204ENST00000403904 OSTCQ9NRP0 149 aa23.81■■□□□ 1.4
CSNK1E-204ENST00000403904 CELA1Q9UNI1 258 aa23.81■■□□□ 1.4
CSNK1E-204ENST00000403904 FAM222AQ5U5X8 452 aa23.8■■□□□ 1.4
CSNK1E-204ENST00000403904 C10orf91Q5T1B1 145 aa23.79■■□□□ 1.4
CSNK1E-204ENST00000403904 DKK2Q9UBU2 259 aa23.79■■□□□ 1.4
CSNK1E-204ENST00000403904 H3BVH4 76 aa23.78■■□□□ 1.4
CSNK1E-204ENST00000403904 DAZ2Q13117 558 aaKnown RBP23.78■■□□□ 1.4
CSNK1E-204ENST00000403904 DNLZQ5SXM8 178 aa23.78■■□□□ 1.4
CSNK1E-204ENST00000403904 C15orf54Q8N8G6 183 aa23.78■■□□□ 1.4
CSNK1E-204ENST00000403904 RPS20P60866 119 aaKnown RBP23.78■■□□□ 1.4
CSNK1E-204ENST00000403904 EDA2RQ9HAV5 297 aa23.78■■□□□ 1.4
CSNK1E-204ENST00000403904 ARMS2P0C7Q2 107 aa23.77■■□□□ 1.4
CSNK1E-204ENST00000403904 OR10G8Q8NGN5 311 aa23.77■■□□□ 1.4
CSNK1E-204ENST00000403904 C9orf85Q96MD7 179 aa23.77■■□□□ 1.4
CSNK1E-204ENST00000403904 IL36BQ9NZH7 164 aa23.77■■□□□ 1.4
CSNK1E-204ENST00000403904 MUC4Q99102 2169 aa23.76■■□□□ 1.39
CSNK1E-204ENST00000403904 CXCL1P09341 107 aa23.76■■□□□ 1.39
CSNK1E-204ENST00000403904 SPART-AS1P0CW21 52 aa23.76■■□□□ 1.39
CSNK1E-204ENST00000403904 CARHSP1Q9Y2V2 147 aaKnown RBP23.76■■□□□ 1.39
CSNK1E-204ENST00000403904 XKRY2A2RUG3 117 aa23.75■■□□□ 1.39
CSNK1E-204ENST00000403904 SPXQ9BT56 116 aa23.75■■□□□ 1.39
CSNK1E-204ENST00000403904 LYRM9A8MSI8 78 aa23.74■■□□□ 1.39
CSNK1E-204ENST00000403904 V9GYV3 84 aa23.74■■□□□ 1.39
CSNK1E-204ENST00000403904 CXorf65A6NEN9 183 aa23.74■■□□□ 1.39
CSNK1E-204ENST00000403904 Q6ZTI0 123 aa23.74■■□□□ 1.39
CSNK1E-204ENST00000403904 TRGV1A0A0A0MS02 117 aa23.73■■□□□ 1.39
CSNK1E-204ENST00000403904 SPINK4O60575 86 aa23.73■■□□□ 1.39
CSNK1E-204ENST00000403904 MRPL16Q9NX20 251 aaKnown RBP23.73■■□□□ 1.39
CSNK1E-204ENST00000403904 C11orf45Q8TAV5 145 aa23.72■■□□□ 1.39
CSNK1E-204ENST00000403904 DEFB130BP0DP73 79 aa23.71■■□□□ 1.39
CSNK1E-204ENST00000403904 DEFB130AP0DP74 79 aa23.71■■□□□ 1.39
CSNK1E-204ENST00000403904 CT83Q5H943 113 aa23.71■■□□□ 1.39
CSNK1E-204ENST00000403904 TPPP3Q9BW30 176 aa23.71■■□□□ 1.39
CSNK1E-204ENST00000403904 SCRT2Q9NQ03 307 aa23.71■■□□□ 1.39
CSNK1E-204ENST00000403904 A8MWL6 223 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms