RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.45
PTCHD3P3-201ENST00000403073 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TRAV10A0A0B4J240 114 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 NUPR2A6NF83 97 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 SH2D1AO60880 128 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TYMSP04818 313 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TCL1AP56279 114 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 DAZ2Q13117 558 aaKnown RBP12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 MLST8Q9BVC4 326 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 EIF5A2Q9GZV4 153 aaKnown RBP12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 SDF2L1Q9HCN8 221 aa12.2□□□□□ -0.46
PTCHD3P3-201ENST00000403073 DEFB131BA0A096LNP1 70 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 GAGE12BA1L429 117 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 GAGE7O76087 117 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 GAGE12FP0CL80 117 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 GAGE12GP0CL81 117 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 GAGE12IP0CL82 117 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 HTN3P15516 51 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 ZNF415Q09FC8 603 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 CENPWQ5EE01 88 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 FAM162BQ5T6X4 162 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 Q6ZTI0 123 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 FAM210AQ96ND0 272 aa12.19□□□□□ -0.46
PTCHD3P3-201ENST00000403073 ORM1P02763 201 aa12.18□□□□□ -0.46
PTCHD3P3-201ENST00000403073 ZNF674Q2M3X9 581 aa12.18□□□□□ -0.46
PTCHD3P3-201ENST00000403073 LINC00612Q8N6U2 182 aa12.18□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TRGV1A0A0A0MS02 117 aa12.17□□□□□ -0.46
PTCHD3P3-201ENST00000403073 SPINK4O60575 86 aa12.17□□□□□ -0.46
PTCHD3P3-201ENST00000403073 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
PTCHD3P3-201ENST00000403073 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
PTCHD3P3-201ENST00000403073 KLK5Q9Y337 293 aaPredicted RBP12.17□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TRBV20OR9-2A0A075B6H5 130 aa12.16□□□□□ -0.46
PTCHD3P3-201ENST00000403073 PGPEP1LA6NFU8 196 aa12.16□□□□□ -0.46
PTCHD3P3-201ENST00000403073 M0R036 132 aa12.16□□□□□ -0.46
PTCHD3P3-201ENST00000403073 GNG4P50150 75 aa12.16□□□□□ -0.46
PTCHD3P3-201ENST00000403073 CEBPGP53567 150 aa12.16□□□□□ -0.46
PTCHD3P3-201ENST00000403073 IFITM2Q01629 132 aa12.16□□□□□ -0.46
PTCHD3P3-201ENST00000403073 PRR27Q6MZM9 219 aa12.16□□□□□ -0.46
PTCHD3P3-201ENST00000403073 B4DEV8 164 aa12.15□□□□□ -0.46
PTCHD3P3-201ENST00000403073 IGLL5B9A064 214 aa12.15□□□□□ -0.46
PTCHD3P3-201ENST00000403073 KRBOX1C9JBD0 128 aa12.15□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TMEM250H0YL14 139 aa12.15□□□□□ -0.46
PTCHD3P3-201ENST00000403073 MGST1P10620 155 aaKnown RBP12.15□□□□□ -0.46
PTCHD3P3-201ENST00000403073 SPXQ9BT56 116 aa12.15□□□□□ -0.46
PTCHD3P3-201ENST00000403073 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 TMSB15BA0A087X1C1 80 aa12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 GRIFINA4D1Z8 144 aa12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 ATP5G1P05496 136 aa12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 SRP19P09132 144 aaKnown RBP12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 LGALS9BQ3B8N2 356 aa12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 ZNF575Q86XF7 245 aa12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 PARLQ9H300 379 aa12.14□□□□□ -0.47
PTCHD3P3-201ENST00000403073 STARD9Q9P2P6 4700 aa12.13□□□□□ -0.47
PTCHD3P3-201ENST00000403073 CSMD3Q7Z407 3707 aa12.13□□□□□ -0.47
PTCHD3P3-201ENST00000403073 RAB14P61106 215 aa12.13□□□□□ -0.47
PTCHD3P3-201ENST00000403073 SRSF3P84103 164 aaKnown RBP12.13□□□□□ -0.47
PTCHD3P3-201ENST00000403073 LINC01559Q495D7 138 aa12.13□□□□□ -0.47
PTCHD3P3-201ENST00000403073 C9JQL5 133 aa12.12□□□□□ -0.47
PTCHD3P3-201ENST00000403073 F5H768 121 aa12.12□□□□□ -0.47
PTCHD3P3-201ENST00000403073 M0R2P5 195 aa12.12□□□□□ -0.47
PTCHD3P3-201ENST00000403073 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
PTCHD3P3-201ENST00000403073 ASIPP42127 132 aa12.12□□□□□ -0.47
PTCHD3P3-201ENST00000403073 OCC1Q8TAD7 63 aa12.12□□□□□ -0.47
PTCHD3P3-201ENST00000403073 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
PTCHD3P3-201ENST00000403073 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
PTCHD3P3-201ENST00000403073 S100A4P26447 101 aaKnown RBP12.11□□□□□ -0.47
PTCHD3P3-201ENST00000403073 RPL19P84098 196 aaKnown RBP12.11□□□□□ -0.47
PTCHD3P3-201ENST00000403073 OR5I1Q13606 314 aa12.11□□□□□ -0.47
PTCHD3P3-201ENST00000403073 RASL10AQ92737 203 aa12.11□□□□□ -0.47
PTCHD3P3-201ENST00000403073 SMIM12Q96EX1 92 aa12.11□□□□□ -0.47
PTCHD3P3-201ENST00000403073 DYNC2H1Q8NCM8 4307 aaKnown RBP12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 C9JCJ5 164 aa12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 NDUFS6O75380 124 aaKnown RBP12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 IGHV3-53P01767 116 aa12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 HOXA5P20719 270 aa12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 PEA15Q15121 130 aa12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 C18orf15Q96N68 181 aa12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 APLNQ9ULZ1 77 aa12.1□□□□□ -0.47
PTCHD3P3-201ENST00000403073 H3BVH4 76 aa12.09□□□□□ -0.47
PTCHD3P3-201ENST00000403073 ARMS2P0C7Q2 107 aa12.09□□□□□ -0.47
PTCHD3P3-201ENST00000403073 DNLZQ5SXM8 178 aa12.09□□□□□ -0.47
PTCHD3P3-201ENST00000403073 TMEM88Q6PEY1 159 aa12.09□□□□□ -0.47
PTCHD3P3-201ENST00000403073 DAZAP1Q96EP5 407 aaKnown RBP12.09□□□□□ -0.47
PTCHD3P3-201ENST00000403073 C19orf71A6NCJ1 209 aa12.08□□□□□ -0.48
PTCHD3P3-201ENST00000403073 K7EN84 100 aa12.08□□□□□ -0.48
PTCHD3P3-201ENST00000403073 ZNF876PQ49A33 203 aa12.08□□□□□ -0.48
PTCHD3P3-201ENST00000403073 CLLU1Q5K131 121 aa12.08□□□□□ -0.48
PTCHD3P3-201ENST00000403073 SMIM7Q9BQ49 75 aa12.08□□□□□ -0.48
PTCHD3P3-201ENST00000403073 IL36BQ9NZH7 164 aa12.08□□□□□ -0.48
PTCHD3P3-201ENST00000403073 ZNF727A8MUV8 499 aa12.07□□□□□ -0.48
PTCHD3P3-201ENST00000403073 POM121L12Q8N7R1 296 aa12.07□□□□□ -0.48
PTCHD3P3-201ENST00000403073 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
PTCHD3P3-201ENST00000403073 BIN3Q9NQY0 253 aa12.07□□□□□ -0.48
PTCHD3P3-201ENST00000403073 SFTA3P0C7M3 94 aa12.06□□□□□ -0.48
PTCHD3P3-201ENST00000403073 TCTAP57738 103 aa12.06□□□□□ -0.48
PTCHD3P3-201ENST00000403073 NUDT10Q8NFP7 164 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms