RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 ZNF48Q96MX3 618 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-203ENST00000400556 COL25A1Q9BXS0 654 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-203ENST00000400556 DPM2O94777 84 aa8.09□□□□□ -1.12
PPP4R1-203ENST00000400556 FABP2P12104 132 aa8.09□□□□□ -1.12
PPP4R1-203ENST00000400556 C11orf71Q6IPW1 123 aa8.09□□□□□ -1.12
PPP4R1-203ENST00000400556 C14orf178Q8N769 122 aaPredicted RBP8.09□□□□□ -1.12
PPP4R1-203ENST00000400556 PSMG3-AS1Q96PY0 264 aa8.09□□□□□ -1.12
PPP4R1-203ENST00000400556 CACNA1AO00555 2505 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 FAM110DQ8TAY7 271 aaPredicted RBP8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 MYOZ3Q8TDC0 251 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 METTL26Q96S19 204 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 SIRPDQ9H106 197 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 S100A4P26447 101 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 Q8N8P6 123 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 NRACQ8N912 160 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 DPF1Q92782 380 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 CSTL1Q9H114 145 aa8.08□□□□□ -1.12
PPP4R1-203ENST00000400556 AJUBAQ96IF1 538 aa8.07□□□□□ -1.12
PPP4R1-203ENST00000400556 IGLV2-18A0A075B6J9 118 aa8.07□□□□□ -1.12
PPP4R1-203ENST00000400556 TEX48A0A1B0GUV7 120 aa8.07□□□□□ -1.12
PPP4R1-203ENST00000400556 LAGE3Q14657 143 aa8.07□□□□□ -1.12
PPP4R1-203ENST00000400556 COX8CQ7Z4L0 72 aa8.07□□□□□ -1.12
PPP4R1-203ENST00000400556 EDN2P20800 178 aa8.07□□□□□ -1.12
PPP4R1-203ENST00000400556 LY6DQ14210 128 aa8.07□□□□□ -1.12
PPP4R1-203ENST00000400556 TLN2Q9Y4G6 2542 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 CNFNQ9BYD5 112 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 NPFFR1Q9GZQ6 430 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 MYO18BQ8IUG5 2567 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 USP9XQ93008 2570 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 GNRH2O43555 120 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 EEF1AKMT3Q96AZ1 226 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 HIST1H4GQ99525 98 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 FAM208BQ5VWN6 2430 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 EBI3Q14213 229 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 SLC50A1Q9BRV3 221 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 CYSLTR1Q9Y271 337 aa8.06□□□□□ -1.12
PPP4R1-203ENST00000400556 SETD2Q9BYW2 2564 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 H3BMG7 143 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 RNASE4P34096 147 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 MINOS1Q5TGZ0 78 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 MINOS1-NBL1R4GNA1 71 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 CENPVL3A0A0U1RRI6 287 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 ATP5G2Q06055 141 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 WFDC2Q14508 124 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 SH2D6Q7Z4S9 175 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 MYO9AB2RTY4 2548 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 CFAP46Q8IYW2 2715 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 SIVA1O15304 175 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 ZMAT4Q9H898 229 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 JPT2Q9H910 190 aa8.05□□□□□ -1.12
PPP4R1-203ENST00000400556 MUC4Q99102 2169 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 CEND1Q8N111 149 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 ACACBO00763 2458 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 ZFYVE26Q68DK2 2539 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 G3V4G9 280 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 ARL3P36405 182 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 FBXL19-AS1Q494R0 122 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 NPFFO15130 113 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 IGKV3-20P01619 116 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 UBE2E1P51965 193 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 ANXA2RQ3ZCQ2 193 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 Q6ZS46 218 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 PHLDA3Q9Y5J5 127 aa8.04□□□□□ -1.12
PPP4R1-203ENST00000400556 ATP5LO75964 103 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 TRAV41A0A0B4J266 112 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 SRSF1Q07955 248 aaKnown RBP eCLIP8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 ETDBQ3ZM63 59 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 C5orf56Q8N8D9 126 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 KLHL30-AS1Q8NEE0 82 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 ZNF479Q96JC4 524 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 GTSF1LQ9H1H1 148 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 C2CD3Q4AC94 2353 aa8.03□□□□□ -1.12
PPP4R1-203ENST00000400556 SCGB2A2Q13296 93 aa8.02□□□□□ -1.12
PPP4R1-203ENST00000400556 PHLDA1Q8WV24 401 aaPredicted RBP8.02□□□□□ -1.12
PPP4R1-203ENST00000400556 RASL10AQ92737 203 aa8.02□□□□□ -1.12
PPP4R1-203ENST00000400556 A0A087WX48 190 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 PF4V1P10720 104 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 NBL1P41271 181 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 LMO4P61968 165 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 GPHB5Q86YW7 130 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 PKD1L2Q7Z442 2459 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 NACAE9PAV3 2078 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 A0A087WWL8 130 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 OOSP1A8MZH6 123 aa8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 CD300EQ496F6 205 aaPredicted RBP8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 CHTOPQ9Y3Y2 248 aaKnown RBP8.02□□□□□ -1.13
PPP4R1-203ENST00000400556 IGLL5B9A064 214 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 C19orf84I3L1E1 186 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 TGFAP01135 160 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 SUMO2P61956 95 aaKnown RBP8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 BLCAPP62952 87 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 C12orf74Q32Q52 190 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 RBAKDNA6NC62 111 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 TMEM95Q3KNT9 176 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
PPP4R1-203ENST00000400556 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms