RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PDE6HQ13956 83 aa10.84□□□□□ -0.67
VAPA-202ENST00000400000 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
VAPA-202ENST00000400000 VPREB3Q9UKI3 123 aa10.84□□□□□ -0.67
VAPA-202ENST00000400000 KIF26AQ9ULI4 1882 aaPredicted RBP10.84□□□□□ -0.67
VAPA-202ENST00000400000 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
VAPA-202ENST00000400000 VOPP1Q96AW1 172 aa10.84□□□□□ -0.67
VAPA-202ENST00000400000 NCKAP5O14513 1909 aa10.84□□□□□ -0.67
VAPA-202ENST00000400000 YPEL3P61236 119 aaPredicted RBP10.84□□□□□ -0.67
VAPA-202ENST00000400000 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
VAPA-202ENST00000400000 SHISA9B4DS77 424 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 TRACP01848 142 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 IGHV2-5P01817 119 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 TIRAPP58753 221 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 EML6Q6ZMW3 1958 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 LMO1P25800 156 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 DAND5Q8N907 189 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 ZNF503Q96F45 646 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 CARD19Q96LW7 228 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 CTSZQ9UBR2 303 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 UBL5Q9BZL1 73 aa10.83□□□□□ -0.68
VAPA-202ENST00000400000 C1orf43Q9BWL3 253 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
VAPA-202ENST00000400000 J3QLI3 93 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 DLEU1O43261 78 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 FHL1Q13642 323 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 IGLL5B9A064 214 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 Q9H8V8 135 aa10.82□□□□□ -0.68
VAPA-202ENST00000400000 TRAV4A0A0B4J268 109 aa10.81□□□□□ -0.68
VAPA-202ENST00000400000 NBL1P41271 181 aa10.81□□□□□ -0.68
VAPA-202ENST00000400000 DEFB135Q30KP9 77 aa10.81□□□□□ -0.68
VAPA-202ENST00000400000 C15orf65H3BRN8 121 aa10.81□□□□□ -0.68
VAPA-202ENST00000400000 Q8TCH9 128 aa10.81□□□□□ -0.68
VAPA-202ENST00000400000 CAMK2N2Q96S95 79 aa10.81□□□□□ -0.68
VAPA-202ENST00000400000 UBE2V1Q13404 147 aa10.8□□□□□ -0.68
VAPA-202ENST00000400000 TEX48A0A1B0GUV7 120 aa10.8□□□□□ -0.68
VAPA-202ENST00000400000 H3BMG7 143 aa10.8□□□□□ -0.68
VAPA-202ENST00000400000 ZNF124Q15973 351 aa10.8□□□□□ -0.68
VAPA-202ENST00000400000 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
VAPA-202ENST00000400000 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
VAPA-202ENST00000400000 C9orf66Q5T8R8 295 aa10.8□□□□□ -0.68
VAPA-202ENST00000400000 SEM1Q6ZVN7 128 aa10.8□□□□□ -0.68
VAPA-202ENST00000400000 IGHV4OR15-8A0A075B7B6 117 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 A0A087WW49 117 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 SPATA25Q9BR10 227 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 RHOHQ15669 191 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 IGFL3Q6UXB1 125 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 A0A1B0GW64 132 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 LINC01559Q495D7 138 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 CEND1Q8N111 149 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 FOXL2NBQ6ZUU3 175 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 V9GYV3 84 aa10.79□□□□□ -0.68
VAPA-202ENST00000400000 HERVK_113P63121 156 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 CRYBA4P53673 196 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 CCL18P55774 89 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 LY96Q9Y6Y9 160 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 AJUBAQ96IF1 538 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 J3QQQ9 107 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 IGLC1P0CG04 106 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 Q6ZWC4 215 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 ARHGAP21Q5T5U3 1957 aa10.78□□□□□ -0.68
VAPA-202ENST00000400000 Q6ZVH6 145 aa10.77□□□□□ -0.68
VAPA-202ENST00000400000 UBE2AP49459 152 aa10.77□□□□□ -0.69
VAPA-202ENST00000400000 ETDBQ3ZM63 59 aa10.77□□□□□ -0.69
VAPA-202ENST00000400000 ZNF492Q9P255 531 aa10.77□□□□□ -0.69
VAPA-202ENST00000400000 CENPVL3A0A0U1RRI6 287 aa10.77□□□□□ -0.69
VAPA-202ENST00000400000 K7EN84 100 aa10.77□□□□□ -0.69
VAPA-202ENST00000400000 FOXI2Q6ZQN5 318 aa10.77□□□□□ -0.69
VAPA-202ENST00000400000 CHKB-CPT1BH3BT56 60 aa10.76□□□□□ -0.69
VAPA-202ENST00000400000 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
VAPA-202ENST00000400000 BAALCQ8WXS3 180 aa10.76□□□□□ -0.69
VAPA-202ENST00000400000 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
VAPA-202ENST00000400000 ELANEP08246 267 aa10.76□□□□□ -0.69
VAPA-202ENST00000400000 ICOSQ9Y6W8 199 aa10.76□□□□□ -0.69
VAPA-202ENST00000400000 INAFM2P0DMQ5 153 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 AGPAT4-IT1Q9H0P7 198 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 TRAV13-2A0A0B4J235 113 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 IGLL1P15814 213 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 PIP4P1Q86T03 277 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 FNDC10F2Z333 226 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 IGHV2-70P01814 119 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 SRCAPQ6ZRS2 3230 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 A8MWP6 167 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 ADORA2A-AS1P86434 159 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 IGLC2P0DOY2 106 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
VAPA-202ENST00000400000 C9orf47Q6ZRZ4 202 aa10.74□□□□□ -0.69
VAPA-202ENST00000400000 RSPO1Q2MKA7 263 aaPredicted RBP10.74□□□□□ -0.69
VAPA-202ENST00000400000 RNF138Q8WVD3 245 aa10.74□□□□□ -0.69
VAPA-202ENST00000400000 FANCD2OSQ96PS1 177 aa10.74□□□□□ -0.69
VAPA-202ENST00000400000 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
VAPA-202ENST00000400000 TNRC6BQ9UPQ9 1833 aaKnown RBP10.74□□□□□ -0.69
VAPA-202ENST00000400000 A0A096LNI7 61 aa10.73□□□□□ -0.69
VAPA-202ENST00000400000 IGLV1-44P01699 117 aa10.73□□□□□ -0.69
VAPA-202ENST00000400000 BAALC-AS2P0C853 105 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms