RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF702PQ9H963 129 aa13.38□□□□□ -0.27
HLA-DQB1-204ENST00000399084 A0A096LNJ9 63 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 PPP1R17O96001 155 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 RPLP1P05386 114 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 COL5A1-AS1Q5SY13 56 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 LCNL1Q6ZST4 164 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 Q8N8P6 123 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 PMCHL2Q9BQD1 86 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 MYO18BQ8IUG5 2567 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 COL12A1Q99715 3063 aa13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 PRRC2AP48634 2157 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB1-204ENST00000399084 KLLNB2CW77 178 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 J3QKU1 62 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 K7EMI3 77 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 FCER1GP30273 86 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 SNRPD3P62318 126 aaKnown RBP13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 LINC00469Q8N7U9 141 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 OR2K2Q8NGT1 345 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 SCRT2Q9NQ03 307 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 S100A4P26447 101 aaKnown RBP13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
HLA-DQB1-204ENST00000399084 EVI2AP22794 236 aa13.35□□□□□ -0.27
HLA-DQB1-204ENST00000399084 LEPP41159 167 aa13.35□□□□□ -0.27
HLA-DQB1-204ENST00000399084 PRR9Q5T870 116 aa13.35□□□□□ -0.27
HLA-DQB1-204ENST00000399084 OR1N2Q8NGR9 330 aa13.35□□□□□ -0.27
HLA-DQB1-204ENST00000399084 IFI27L1Q96BM0 104 aa13.35□□□□□ -0.27
HLA-DQB1-204ENST00000399084 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
HLA-DQB1-204ENST00000399084 Q96MF0 132 aa13.34□□□□□ -0.27
HLA-DQB1-204ENST00000399084 UBR5O95071 2799 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB1-204ENST00000399084 SMKR1H3BMG3 65 aa13.33□□□□□ -0.27
HLA-DQB1-204ENST00000399084 HOXA3O43365 443 aaPredicted RBP13.33□□□□□ -0.27
HLA-DQB1-204ENST00000399084 RNASE4P34096 147 aaKnown RBP13.33□□□□□ -0.27
HLA-DQB1-204ENST00000399084 MAJINQ3KP22 176 aa13.33□□□□□ -0.27
HLA-DQB1-204ENST00000399084 SLC25A34Q6PIV7 304 aa13.33□□□□□ -0.27
HLA-DQB1-204ENST00000399084 PHLDA3Q9Y5J5 127 aa13.33□□□□□ -0.27
HLA-DQB1-204ENST00000399084 H3BVH4 76 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 M0R381 172 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 DUSP14O95147 198 aaKnown RBP13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 NCR2O95944 276 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 MAPK1IP1LQ8NDC0 245 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 WFDC12Q8WWY7 111 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 C20orf78Q9BR46 151 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 DPH3P1Q9H4G8 78 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 GOLT1BQ9Y3E0 138 aa13.33□□□□□ -0.28
HLA-DQB1-204ENST00000399084 K7EQG2 157 aa13.32□□□□□ -0.28
HLA-DQB1-204ENST00000399084 NXPH4O95158 308 aa13.32□□□□□ -0.28
HLA-DQB1-204ENST00000399084 ANXA2RQ3ZCQ2 193 aa13.32□□□□□ -0.28
HLA-DQB1-204ENST00000399084 NRACQ8N912 160 aa13.32□□□□□ -0.28
HLA-DQB1-204ENST00000399084 HECTD1Q9ULT8 2610 aa13.32□□□□□ -0.28
HLA-DQB1-204ENST00000399084 IGLV2-18A0A075B6J9 118 aa13.31□□□□□ -0.28
HLA-DQB1-204ENST00000399084 TRAV2A0A0B4J234 112 aa13.31□□□□□ -0.28
HLA-DQB1-204ENST00000399084 ATP5LO75964 103 aa13.31□□□□□ -0.28
HLA-DQB1-204ENST00000399084 ANKRD17O75179 2603 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 FAM159AQ6UWV7 190 aa13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 CSPG4Q6UVK1 2322 aa13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 CR1P17927 2039 aa13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 TCAPO15273 167 aa13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 POM121L12Q8N7R1 296 aa13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 AP1S3Q96PC3 154 aa13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 TIMM8BQ9Y5J9 83 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB1-204ENST00000399084 A0A0J9YX75 114 aa13.29□□□□□ -0.28
HLA-DQB1-204ENST00000399084 hDV102S1A0JD36 115 aa13.29□□□□□ -0.28
HLA-DQB1-204ENST00000399084 LINC01549A6NIU2 74 aa13.29□□□□□ -0.28
HLA-DQB1-204ENST00000399084 HOXD3P31249 432 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB1-204ENST00000399084 LAGE3Q14657 143 aa13.29□□□□□ -0.28
HLA-DQB1-204ENST00000399084 IGKV3-7A0A075B6H7 116 aa13.28□□□□□ -0.28
HLA-DQB1-204ENST00000399084 F6UB75 175 aa13.28□□□□□ -0.28
HLA-DQB1-204ENST00000399084 COX8AP10176 69 aa13.28□□□□□ -0.28
HLA-DQB1-204ENST00000399084 G0S2P27469 103 aa13.28□□□□□ -0.28
HLA-DQB1-204ENST00000399084 SYNJ2BPP57105 145 aa13.28□□□□□ -0.28
HLA-DQB1-204ENST00000399084 KIR3DS1Q14943 382 aa13.28□□□□□ -0.28
HLA-DQB1-204ENST00000399084 KRTAP1-3Q8IUG1 177 aa13.28□□□□□ -0.28
HLA-DQB1-204ENST00000399084 IGHV4OR15-8A0A075B7B6 117 aa13.27□□□□□ -0.28
HLA-DQB1-204ENST00000399084 A0A087WW49 117 aa13.27□□□□□ -0.28
HLA-DQB1-204ENST00000399084 C7orf71A4D174 169 aa13.27□□□□□ -0.28
HLA-DQB1-204ENST00000399084 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.28
HLA-DQB1-204ENST00000399084 PEMTQ9UBM1 199 aa13.27□□□□□ -0.28
HLA-DQB1-204ENST00000399084 H0Y8G0 127 aa13.27□□□□□ -0.29
HLA-DQB1-204ENST00000399084 RNASE3P12724 160 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB1-204ENST00000399084 RPL32P62910 135 aaKnown RBP13.27□□□□□ -0.29
HLA-DQB1-204ENST00000399084 ORMDL2Q53FV1 153 aa13.27□□□□□ -0.29
HLA-DQB1-204ENST00000399084 C12orf54Q6X4T0 127 aa13.27□□□□□ -0.29
HLA-DQB1-204ENST00000399084 FOXI2Q6ZQN5 318 aa13.27□□□□□ -0.29
HLA-DQB1-204ENST00000399084 Q6ZQT7 251 aa13.26□□□□□ -0.29
HLA-DQB1-204ENST00000399084 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
HLA-DQB1-204ENST00000399084 C4orf3Q8WVX3 66 aa13.26□□□□□ -0.29
HLA-DQB1-204ENST00000399084 SMIM2Q9BVW6 85 aa13.26□□□□□ -0.29
HLA-DQB1-204ENST00000399084 J3KRW8 73 aa13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 DLEU1O43261 78 aa13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 SRD5A1P18405 259 aa13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 GAGE1Q13065 139 aa13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 SUMO2P61956 95 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 BATFQ16520 125 aa13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 TMEM158Q8WZ71 300 aa13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 ZMAT4Q9H898 229 aa13.25□□□□□ -0.29
HLA-DQB1-204ENST00000399084 LINC01619G3V211 115 aa13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 SIVA1O15304 175 aa13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 GNRH2O43555 120 aa13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 CD5LO43866 347 aa13.24□□□□□ -0.29
HLA-DQB1-204ENST00000399084 GAS8-AS1O95177 125 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms