RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 MRPL16Q9NX20 251 aaKnown RBP11.93□□□□□ -0.5
LSS-202ENST00000397728 SNAI2O43623 268 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 Q6ZSV7 163 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 DLX4Q92988 240 aaPredicted RBP11.93□□□□□ -0.5
LSS-202ENST00000397728 TRAV13-1A0A0B4J241 112 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
LSS-202ENST00000397728 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 CHD7Q9P2D1 2997 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 CRIP3Q6Q6R5 217 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 SMAD5-AS1Q9Y6J3 95 aa11.93□□□□□ -0.5
LSS-202ENST00000397728 IGHV3-64A0A075B6Q5 118 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 TMEM61Q8N0U2 210 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 HECTD1Q9ULT8 2610 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 TRBV24-1A0A075B6N3 115 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 IGF2BP2-AS1Q96M15 143 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 JOSD1Q15040 202 aaPredicted RBP11.92□□□□□ -0.5
LSS-202ENST00000397728 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 IGHG4P01861 327 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 CXCL1P09341 107 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 UNQ9165/PRO28630Q6UXU0 137 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 CFHR4Q92496 578 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 MRPL36Q9P0J6 103 aaKnown RBP11.92□□□□□ -0.5
LSS-202ENST00000397728 ZNF492Q9P255 531 aa11.92□□□□□ -0.5
LSS-202ENST00000397728 C16orf54Q6UWD8 224 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 Q6ZPA2 131 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 TRPT1Q86TN4 253 aaKnown RBP11.91□□□□□ -0.5
LSS-202ENST00000397728 A0A0J9YY99 117 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 K7EMT4 169 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 CKS1BP61024 79 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 ZC2HC1AQ96GY0 325 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 PYGO2Q9BRQ0 406 aa11.91□□□□□ -0.5
LSS-202ENST00000397728 PAX4O43316 350 aa11.9□□□□□ -0.5
LSS-202ENST00000397728 OR2K2Q8NGT1 345 aa11.9□□□□□ -0.5
LSS-202ENST00000397728 CHTOPQ9Y3Y2 248 aaKnown RBP11.9□□□□□ -0.5
LSS-202ENST00000397728 VWC2Q2TAL6 325 aa11.9□□□□□ -0.51
LSS-202ENST00000397728 SPXQ9BT56 116 aa11.9□□□□□ -0.51
LSS-202ENST00000397728 HTTP42858 3142 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 LINC01549A6NIU2 74 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 C9JQL5 133 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 ASPHD1Q5U4P2 390 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 PATE2Q6UY27 113 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 NDUFA11Q86Y39 141 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 INSL3P51460 131 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 MORN5Q5VZ52 161 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 C1orf229Q6ZS94 237 aaPredicted RBP11.89□□□□□ -0.51
LSS-202ENST00000397728 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
LSS-202ENST00000397728 GNRH2O43555 120 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 DPM2O94777 84 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 U3KQE9 123 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 IGF1P05019 195 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 SHISA2Q6UWI4 295 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 C14orf144Q96I85 54 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BKO60814 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BJP06899 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BOP23527 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BBP33778 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BDP58876 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BCP62807 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST2H2BEQ16778 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BHQ93079 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
LSS-202ENST00000397728 MRPL53Q96EL3 112 aaKnown RBP11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BNQ99877 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 HIST1H2BMQ99879 126 aa11.88□□□□□ -0.51
LSS-202ENST00000397728 MRPS16Q9Y3D3 137 aaKnown RBP11.88□□□□□ -0.51
LSS-202ENST00000397728 TRBV25-1A0A075B6N4 114 aa11.87□□□□□ -0.51
LSS-202ENST00000397728 CTAG1AP78358 180 aa11.87□□□□□ -0.51
LSS-202ENST00000397728 MORN3Q6PF18 240 aaPredicted RBP11.87□□□□□ -0.51
LSS-202ENST00000397728 HIST2H2BDQ6DRA6 164 aa11.87□□□□□ -0.51
LSS-202ENST00000397728 TRAV25A0A0B4J276 109 aa11.87□□□□□ -0.51
LSS-202ENST00000397728 TNFRSF6BO95407 300 aa11.87□□□□□ -0.51
LSS-202ENST00000397728 IGKV1OR2-108A0A075B7D4 117 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 COLCA2A8K830 154 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 PRSS46E5RG02 174 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 DEFB1P60022 68 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 AVPP01185 164 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 M0R2P5 195 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 SPRY2O43597 315 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 SS18Q15532 418 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 C6orf226Q5I0X4 101 aa11.86□□□□□ -0.51
LSS-202ENST00000397728 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
LSS-202ENST00000397728 SPART-AS1P0CW21 52 aa11.85□□□□□ -0.51
LSS-202ENST00000397728 CT83Q5H943 113 aa11.85□□□□□ -0.51
LSS-202ENST00000397728 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
LSS-202ENST00000397728 LINC00158P58513 81 aa11.85□□□□□ -0.51
LSS-202ENST00000397728 BRWD1-AS2P59051 145 aa11.85□□□□□ -0.51
LSS-202ENST00000397728 HILS1P60008 231 aa11.85□□□□□ -0.51
LSS-202ENST00000397728 SEC11AP67812 179 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms