RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CCL21O00585 134 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 CD7P09564 240 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 FGF6P10767 208 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 C1orf229Q6ZS94 237 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-205ENST00000397611 C2CD3Q4AC94 2353 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 EFNA4P52798 201 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 C11orf68Q9H3H3 251 aaKnown RBP4.3□□□□□ -1.72
PTPRD-205ENST00000397611 TRBV25-1A0A075B6N4 114 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 NBR2O15453 112 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 NEGR1Q7Z3B1 354 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 LY6G5BQ8NDX9 201 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 HIGD1BQ9P298 99 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 SPTBN4Q9H254 2564 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 M0R1W7 72 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 TRACP01848 142 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 ZNF625Q96I27 306 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 MOB4Q9Y3A3 225 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 TMEM200BQ69YZ2 307 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 TP53TG1Q9Y2A0 90 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 COL27A1Q8IZC6 1860 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 COL6A6A6NMZ7 2263 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 WT1P19544 449 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 KLRD1Q13241 179 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 MINOS1Q5TGZ0 78 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 MINOS1-NBL1R4GNA1 71 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 HIVEP3Q5T1R4 2406 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 RBMY1BA6NDE4 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 RBMY1EA6NEQ0 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 RBMY1DP0C7P1 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 RBMY1A1P0DJD3 496 aaKnown RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 RBMY1CP0DJD4 496 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 APOBEC3AP31941 199 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 IL17RELQ6ZVW7 336 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 ANKRD29Q8N6D5 301 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 SPXQ9BT56 116 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 DPH3P1Q9H4G8 78 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 I3L2K1 104 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 RS1O15537 224 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 LY6EQ16553 131 aa4.29□□□□□ -1.72
PTPRD-205ENST00000397611 MRPL53Q96EL3 112 aaKnown RBP4.29□□□□□ -1.72
PTPRD-205ENST00000397611 ZGRF1Q86YA3 2104 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 TRAV13-1A0A0B4J241 112 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 TRGV3P03979 118 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 FAM27E3Q08E93 113 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 SIGLEC15Q6ZMC9 328 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 PTH2Q96A98 100 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 CHD3Q12873 2000 aaKnown RBP4.28□□□□□ -1.72
PTPRD-205ENST00000397611 CSPG4Q6UVK1 2322 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 H3BRN7 92 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 FAM208BQ5VWN6 2430 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 DSCAMO60469 2012 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 BRI3O95415 125 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 IGHV3-73A0A0B4J1V6 119 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 LGALS1P09382 135 aaKnown RBP4.28□□□□□ -1.72
PTPRD-205ENST00000397611 TCTEX1D4Q5JR98 221 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 ZNF491Q8N8L2 437 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 PRO1854Q9UHT4 67 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 PCSK5Q92824 1860 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 A0A087WWL8 130 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 TEX22C9J3V5 150 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 TIMM23O14925 209 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 IGHV3-11P01762 117 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 RITA1Q96K30 269 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 PLXNB1O43157 2135 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 U3KQK5 164 aa4.28□□□□□ -1.72
PTPRD-205ENST00000397611 A0A087WX48 190 aa4.28□□□□□ -1.73
PTPRD-205ENST00000397611 RBAKDNA6NC62 111 aa4.28□□□□□ -1.73
PTPRD-205ENST00000397611 NPBQ8NG41 125 aa4.28□□□□□ -1.73
PTPRD-205ENST00000397611 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.73
PTPRD-205ENST00000397611 DUX5Q96PT3 197 aa4.28□□□□□ -1.73
PTPRD-205ENST00000397611 TMEM126AQ9H061 195 aa4.28□□□□□ -1.73
PTPRD-205ENST00000397611 K7EIM0 57 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-205ENST00000397611 MRGPRG-AS1Q2M3A8 158 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 MRPL36Q9P0J6 103 aaKnown RBP4.27□□□□□ -1.73
PTPRD-205ENST00000397611 HCFC1P51610 2035 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 IGLV2-11P01706 119 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 DTX2Q86UW9 622 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 SPANXB1Q9NS25 103 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-205ENST00000397611 CTSZQ9UBR2 303 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 LY6LH3BQJ8 138 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 FAM106AQ4KMX7 169 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 GDF5OSQ5U4N7 250 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 SRD5A1P18405 259 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 C5orf64Q2M2E5 130 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 MRAPQ8TCY5 172 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 DYNLRB2Q8TF09 96 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 GTSF1Q8WW33 167 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 LINC01619G3V211 115 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
PTPRD-205ENST00000397611 IGLC6P0CF74 106 aa4.27□□□□□ -1.73
PTPRD-205ENST00000397611 NDPQ00604 133 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms