RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-204ENST00000395454 BAGE3Q86Y29 109 aa11.31□□□□□ -0.6
SCAF11-204ENST00000395454 PEMTQ9UBM1 199 aa11.31□□□□□ -0.6
SCAF11-204ENST00000395454 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
SCAF11-204ENST00000395454 LYZL1Q6UWQ5 148 aa11.31□□□□□ -0.6
SCAF11-204ENST00000395454 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
SCAF11-204ENST00000395454 OR8A1Q8NGG7 326 aa11.31□□□□□ -0.6
SCAF11-204ENST00000395454 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
SCAF11-204ENST00000395454 C2orf70A6NJV1 201 aa11.3□□□□□ -0.6
SCAF11-204ENST00000395454 CD33P20138 364 aa11.3□□□□□ -0.6
SCAF11-204ENST00000395454 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
SCAF11-204ENST00000395454 BORCS7Q96B45 105 aa11.3□□□□□ -0.6
SCAF11-204ENST00000395454 IGKV3D-20A0A0C4DH25 116 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 ID1P41134 155 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 RPL11P62913 178 aaKnown RBP11.29□□□□□ -0.6
SCAF11-204ENST00000395454 KCNS1Q96KK3 526 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 NIT2Q9NQR4 276 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 C11orf21Q9P2W6 132 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 K7EQG2 157 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 S100A12P80511 92 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 MS4A6AQ9H2W1 248 aa11.29□□□□□ -0.6
SCAF11-204ENST00000395454 PRR9Q5T870 116 aa11.28□□□□□ -0.6
SCAF11-204ENST00000395454 ADAMTSL5Q6ZMM2 481 aa11.28□□□□□ -0.6
SCAF11-204ENST00000395454 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.6
SCAF11-204ENST00000395454 SAP30O75446 220 aa11.27□□□□□ -0.6
SCAF11-204ENST00000395454 ORM1P02763 201 aa11.27□□□□□ -0.6
SCAF11-204ENST00000395454 ODF3Q96PU9 254 aa11.27□□□□□ -0.6
SCAF11-204ENST00000395454 GPX1P07203 203 aa11.27□□□□□ -0.61
SCAF11-204ENST00000395454 SELENOKQ9Y6D0 94 aa11.27□□□□□ -0.61
SCAF11-204ENST00000395454 CSN3P07498 182 aa11.26□□□□□ -0.61
SCAF11-204ENST00000395454 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-204ENST00000395454 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-204ENST00000395454 U3KQK5 164 aa11.26□□□□□ -0.61
SCAF11-204ENST00000395454 TRAV2A0A0B4J234 112 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 KLLNB2CW77 178 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-204ENST00000395454 CDPF1Q6NVV7 123 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 F6UB75 175 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 SNAI2O43623 268 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 OR5AL1P0C617 328 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 IQCJQ1A5X6 159 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 FAM104BQ5XKR9 115 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 Q6ZWC4 215 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 DYNLRB2Q8TF09 96 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 URB1-AS1Q96HZ7 61 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
SCAF11-204ENST00000395454 IGKV3-7A0A075B6H7 116 aa11.24□□□□□ -0.61
SCAF11-204ENST00000395454 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
SCAF11-204ENST00000395454 IGLL1P15814 213 aa11.24□□□□□ -0.61
SCAF11-204ENST00000395454 DEFB1P60022 68 aa11.24□□□□□ -0.61
SCAF11-204ENST00000395454 SNRPD3P62318 126 aaKnown RBP11.24□□□□□ -0.61
SCAF11-204ENST00000395454 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
SCAF11-204ENST00000395454 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
SCAF11-204ENST00000395454 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
SCAF11-204ENST00000395454 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
SCAF11-204ENST00000395454 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
SCAF11-204ENST00000395454 MED14OSP0DP75 135 aa11.23□□□□□ -0.61
SCAF11-204ENST00000395454 NTF3P20783 257 aa11.23□□□□□ -0.61
SCAF11-204ENST00000395454 SAMD10Q9BYL1 202 aa11.23□□□□□ -0.61
SCAF11-204ENST00000395454 SIGLEC8Q9NYZ4 499 aa11.23□□□□□ -0.61
SCAF11-204ENST00000395454 A0A0J9YX75 114 aa11.22□□□□□ -0.61
SCAF11-204ENST00000395454 C9orf66Q5T8R8 295 aa11.22□□□□□ -0.61
SCAF11-204ENST00000395454 MGAM2Q2M2H8 2515 aa11.22□□□□□ -0.61
SCAF11-204ENST00000395454 AMTP48728 403 aa11.21□□□□□ -0.61
SCAF11-204ENST00000395454 Q6ZQT7 251 aa11.21□□□□□ -0.61
SCAF11-204ENST00000395454 NIT1Q86X76 327 aa11.21□□□□□ -0.61
SCAF11-204ENST00000395454 ZNF688P0C7X2 276 aa11.21□□□□□ -0.62
SCAF11-204ENST00000395454 INSL3P51460 131 aa11.21□□□□□ -0.62
SCAF11-204ENST00000395454 TWIST1Q15672 202 aa11.21□□□□□ -0.62
SCAF11-204ENST00000395454 CD300EQ496F6 205 aaPredicted RBP11.21□□□□□ -0.62
SCAF11-204ENST00000395454 OXLD1Q5BKU9 147 aa11.21□□□□□ -0.62
SCAF11-204ENST00000395454 A8MTW9 85 aa11.2□□□□□ -0.62
SCAF11-204ENST00000395454 CACNG7P62955 275 aa11.2□□□□□ -0.62
SCAF11-204ENST00000395454 DEFB114Q30KQ6 69 aa11.2□□□□□ -0.62
SCAF11-204ENST00000395454 PSMG4Q5JS54 123 aa11.2□□□□□ -0.62
SCAF11-204ENST00000395454 SCRT2Q9NQ03 307 aa11.2□□□□□ -0.62
SCAF11-204ENST00000395454 HSBP1O75506 76 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 IGLV1-51P01701 117 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 FOXI2Q6ZQN5 318 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 AMN1Q8IY45 258 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 MSRB1Q9NZV6 116 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 SORL1Q92673 2214 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 LEPP41159 167 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 MRPL51Q4U2R6 128 aaKnown RBP11.19□□□□□ -0.62
SCAF11-204ENST00000395454 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 ORMDL3Q8N138 153 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 OR10AG1Q8NH19 301 aa11.19□□□□□ -0.62
SCAF11-204ENST00000395454 PCP4L1A6NKN8 68 aa11.18□□□□□ -0.62
SCAF11-204ENST00000395454 DUSP14O95147 198 aaKnown RBP11.18□□□□□ -0.62
SCAF11-204ENST00000395454 PPBPP02775 128 aa11.18□□□□□ -0.62
SCAF11-204ENST00000395454 LINC00614P0C842 121 aa11.18□□□□□ -0.62
SCAF11-204ENST00000395454 PMCHP20382 165 aa11.18□□□□□ -0.62
SCAF11-204ENST00000395454 KIR3DS1Q14943 382 aa11.18□□□□□ -0.62
SCAF11-204ENST00000395454 TDRG1Q3Y452 100 aa11.18□□□□□ -0.62
SCAF11-204ENST00000395454 RNASEKQ6P5S7 137 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms