RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 ZNF705GA8MUZ8 300 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-203ENST00000394157 HTN1P15515 57 aa13.95□□□□□ -0.18
PSEN1-203ENST00000394157 Q6ZQT7 251 aa13.95□□□□□ -0.18
PSEN1-203ENST00000394157 DAZAP1Q96EP5 407 aaKnown RBP13.95□□□□□ -0.18
PSEN1-203ENST00000394157 SDF2L1Q9HCN8 221 aa13.95□□□□□ -0.18
PSEN1-203ENST00000394157 U3KQK5 164 aa13.95□□□□□ -0.18
PSEN1-203ENST00000394157 IGHV4-28A0A0C4DH34 117 aa13.94□□□□□ -0.18
PSEN1-203ENST00000394157 MUC21Q5SSG8 566 aa13.94□□□□□ -0.18
PSEN1-203ENST00000394157 IBA57Q5T440 356 aaKnown RBP13.94□□□□□ -0.18
PSEN1-203ENST00000394157 PRR27Q6MZM9 219 aa13.94□□□□□ -0.18
PSEN1-203ENST00000394157 LINC01551Q86U37 167 aa13.94□□□□□ -0.18
PSEN1-203ENST00000394157 RNASE8Q8TDE3 154 aaKnown RBP13.94□□□□□ -0.18
PSEN1-203ENST00000394157 NAGKQ9UJ70 344 aa13.94□□□□□ -0.18
PSEN1-203ENST00000394157 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
PSEN1-203ENST00000394157 ORM1P02763 201 aa13.93□□□□□ -0.18
PSEN1-203ENST00000394157 C11orf21Q9P2W6 132 aa13.93□□□□□ -0.18
PSEN1-203ENST00000394157 TP53TG3Q9ULZ0 132 aa13.93□□□□□ -0.18
PSEN1-203ENST00000394157 DNAH9Q9NYC9 4486 aa13.93□□□□□ -0.18
PSEN1-203ENST00000394157 C19orf71A6NCJ1 209 aa13.92□□□□□ -0.18
PSEN1-203ENST00000394157 K7EN84 100 aa13.92□□□□□ -0.18
PSEN1-203ENST00000394157 AZU1P20160 251 aa13.92□□□□□ -0.18
PSEN1-203ENST00000394157 FAM231DQ6ZW35 169 aa13.92□□□□□ -0.18
PSEN1-203ENST00000394157 COL7A1Q02388 2944 aa13.91□□□□□ -0.18
PSEN1-203ENST00000394157 B4DEV8 164 aa13.91□□□□□ -0.18
PSEN1-203ENST00000394157 KRBOX1C9JBD0 128 aa13.91□□□□□ -0.18
PSEN1-203ENST00000394157 P01737 135 aa13.91□□□□□ -0.18
PSEN1-203ENST00000394157 CXCL1P09341 107 aa13.91□□□□□ -0.18
PSEN1-203ENST00000394157 NDUFA5Q16718 116 aa13.91□□□□□ -0.18
PSEN1-203ENST00000394157 TENM3Q9P273 2699 aa13.91□□□□□ -0.18
PSEN1-203ENST00000394157 IGKV3D-20A0A0C4DH25 116 aa13.9□□□□□ -0.18
PSEN1-203ENST00000394157 TEX48A0A1B0GUV7 120 aa13.9□□□□□ -0.18
PSEN1-203ENST00000394157 TYMSP04818 313 aa13.9□□□□□ -0.18
PSEN1-203ENST00000394157 RPL23P62829 140 aaKnown RBP13.9□□□□□ -0.18
PSEN1-203ENST00000394157 ZNF415Q09FC8 603 aa13.9□□□□□ -0.18
PSEN1-203ENST00000394157 PNRC1Q12796 327 aaPredicted RBP13.9□□□□□ -0.18
PSEN1-203ENST00000394157 OR5I1Q13606 314 aa13.9□□□□□ -0.18
PSEN1-203ENST00000394157 DNLZQ5SXM8 178 aa13.9□□□□□ -0.18
PSEN1-203ENST00000394157 SNURFLB1AK76 121 aa13.89□□□□□ -0.19
PSEN1-203ENST00000394157 PRM2P04554 102 aa13.89□□□□□ -0.19
PSEN1-203ENST00000394157 TCL1AP56279 114 aa13.89□□□□□ -0.19
PSEN1-203ENST00000394157 RPS20P60866 119 aaKnown RBP13.89□□□□□ -0.19
PSEN1-203ENST00000394157 C11orf72Q8NBR9 251 aa13.89□□□□□ -0.19
PSEN1-203ENST00000394157 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
PSEN1-203ENST00000394157 TIMM8BQ9Y5J9 83 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-203ENST00000394157 IGHV3-16A0A0C4DH30 117 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 PLAC8L1A1L4L8 177 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 XKRY2A2RUG3 117 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 F8W036 122 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 M0R036 132 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 GNRH2O43555 120 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 ASIPP42127 132 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 DAZ2Q13117 558 aaKnown RBP13.88□□□□□ -0.19
PSEN1-203ENST00000394157 ADIRFQ15847 76 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 NUDT10Q8NFP7 164 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 ISOC2Q96AB3 205 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 NUDT11Q96G61 164 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 SPXQ9BT56 116 aa13.88□□□□□ -0.19
PSEN1-203ENST00000394157 A0A0J9YWU9 116 aa13.87□□□□□ -0.19
PSEN1-203ENST00000394157 LYRM9A8MSI8 78 aa13.87□□□□□ -0.19
PSEN1-203ENST00000394157 ERVFC1-1P60608 527 aa13.87□□□□□ -0.19
PSEN1-203ENST00000394157 C15orf54Q8N8G6 183 aa13.87□□□□□ -0.19
PSEN1-203ENST00000394157 GSN-AS1Q9NRJ2 163 aa13.87□□□□□ -0.19
PSEN1-203ENST00000394157 OSTCQ9NRP0 149 aa13.87□□□□□ -0.19
PSEN1-203ENST00000394157 HUWE1Q7Z6Z7 4374 aaKnown RBP13.86□□□□□ -0.19
PSEN1-203ENST00000394157 S100A4P26447 101 aaKnown RBP13.86□□□□□ -0.19
PSEN1-203ENST00000394157 EMP1P54849 157 aa13.86□□□□□ -0.19
PSEN1-203ENST00000394157 CT83Q5H943 113 aa13.86□□□□□ -0.19
PSEN1-203ENST00000394157 OR2D3Q8NGH3 330 aa13.86□□□□□ -0.19
PSEN1-203ENST00000394157 IL17DQ8TAD2 202 aa13.86□□□□□ -0.19
PSEN1-203ENST00000394157 RNASE7Q9H1E1 156 aaKnown RBP13.86□□□□□ -0.19
PSEN1-203ENST00000394157 RPP21Q9H633 154 aaKnown RBP13.86□□□□□ -0.19
PSEN1-203ENST00000394157 MDFICQ9P1T7 246 aa13.86□□□□□ -0.19
PSEN1-203ENST00000394157 DEFB4AO15263 64 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 GATCO43716 136 aaKnown RBP13.85□□□□□ -0.19
PSEN1-203ENST00000394157 SPART-AS1P0CW21 52 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 MED14OSP0DP75 135 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 LGALS9BQ3B8N2 356 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 C10orf91Q5T1B1 145 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 SFRP2Q96HF1 295 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 EDA2RQ9HAV5 297 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 IL36BQ9NZH7 164 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 DKK2Q9UBU2 259 aa13.85□□□□□ -0.19
PSEN1-203ENST00000394157 STAB2Q8WWQ8 2551 aa13.84□□□□□ -0.19
PSEN1-203ENST00000394157 TMSB15BA0A087X1C1 80 aa13.84□□□□□ -0.19
PSEN1-203ENST00000394157 ADCYAP1P18509 176 aa13.84□□□□□ -0.19
PSEN1-203ENST00000394157 C9orf85Q96MD7 179 aa13.84□□□□□ -0.19
PSEN1-203ENST00000394157 CXorf65A6NEN9 183 aa13.83□□□□□ -0.2
PSEN1-203ENST00000394157 RNASE3P12724 160 aaKnown RBP13.83□□□□□ -0.2
PSEN1-203ENST00000394157 RPL19P84098 196 aaKnown RBP13.83□□□□□ -0.2
PSEN1-203ENST00000394157 FAM222AQ5U5X8 452 aa13.83□□□□□ -0.2
PSEN1-203ENST00000394157 ZNF575Q86XF7 245 aa13.83□□□□□ -0.2
PSEN1-203ENST00000394157 PTH2Q96A98 100 aa13.83□□□□□ -0.2
PSEN1-203ENST00000394157 NDUFAF3Q9BU61 184 aa13.83□□□□□ -0.2
PSEN1-203ENST00000394157 NOP10Q9NPE3 64 aaKnown RBP13.83□□□□□ -0.2
PSEN1-203ENST00000394157 CARHSP1Q9Y2V2 147 aaKnown RBP13.83□□□□□ -0.2
PSEN1-203ENST00000394157 GRIFINA4D1Z8 144 aa13.82□□□□□ -0.2
PSEN1-203ENST00000394157 A8MWL6 223 aa13.82□□□□□ -0.2
PSEN1-203ENST00000394157 SPINK4O60575 86 aa13.82□□□□□ -0.2
PSEN1-203ENST00000394157 OR10G8Q8NGN5 311 aa13.82□□□□□ -0.2
PSEN1-203ENST00000394157 C11orf45Q8TAV5 145 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms