RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 F8WEM9 126 aa2.57□□□□□ -2
XRN1-202ENST00000392981 IGKV1D-33P01593 117 aa2.57□□□□□ -2
XRN1-202ENST00000392981 IGKV1-33P01594 117 aa2.57□□□□□ -2
XRN1-202ENST00000392981 PSG9Q00887 426 aa2.57□□□□□ -2
XRN1-202ENST00000392981 PSG7Q13046 419 aa2.57□□□□□ -2
XRN1-202ENST00000392981 CDK5R1Q15078 307 aa2.57□□□□□ -2
XRN1-202ENST00000392981 ZNF56Q15929 161 aa2.57□□□□□ -2
XRN1-202ENST00000392981 DYNLRB2Q8TF09 96 aa2.57□□□□□ -2
XRN1-202ENST00000392981 NABP2Q9BQ15 211 aa2.57□□□□□ -2
XRN1-202ENST00000392981 TXNDC17Q9BRA2 123 aa2.57□□□□□ -2
XRN1-202ENST00000392981 PDE4DIPQ5VU43 2346 aa2.57□□□□□ -2
XRN1-202ENST00000392981 IGKV3OR2-268A0A0C4DH90 116 aa2.56□□□□□ -2
XRN1-202ENST00000392981 C9JCJ5 164 aa2.56□□□□□ -2
XRN1-202ENST00000392981 NDUFB6O95139 128 aa2.56□□□□□ -2
XRN1-202ENST00000392981 GATA2P23769 480 aaPredicted RBP2.56□□□□□ -2
XRN1-202ENST00000392981 SPINT3P49223 89 aa2.56□□□□□ -2
XRN1-202ENST00000392981 NANOS3P60323 173 aaKnown RBP2.56□□□□□ -2
XRN1-202ENST00000392981 C2orf82Q6UX34 121 aa2.56□□□□□ -2
XRN1-202ENST00000392981 SMIM29Q86T20 159 aa2.56□□□□□ -2
XRN1-202ENST00000392981 TMEM242Q9NWH2 141 aa2.56□□□□□ -2
XRN1-202ENST00000392981 HILPDAQ9Y5L2 63 aa2.56□□□□□ -2
XRN1-202ENST00000392981 PIKFYVEQ9Y2I7 2098 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IGHV3-73A0A0B4J1V6 119 aa2.56□□□□□ -2
XRN1-202ENST00000392981 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
XRN1-202ENST00000392981 HYPMO75409 117 aa2.56□□□□□ -2
XRN1-202ENST00000392981 MDKP21741 143 aaPredicted RBP2.56□□□□□ -2
XRN1-202ENST00000392981 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IGLV3-21P80748 117 aaPredicted RBP2.56□□□□□ -2
XRN1-202ENST00000392981 FAM104BQ5XKR9 115 aa2.56□□□□□ -2
XRN1-202ENST00000392981 COMMD6Q7Z4G1 85 aa2.56□□□□□ -2
XRN1-202ENST00000392981 RNF182Q8N6D2 247 aa2.56□□□□□ -2
XRN1-202ENST00000392981 SPTSSBQ8NFR3 76 aa2.56□□□□□ -2
XRN1-202ENST00000392981 SMIM4Q8WVI0 70 aa2.56□□□□□ -2
XRN1-202ENST00000392981 DOCK3Q8IZD9 2030 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IGHV3-72A0A0B4J1Y9 119 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IGKV1-6A0A0C4DH72 117 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IGKV1-12A0A0C4DH73 117 aa2.56□□□□□ -2
XRN1-202ENST00000392981 CTXND1A0A1B0GTU2 59 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IZUMO1RA6ND01 250 aa2.56□□□□□ -2
XRN1-202ENST00000392981 YPEL1O60688 119 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IGKV1D-12P01611 117 aa2.56□□□□□ -2
XRN1-202ENST00000392981 HMGN2P05204 90 aaKnown RBP2.56□□□□□ -2
XRN1-202ENST00000392981 IGLC2P0DOY2 106 aa2.56□□□□□ -2
XRN1-202ENST00000392981 IGLC3P0DOY3 106 aa2.56□□□□□ -2
XRN1-202ENST00000392981 COL10A1Q03692 680 aa2.56□□□□□ -2
XRN1-202ENST00000392981 LINC00303Q3SY05 128 aa2.56□□□□□ -2
XRN1-202ENST00000392981 C18orf65Q6ZTR6 163 aa2.56□□□□□ -2
XRN1-202ENST00000392981 NOTCH2NLQ7Z3S9 236 aa2.56□□□□□ -2
XRN1-202ENST00000392981 RPS19BP1Q86WX3 136 aaKnown RBP2.56□□□□□ -2
XRN1-202ENST00000392981 U3KQK5 164 aa2.56□□□□□ -2
XRN1-202ENST00000392981 ZNF318Q5VUA4 2279 aa2.56□□□□□ -2
XRN1-202ENST00000392981 BRWD1Q9NSI6 2320 aa2.56□□□□□ -2
XRN1-202ENST00000392981 C3orf85A0A1B0GTC6 90 aa2.56□□□□□ -2
XRN1-202ENST00000392981 M0R2P5 195 aa2.56□□□□□ -2
XRN1-202ENST00000392981 SFT2D2O95562 160 aa2.56□□□□□ -2
XRN1-202ENST00000392981 SYCNQ0VAF6 134 aa2.56□□□□□ -2
XRN1-202ENST00000392981 C10orf113Q5VZT2 155 aa2.56□□□□□ -2
XRN1-202ENST00000392981 C10orf111Q8N326 155 aa2.56□□□□□ -2
XRN1-202ENST00000392981 TAS2R4Q9NYW5 299 aa2.56□□□□□ -2
XRN1-202ENST00000392981 TOMM7Q9P0U1 55 aa2.56□□□□□ -2
XRN1-202ENST00000392981 NCOR1O75376 2440 aa2.56□□□□□ -2
XRN1-202ENST00000392981 DOCK1Q14185 1865 aa2.56□□□□□ -2
XRN1-202ENST00000392981 FNDC10F2Z333 226 aa2.55□□□□□ -2
XRN1-202ENST00000392981 IGLV3-27P01718 113 aa2.55□□□□□ -2
XRN1-202ENST00000392981 PRIMA1Q86XR5 153 aa2.55□□□□□ -2
XRN1-202ENST00000392981 LINC01555Q8NAE3 123 aa2.55□□□□□ -2
XRN1-202ENST00000392981 DEFB108BQ8NET1 73 aa2.55□□□□□ -2
XRN1-202ENST00000392981 TRIP11Q15643 1979 aa2.55□□□□□ -2
XRN1-202ENST00000392981 TRBV24-1A0A075B6N3 115 aa2.55□□□□□ -2
XRN1-202ENST00000392981 LOC107986453A0A1B0GWG9 222 aa2.55□□□□□ -2
XRN1-202ENST00000392981 CCL16O15467 120 aa2.55□□□□□ -2
XRN1-202ENST00000392981 IGHV3-7P01780 117 aa2.55□□□□□ -2
XRN1-202ENST00000392981 ASAH2BP0C7U1 165 aa2.55□□□□□ -2
XRN1-202ENST00000392981 LOXL1Q08397 574 aaPredicted RBP2.55□□□□□ -2
XRN1-202ENST00000392981 DEFB116Q30KQ4 102 aa2.55□□□□□ -2
XRN1-202ENST00000392981 MRPL51Q4U2R6 128 aaKnown RBP2.55□□□□□ -2
XRN1-202ENST00000392981 Q8N976 141 aa2.55□□□□□ -2
XRN1-202ENST00000392981 ST20Q9HBF5 79 aa2.55□□□□□ -2
XRN1-202ENST00000392981 ATG2BQ96BY7 2078 aa2.55□□□□□ -2
XRN1-202ENST00000392981 IGKV3D-11A0A0A0MRZ8 115 aa2.55□□□□□ -2
XRN1-202ENST00000392981 LY6HO94772 140 aa2.55□□□□□ -2
XRN1-202ENST00000392981 HBDP02042 147 aa2.55□□□□□ -2
XRN1-202ENST00000392981 IGKV3-11P04433 115 aa2.55□□□□□ -2
XRN1-202ENST00000392981 PEBP1P30086 187 aaKnown RBP2.55□□□□□ -2
XRN1-202ENST00000392981 RNASE13Q5GAN3 156 aaKnown RBP2.55□□□□□ -2
XRN1-202ENST00000392981 UBL5Q9BZL1 73 aa2.55□□□□□ -2
XRN1-202ENST00000392981 RABAC1Q9UI14 185 aa2.55□□□□□ -2
XRN1-202ENST00000392981 DNAJC13O75165 2243 aa2.55□□□□□ -2
XRN1-202ENST00000392981 DOCK5Q9H7D0 1870 aa2.55□□□□□ -2
XRN1-202ENST00000392981 PRRC2CQ9Y520 2896 aaKnown RBP2.55□□□□□ -2
XRN1-202ENST00000392981 A0A087X002 238 aa2.55□□□□□ -2
XRN1-202ENST00000392981 TMEM30CPA0ZSE6 113 aa2.55□□□□□ -2
XRN1-202ENST00000392981 PYYP10082 97 aa2.55□□□□□ -2
XRN1-202ENST00000392981 SNRPD3P62318 126 aaKnown RBP2.55□□□□□ -2
XRN1-202ENST00000392981 KRTAP27-1Q3LI81 207 aa2.55□□□□□ -2
XRN1-202ENST00000392981 ZNF329Q86UD4 541 aa2.55□□□□□ -2
XRN1-202ENST00000392981 MIR7-3HGQ8N6C7 128 aa2.55□□□□□ -2
XRN1-202ENST00000392981 LINC01006Q8NI28 216 aa2.55□□□□□ -2
XRN1-202ENST00000392981 MYO18AQ92614 2054 aaKnown RBP2.55□□□□□ -2
XRN1-202ENST00000392981 CSRP1P21291 193 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms