RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 TEX22C9J3V5 150 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 IGKV1-17P01599 117 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 SIGLEC8Q9NYZ4 499 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 TSPAN13O95857 204 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 CTSGP08311 255 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 GATD1Q8NB37 220 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 PAX4O43316 350 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 IGF2BP2-AS1Q96M15 143 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 PRORYQ9H606 182 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 NCOR2Q9Y618 2525 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 WNK1Q9H4A3 2382 aa11.35□□□□□ -0.59
PSME4-201ENST00000389993 DAD1P61803 113 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 ATRXP46100 2492 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 UNQ9165/PRO28630Q6UXU0 137 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 J3QLI3 93 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 POU2AF1Q16633 256 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 RASL11AQ6T310 242 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 EREGO14944 169 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 PROP1O75360 226 aa11.34□□□□□ -0.59
PSME4-201ENST00000389993 SDHAF1A6NFY7 115 aa11.33□□□□□ -0.59
PSME4-201ENST00000389993 BRWD1-AS2P59051 145 aa11.33□□□□□ -0.59
PSME4-201ENST00000389993 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.6
PSME4-201ENST00000389993 PFN2P35080 140 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 SAMD5Q5TGI4 173 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 LTAP01374 205 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 IGLV11-55A0A075B6I3 123 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 ZNF492Q9P255 531 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 UNC80Q8N2C7 3258 aa11.33□□□□□ -0.6
PSME4-201ENST00000389993 K7EMI3 77 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 SMPXQ9UHP9 88 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 NPBQ8NG41 125 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.32□□□□□ -0.6
PSME4-201ENST00000389993 IGKV2-29A2NJV5 120 aaPredicted RBP11.32□□□□□ -0.6
PSME4-201ENST00000389993 PSCAO43653 123 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 NUPR1O60356 82 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 ACACBO00763 2458 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 C10orf99Q6UWK7 81 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 DKK2Q9UBU2 259 aa11.32□□□□□ -0.6
PSME4-201ENST00000389993 ESDP10768 282 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 C10orf91Q5T1B1 145 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 Q6ZQT7 251 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 ZNF479Q96JC4 524 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 IGLV1-47P01700 117 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 GP9P14770 177 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
PSME4-201ENST00000389993 COPS9Q8WXC6 57 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 CDH23Q9H251 3354 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
PSME4-201ENST00000389993 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
PSME4-201ENST00000389993 A8MWP6 167 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 U3KQE9 123 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 WFDC11Q8NEX6 87 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 TIMM21Q9BVV7 248 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 M0R2P5 195 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 C1QTNF4Q9BXJ3 329 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 MRPL27Q9P0M9 148 aaKnown RBP11.3□□□□□ -0.6
PSME4-201ENST00000389993 TNCP24821 2201 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
PSME4-201ENST00000389993 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
PSME4-201ENST00000389993 NXPH4O95158 308 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
PSME4-201ENST00000389993 RBMY1A1P0DJD3 496 aaKnown RBP11.3□□□□□ -0.6
PSME4-201ENST00000389993 RBMY1CP0DJD4 496 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 CHAC1Q9BUX1 264 aa11.3□□□□□ -0.6
PSME4-201ENST00000389993 KLF2Q9Y5W3 355 aaPredicted RBP11.3□□□□□ -0.6
PSME4-201ENST00000389993 SPINK8P0C7L1 97 aa11.29□□□□□ -0.6
PSME4-201ENST00000389993 PLNP26678 52 aa11.29□□□□□ -0.6
PSME4-201ENST00000389993 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
PSME4-201ENST00000389993 XIRP2A4UGR9 3374 aa11.29□□□□□ -0.6
PSME4-201ENST00000389993 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
PSME4-201ENST00000389993 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
PSME4-201ENST00000389993 LGALS1P09382 135 aaKnown RBP11.29□□□□□ -0.6
PSME4-201ENST00000389993 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
PSME4-201ENST00000389993 Q6ZVH6 145 aa11.28□□□□□ -0.6
PSME4-201ENST00000389993 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
PSME4-201ENST00000389993 PRUNE2Q8WUY3 3088 aa11.28□□□□□ -0.6
PSME4-201ENST00000389993 CITED2Q99967 270 aaPredicted RBP11.28□□□□□ -0.6
PSME4-201ENST00000389993 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
PSME4-201ENST00000389993 HSD52Q0P140 79 aa11.28□□□□□ -0.6
PSME4-201ENST00000389993 MRPL35Q9NZE8 188 aaKnown RBP11.28□□□□□ -0.6
PSME4-201ENST00000389993 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
PSME4-201ENST00000389993 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.6
PSME4-201ENST00000389993 I3L3M4 83 aa11.27□□□□□ -0.6
PSME4-201ENST00000389993 ELANEP08246 267 aa11.27□□□□□ -0.6
PSME4-201ENST00000389993 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.6
PSME4-201ENST00000389993 CST9LQ9H4G1 147 aa11.27□□□□□ -0.6
PSME4-201ENST00000389993 ERG28Q9UKR5 140 aa11.27□□□□□ -0.6
PSME4-201ENST00000389993 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.6
PSME4-201ENST00000389993 Q0VG73 95 aa11.27□□□□□ -0.61
PSME4-201ENST00000389993 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
PSME4-201ENST00000389993 CHD7Q9P2D1 2997 aa11.27□□□□□ -0.61
PSME4-201ENST00000389993 K7ERJ3 54 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms