RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NAGKQ9UJ70 344 aa14.84□□□□□ -0.03
PDLIM5-205ENST00000380180 A0A0J9YX75 114 aa14.83□□□□□ -0.03
PDLIM5-205ENST00000380180 AMTP48728 403 aa14.83□□□□□ -0.03
PDLIM5-205ENST00000380180 FAM104BQ5XKR9 115 aa14.83□□□□□ -0.03
PDLIM5-205ENST00000380180 NIT1Q86X76 327 aa14.83□□□□□ -0.03
PDLIM5-205ENST00000380180 AMN1Q8IY45 258 aa14.83□□□□□ -0.03
PDLIM5-205ENST00000380180 ZNF324O75467 553 aaPredicted RBP14.83□□□□□ -0.04
PDLIM5-205ENST00000380180 PMCHP20382 165 aa14.83□□□□□ -0.04
PDLIM5-205ENST00000380180 FAM19A2Q8N3H0 131 aa14.83□□□□□ -0.04
PDLIM5-205ENST00000380180 URB1-AS1Q96HZ7 61 aa14.83□□□□□ -0.04
PDLIM5-205ENST00000380180 KLLNB2CW77 178 aa14.82□□□□□ -0.04
PDLIM5-205ENST00000380180 Q6ZWC4 215 aa14.82□□□□□ -0.04
PDLIM5-205ENST00000380180 EBLN2Q6P2I7 272 aa14.82□□□□□ -0.04
PDLIM5-205ENST00000380180 RNASEKQ6P5S7 137 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-205ENST00000380180 TSSC4Q9Y5U2 329 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-205ENST00000380180 CCL24O00175 119 aa14.81□□□□□ -0.04
PDLIM5-205ENST00000380180 FHL3Q13643 280 aa14.81□□□□□ -0.04
PDLIM5-205ENST00000380180 DNLZQ5SXM8 178 aa14.81□□□□□ -0.04
PDLIM5-205ENST00000380180 OR10AG1Q8NH19 301 aa14.81□□□□□ -0.04
PDLIM5-205ENST00000380180 TMEM191AQ9H0A3 160 aa14.81□□□□□ -0.04
PDLIM5-205ENST00000380180 HSBP1O75506 76 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 OR5AL1P0C617 328 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 ANXA2RQ3ZCQ2 193 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 TMEM61Q8N0U2 210 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 JMJD8Q96S16 334 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 SETXQ7Z333 2677 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 IGKV3-20P01619 116 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 MRPL51Q4U2R6 128 aaKnown RBP14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 GSN-AS1Q9NRJ2 163 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 RNF114Q9Y508 228 aa14.8□□□□□ -0.04
PDLIM5-205ENST00000380180 D6R8Y8 96 aa14.79□□□□□ -0.04
PDLIM5-205ENST00000380180 H3BVH4 76 aa14.79□□□□□ -0.04
PDLIM5-205ENST00000380180 SNAI2O43623 268 aa14.79□□□□□ -0.04
PDLIM5-205ENST00000380180 NDUFA7O95182 113 aa14.79□□□□□ -0.04
PDLIM5-205ENST00000380180 DEFB114Q30KQ6 69 aa14.79□□□□□ -0.04
PDLIM5-205ENST00000380180 DYNLRB2Q8TF09 96 aa14.79□□□□□ -0.04
PDLIM5-205ENST00000380180 ODF3Q96PU9 254 aa14.78□□□□□ -0.04
PDLIM5-205ENST00000380180 U3KQK5 164 aa14.78□□□□□ -0.04
PDLIM5-205ENST00000380180 INAFM1C9JVW0 142 aa14.78□□□□□ -0.04
PDLIM5-205ENST00000380180 LINC00614P0C842 121 aa14.78□□□□□ -0.04
PDLIM5-205ENST00000380180 FOXI2Q6ZQN5 318 aa14.78□□□□□ -0.04
PDLIM5-205ENST00000380180 SCGB1D1O95968 90 aa14.77□□□□□ -0.04
PDLIM5-205ENST00000380180 LEPP41159 167 aa14.77□□□□□ -0.04
PDLIM5-205ENST00000380180 DMRTA1Q5VZB9 504 aa14.77□□□□□ -0.04
PDLIM5-205ENST00000380180 TIMM8BQ9Y5J9 83 aaPredicted RBP14.77□□□□□ -0.04
PDLIM5-205ENST00000380180 TRAV2A0A0B4J234 112 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 GNRH2O43555 120 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 RAB4AP20338 218 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 ORMDL3Q8N138 153 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 CHCHD1Q96BP2 118 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 RNF185Q96GF1 192 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 MUC4Q99102 2169 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 IGHV4-4A0A075B6R2 117 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 TRAV12-3A0A0B4J271 114 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 DUSP14O95147 198 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 S100A4P26447 101 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 ASIPP42127 132 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 PROK1P58294 105 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 DEFB131AP59861 70 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 CD300EQ496F6 205 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 SPANXN1Q5VSR9 72 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 PRELID3AQ96N28 172 aa14.76□□□□□ -0.05
PDLIM5-205ENST00000380180 C7orf71A4D174 169 aa14.75□□□□□ -0.05
PDLIM5-205ENST00000380180 M0R2Z0 102 aa14.75□□□□□ -0.05
PDLIM5-205ENST00000380180 CKS2P33552 79 aa14.75□□□□□ -0.05
PDLIM5-205ENST00000380180 CACNG7P62955 275 aa14.75□□□□□ -0.05
PDLIM5-205ENST00000380180 SMKR1H3BMG3 65 aa14.75□□□□□ -0.05
PDLIM5-205ENST00000380180 EVI2AP22794 236 aa14.75□□□□□ -0.05
PDLIM5-205ENST00000380180 NSD1Q96L73 2696 aaPredicted RBP14.74□□□□□ -0.05
PDLIM5-205ENST00000380180 HIVEP1P15822 2718 aa14.74□□□□□ -0.05
PDLIM5-205ENST00000380180 TRAV12-2A0A075B6T6 113 aa14.74□□□□□ -0.05
PDLIM5-205ENST00000380180 CDKN1BP46527 198 aa14.74□□□□□ -0.05
PDLIM5-205ENST00000380180 PMCHL1Q16048 86 aa14.74□□□□□ -0.05
PDLIM5-205ENST00000380180 SPINK13Q1W4C9 94 aa14.74□□□□□ -0.05
PDLIM5-205ENST00000380180 FAM159AQ6UWV7 190 aa14.74□□□□□ -0.05
PDLIM5-205ENST00000380180 KNCNA6PVL3 124 aa14.73□□□□□ -0.05
PDLIM5-205ENST00000380180 SPRY2O43597 315 aa14.73□□□□□ -0.05
PDLIM5-205ENST00000380180 KRTDAPP60985 99 aa14.73□□□□□ -0.05
PDLIM5-205ENST00000380180 S100A12P80511 92 aa14.73□□□□□ -0.05
PDLIM5-205ENST00000380180 TSPOP30536 169 aa14.73□□□□□ -0.05
PDLIM5-205ENST00000380180 AMTNQ6UX39 209 aa14.73□□□□□ -0.05
PDLIM5-205ENST00000380180 NCR2O95944 276 aa14.72□□□□□ -0.05
PDLIM5-205ENST00000380180 RNASE3P12724 160 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-205ENST00000380180 ZNF124Q15973 351 aa14.72□□□□□ -0.05
PDLIM5-205ENST00000380180 PRSS3P2Q8NHM4 247 aa14.72□□□□□ -0.05
PDLIM5-205ENST00000380180 IGHV1-24A0A0C4DH33 117 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 MED14OSP0DP75 135 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 SMIM15Q7Z3B0 74 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 SCRT2Q9NQ03 307 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 PHLDA3Q9Y5J5 127 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 FN1P02751 2386 aaKnown RBP14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 LOC389332A0A1B0GUA5 103 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 ADARB2-AS1A8MUL3 147 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 M0R381 172 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 TCF21O43680 179 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 GAS8-AS1O95177 125 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 NPYP01303 97 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 FOSL1P15407 271 aa14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 IFI27P40305 119 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-205ENST00000380180 ZNF256Q9Y2P7 627 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms