RNA–Protein interactions for RNA: ENST00000379370.6

AGRN-201, Transcript of agrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AGRN, Length 7,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-201ENST00000379370 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
AGRN-201ENST00000379370 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
AGRN-201ENST00000379370 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
AGRN-201ENST00000379370 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
AGRN-201ENST00000379370 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
AGRN-201ENST00000379370 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
AGRN-201ENST00000379370 ZNF524Q96C55 264 aa11.28□□□□□ -0.6
AGRN-201ENST00000379370 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
AGRN-201ENST00000379370 IGKV1-6A0A0C4DH72 117 aa11.27□□□□□ -0.61
AGRN-201ENST00000379370 TINCRA0A1B0GVN0 87 aa11.27□□□□□ -0.61
AGRN-201ENST00000379370 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
AGRN-201ENST00000379370 CAMK2N2Q96S95 79 aa11.27□□□□□ -0.61
AGRN-201ENST00000379370 IGHV2-70P01814 119 aa11.27□□□□□ -0.61
AGRN-201ENST00000379370 DSCAMO60469 2012 aa11.27□□□□□ -0.61
AGRN-201ENST00000379370 UBE2AP49459 152 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 TRBV19A0A075B6N1 114 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 ETDCA0A1B0GVM5 59 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 FGF16O43320 207 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 PROP1O75360 226 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 SRSF2Q01130 221 aaKnown RBP11.26□□□□□ -0.61
AGRN-201ENST00000379370 RNF138Q8WVD3 245 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 FOXE3Q13461 319 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
AGRN-201ENST00000379370 FHL1Q13642 323 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 WFDC11Q8NEX6 87 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 RNF183Q96D59 192 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 IGHV4OR15-8A0A075B7B6 117 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 A0A087WW49 117 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 SOCS3O14543 225 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 FOXI2Q6ZQN5 318 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 WT1-ASQ06250 92 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 NPBQ8NG41 125 aa11.25□□□□□ -0.61
AGRN-201ENST00000379370 C1orf194Q5T5A4 169 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 WIPF2Q8TF74 440 aaPredicted RBP11.24□□□□□ -0.61
AGRN-201ENST00000379370 TMEM131Q92545 1883 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 CTSZQ9UBR2 303 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 MRPL23Q16540 153 aaKnown RBP11.24□□□□□ -0.61
AGRN-201ENST00000379370 CFHR4Q92496 578 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 RS1O15537 224 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 PRR25Q96S07 402 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 ADAMTSL5Q6ZMM2 481 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 Q6ZS49 121 aa11.24□□□□□ -0.61
AGRN-201ENST00000379370 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
AGRN-201ENST00000379370 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
AGRN-201ENST00000379370 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
AGRN-201ENST00000379370 PLXNB3Q9ULL4 1909 aa11.23□□□□□ -0.61
AGRN-201ENST00000379370 ATP5G1P05496 136 aa11.23□□□□□ -0.61
AGRN-201ENST00000379370 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
AGRN-201ENST00000379370 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
AGRN-201ENST00000379370 PCP4P48539 62 aa11.22□□□□□ -0.61
AGRN-201ENST00000379370 C9orf153Q5TBE3 101 aa11.22□□□□□ -0.61
AGRN-201ENST00000379370 GTSF1Q8WW33 167 aa11.22□□□□□ -0.61
AGRN-201ENST00000379370 NDUFA12Q9UI09 145 aa11.22□□□□□ -0.61
AGRN-201ENST00000379370 COL4A4P53420 1690 aaPredicted RBP11.22□□□□□ -0.61
AGRN-201ENST00000379370 H3BRN7 92 aa11.22□□□□□ -0.61
AGRN-201ENST00000379370 C15orf65H3BRN8 121 aa11.22□□□□□ -0.61
AGRN-201ENST00000379370 Q8NFD4 153 aa11.22□□□□□ -0.61
AGRN-201ENST00000379370 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.61
AGRN-201ENST00000379370 HIST2H2BDQ6DRA6 164 aa11.21□□□□□ -0.61
AGRN-201ENST00000379370 FNDC10F2Z333 226 aa11.21□□□□□ -0.61
AGRN-201ENST00000379370 LINC01559Q495D7 138 aa11.21□□□□□ -0.61
AGRN-201ENST00000379370 ATP6V0E2Q8NHE4 81 aa11.21□□□□□ -0.61
AGRN-201ENST00000379370 TMEM141Q96I45 108 aa11.21□□□□□ -0.61
AGRN-201ENST00000379370 SEM1Q6ZVN7 128 aa11.21□□□□□ -0.61
AGRN-201ENST00000379370 C10orf105Q8TEF2 133 aa11.21□□□□□ -0.62
AGRN-201ENST00000379370 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.62
AGRN-201ENST00000379370 PRSS46E5RG02 174 aa11.21□□□□□ -0.62
AGRN-201ENST00000379370 VOPP1Q96AW1 172 aa11.21□□□□□ -0.62
AGRN-201ENST00000379370 HIST1H2BLQ99880 126 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 KIR3DS1Q14943 382 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 LINC00311Q8N616 119 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 IGHG4P01861 327 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 C3orf79P0CE67 100 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 ZFAND6Q6FIF0 208 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 DYNAPQ8N1N2 210 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 CEP192Q8TEP8 1941 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
AGRN-201ENST00000379370 IGFL2Q6UWQ7 119 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 C16orf74Q96GX8 76 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 ZNF106Q9H2Y7 1883 aaKnown RBP11.19□□□□□ -0.62
AGRN-201ENST00000379370 RITA1Q96K30 269 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 NDUFAF3Q9BU61 184 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 HERVK_113P63121 156 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 PRORYQ9H606 182 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 FAM110AQ9BQ89 295 aa11.19□□□□□ -0.62
AGRN-201ENST00000379370 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
AGRN-201ENST00000379370 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
AGRN-201ENST00000379370 KIAA1549LQ6ZVL6 1849 aa11.18□□□□□ -0.62
AGRN-201ENST00000379370 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms