RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 TXNDC17Q9BRA2 123 aa11.74□□□□□ -0.53
HLA-A-201ENST00000376802 FLG2Q5D862 2391 aaPredicted RBP11.74□□□□□ -0.53
HLA-A-201ENST00000376802 C9JCJ5 164 aa11.73□□□□□ -0.53
HLA-A-201ENST00000376802 CRYGDP07320 174 aa11.73□□□□□ -0.53
HLA-A-201ENST00000376802 KHDC3LQ587J8 217 aa11.73□□□□□ -0.53
HLA-A-201ENST00000376802 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
HLA-A-201ENST00000376802 PPP1R1CQ8WVI7 109 aa11.73□□□□□ -0.53
HLA-A-201ENST00000376802 NAGKQ9UJ70 344 aa11.73□□□□□ -0.53
HLA-A-201ENST00000376802 HSPB11Q9Y547 144 aa11.73□□□□□ -0.53
HLA-A-201ENST00000376802 PGPA6NDG6 321 aa11.72□□□□□ -0.53
HLA-A-201ENST00000376802 M0R2P5 195 aa11.72□□□□□ -0.53
HLA-A-201ENST00000376802 GCSHP23434 173 aa11.72□□□□□ -0.53
HLA-A-201ENST00000376802 FRZBQ92765 325 aa11.72□□□□□ -0.53
HLA-A-201ENST00000376802 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
HLA-A-201ENST00000376802 MYCBP2O75592 4640 aa11.71□□□□□ -0.53
HLA-A-201ENST00000376802 LRCOL1A6NCL2 159 aa11.71□□□□□ -0.53
HLA-A-201ENST00000376802 MPC2O95563 127 aa11.71□□□□□ -0.53
HLA-A-201ENST00000376802 GATA1P15976 413 aaPredicted RBP11.71□□□□□ -0.53
HLA-A-201ENST00000376802 TIRAPP58753 221 aa11.71□□□□□ -0.53
HLA-A-201ENST00000376802 TAS2R45P59539 299 aa11.71□□□□□ -0.53
HLA-A-201ENST00000376802 MBD2Q9UBB5 411 aa11.71□□□□□ -0.53
HLA-A-201ENST00000376802 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
HLA-A-201ENST00000376802 SMR3BP02814 79 aaPredicted RBP11.7□□□□□ -0.54
HLA-A-201ENST00000376802 TYMSP04818 313 aa11.7□□□□□ -0.54
HLA-A-201ENST00000376802 GOLT1AQ6ZVE7 132 aa11.7□□□□□ -0.54
HLA-A-201ENST00000376802 C10orf126Q8N4M7 172 aa11.7□□□□□ -0.54
HLA-A-201ENST00000376802 WFDC1Q9HC57 220 aa11.7□□□□□ -0.54
HLA-A-201ENST00000376802 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
HLA-A-201ENST00000376802 TRAV21A0A0B4J279 112 aa11.69□□□□□ -0.54
HLA-A-201ENST00000376802 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
HLA-A-201ENST00000376802 F6UZH7 168 aa11.69□□□□□ -0.54
HLA-A-201ENST00000376802 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
HLA-A-201ENST00000376802 CMTM2Q8TAZ6 248 aa11.69□□□□□ -0.54
HLA-A-201ENST00000376802 SMIM3Q9BZL3 60 aa11.69□□□□□ -0.54
HLA-A-201ENST00000376802 ALG5Q9Y673 324 aa11.69□□□□□ -0.54
HLA-A-201ENST00000376802 hCG_2014768A0A024R1R8 64 aa11.68□□□□□ -0.54
HLA-A-201ENST00000376802 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
HLA-A-201ENST00000376802 HAMPP81172 84 aa11.68□□□□□ -0.54
HLA-A-201ENST00000376802 LINC01556Q5JQF7 62 aa11.68□□□□□ -0.54
HLA-A-201ENST00000376802 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
HLA-A-201ENST00000376802 SCGB1C1Q8TD33 95 aa11.68□□□□□ -0.54
HLA-A-201ENST00000376802 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
HLA-A-201ENST00000376802 GNG5P63218 68 aa11.67□□□□□ -0.54
HLA-A-201ENST00000376802 FAM74A1Q5RGS3 127 aa11.67□□□□□ -0.54
HLA-A-201ENST00000376802 PQLC2Q6ZP29 291 aa11.67□□□□□ -0.54
HLA-A-201ENST00000376802 SLC25A29Q8N8R3 303 aa11.67□□□□□ -0.54
HLA-A-201ENST00000376802 NHLRC2Q8NBF2 726 aa11.67□□□□□ -0.54
HLA-A-201ENST00000376802 SDF2L1Q9HCN8 221 aa11.67□□□□□ -0.54
HLA-A-201ENST00000376802 C11orf21Q9P2W6 132 aa11.67□□□□□ -0.54
HLA-A-201ENST00000376802 IBA57-AS1B1ANH7 110 aa11.66□□□□□ -0.54
HLA-A-201ENST00000376802 RAB2AP61019 212 aa11.66□□□□□ -0.54
HLA-A-201ENST00000376802 DPPA3Q6W0C5 159 aa11.66□□□□□ -0.54
HLA-A-201ENST00000376802 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
HLA-A-201ENST00000376802 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.54
HLA-A-201ENST00000376802 PPT1P50897 306 aa11.65□□□□□ -0.54
HLA-A-201ENST00000376802 ZNF80P51504 273 aaPredicted RBP11.65□□□□□ -0.54
HLA-A-201ENST00000376802 ACOT6Q3I5F7 207 aaPredicted RBP11.65□□□□□ -0.54
HLA-A-201ENST00000376802 ZNF876PQ49A33 203 aa11.65□□□□□ -0.54
HLA-A-201ENST00000376802 CFAP126Q5VTH2 177 aa11.65□□□□□ -0.54
HLA-A-201ENST00000376802 ASB13Q8WXK3 278 aa11.65□□□□□ -0.54
HLA-A-201ENST00000376802 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
HLA-A-201ENST00000376802 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
HLA-A-201ENST00000376802 FBLL1A6NHQ2 334 aaKnown RBP11.64□□□□□ -0.55
HLA-A-201ENST00000376802 HMGB3O15347 200 aaKnown RBP11.64□□□□□ -0.55
HLA-A-201ENST00000376802 PSCAO43653 123 aa11.64□□□□□ -0.55
HLA-A-201ENST00000376802 PFN1P07737 140 aaKnown RBP11.64□□□□□ -0.55
HLA-A-201ENST00000376802 PET100P0DJ07 73 aa11.64□□□□□ -0.55
HLA-A-201ENST00000376802 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
HLA-A-201ENST00000376802 FAM30AQ9NZY2 134 aa11.64□□□□□ -0.55
HLA-A-201ENST00000376802 A0A1W2PPV4 95 aa11.63□□□□□ -0.55
HLA-A-201ENST00000376802 RS1O15537 224 aa11.63□□□□□ -0.55
HLA-A-201ENST00000376802 Q8N814 137 aa11.63□□□□□ -0.55
HLA-A-201ENST00000376802 MED28Q9H204 178 aa11.63□□□□□ -0.55
HLA-A-201ENST00000376802 IGHV3-73A0A0B4J1V6 119 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 TRAV8-6A0A0B4J262 113 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 TRBV6-4A0A1B0GX49 114 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 SSNA1O43805 119 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 ARL14EPLP0DKL9 152 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 OR10G9Q8NGN4 311 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 OR10G7Q8NGN6 311 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 C9orf85Q96MD7 179 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 Q9HAA7 133 aa11.62□□□□□ -0.55
HLA-A-201ENST00000376802 FAM229AH3BQW9 127 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 CIDEAO60543 219 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 PFDN1O60925 122 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 IGLV2-11P01706 119 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 RHOHQ15669 191 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 OR10J3Q5JRS4 329 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 LELP1Q5T871 98 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 SUN5Q8TC36 379 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 PRADC1Q9BSG0 188 aa11.61□□□□□ -0.55
HLA-A-201ENST00000376802 PGPEP1LA6NFU8 196 aa11.6□□□□□ -0.55
HLA-A-201ENST00000376802 IGHV3-30P01768 117 aa11.6□□□□□ -0.55
HLA-A-201ENST00000376802 IGHV3-33P01772 117 aa11.6□□□□□ -0.55
HLA-A-201ENST00000376802 TCRAP04437 139 aa11.6□□□□□ -0.55
HLA-A-201ENST00000376802 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
HLA-A-201ENST00000376802 IGHV3-30-5P0DP03 117 aa11.6□□□□□ -0.55
HLA-A-201ENST00000376802 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
HLA-A-201ENST00000376802 Q6ZSN1 163 aa11.6□□□□□ -0.55
HLA-A-201ENST00000376802 TMEM75Q8N9X5 138 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms