RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 ZNF469Q96JG9 3925 aaPredicted RBP10.66□□□□□ -0.7
HMGCL-203ENST00000374490 TRAV40A0A0B4J280 105 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 PRSS47A8MTI9 375 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 SNAI2O43623 268 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 KRTAP1-3Q8IUG1 177 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 LRRC75A-AS1Q8N1F1 130 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 DEFB125Q8N687 156 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 Q8N8P6 123 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
HMGCL-203ENST00000374490 MCRIP2Q9BUT9 160 aaKnown RBP10.66□□□□□ -0.7
HMGCL-203ENST00000374490 ACANP16112 2415 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 A6NDX4 124 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 SIVA1O15304 175 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 ZNF207O43670 478 aaKnown RBP10.65□□□□□ -0.7
HMGCL-203ENST00000374490 CD5LO43866 347 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 MSMBP08118 114 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 SEC11AP67812 179 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 OR9G4Q8NGQ1 327 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.7
HMGCL-203ENST00000374490 IGHV3OR16-13A0A075B7E8 117 aa10.64□□□□□ -0.71
HMGCL-203ENST00000374490 IGHV3-74A0A0B4J1X5 117 aa10.64□□□□□ -0.71
HMGCL-203ENST00000374490 B4DSR2 109 aa10.64□□□□□ -0.71
HMGCL-203ENST00000374490 IGHG2P01859 326 aa10.64□□□□□ -0.71
HMGCL-203ENST00000374490 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
HMGCL-203ENST00000374490 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 IGHV7-4-1A0A0J9YVY3 117 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 ATP5LO75964 103 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 LY6G6DO95868 133 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 MRAP2Q96G30 205 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 SMPXQ9UHP9 88 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 ZNF580Q9UK33 172 aa10.63□□□□□ -0.71
HMGCL-203ENST00000374490 IGHV3OR16-10A0A075B7F0 116 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 A0A0G2JLM5 398 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 FGF6P10767 208 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 LEPP41159 167 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 ANKRD39Q53RE8 183 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 C2orf91Q6ZV80 131 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 BOD1L2Q8IYS8 172 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 Q96MF0 132 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
HMGCL-203ENST00000374490 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 TAX1BP3O14907 124 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 SMAD7O15105 426 aaKnown RBP10.62□□□□□ -0.71
HMGCL-203ENST00000374490 PPIFP30405 207 aaKnown RBP10.62□□□□□ -0.71
HMGCL-203ENST00000374490 SPANXN1Q5VSR9 72 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 BRD3OSQ6XYD6 125 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
HMGCL-203ENST00000374490 SOCS3O14543 225 aa10.61□□□□□ -0.71
HMGCL-203ENST00000374490 GATA3P23771 443 aa10.61□□□□□ -0.71
HMGCL-203ENST00000374490 TMEM97Q5BJF2 176 aa10.61□□□□□ -0.71
HMGCL-203ENST00000374490 TP73-AS1Q9UF72 201 aa10.61□□□□□ -0.71
HMGCL-203ENST00000374490 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
HMGCL-203ENST00000374490 H3BUX3 64 aa10.6□□□□□ -0.71
HMGCL-203ENST00000374490 CCL25O15444 150 aa10.6□□□□□ -0.71
HMGCL-203ENST00000374490 HSD52Q0P140 79 aa10.6□□□□□ -0.71
HMGCL-203ENST00000374490 FOXE3Q13461 319 aa10.6□□□□□ -0.71
HMGCL-203ENST00000374490 VAMP3Q15836 100 aa10.6□□□□□ -0.71
HMGCL-203ENST00000374490 LINC01356Q8N9X3 169 aa10.6□□□□□ -0.71
HMGCL-203ENST00000374490 FLNAP21333 2647 aaKnown RBP10.59□□□□□ -0.71
HMGCL-203ENST00000374490 A6NDN8 102 aa10.59□□□□□ -0.71
HMGCL-203ENST00000374490 EVI2AP22794 236 aa10.59□□□□□ -0.71
HMGCL-203ENST00000374490 PRIMA1Q86XR5 153 aa10.59□□□□□ -0.71
HMGCL-203ENST00000374490 C20orf173Q96LM9 149 aa10.59□□□□□ -0.71
HMGCL-203ENST00000374490 ZMAT4Q9H898 229 aa10.59□□□□□ -0.71
HMGCL-203ENST00000374490 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
HMGCL-203ENST00000374490 UFC1Q9Y3C8 167 aa10.59□□□□□ -0.71
HMGCL-203ENST00000374490 IGHV4-38-2P0DP08 117 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 PF4V1P10720 104 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 ASIPP42127 132 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 LAGE3Q14657 143 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 UNQ9165/PRO28630Q6UXU0 137 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 NRACQ8N912 160 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 TMEM158Q8WZ71 300 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 PEF1Q9UBV8 284 aaKnown RBP10.58□□□□□ -0.72
HMGCL-203ENST00000374490 H3BVH4 76 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 K7EMI3 77 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 K7EMT4 169 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 IGLV1-40P01703 118 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 FXYD7P58549 80 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 ODF1Q14990 250 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 LY6EQ16553 131 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 GPHB5Q86YW7 130 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 APRG1Q8IVJ8 170 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
HMGCL-203ENST00000374490 A0A096LNT2 108 aa10.57□□□□□ -0.72
HMGCL-203ENST00000374490 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
HMGCL-203ENST00000374490 TRBV12-3P01733 135 aa10.57□□□□□ -0.72
HMGCL-203ENST00000374490 PRSS1P07477 247 aa10.57□□□□□ -0.72
HMGCL-203ENST00000374490 OR4C5Q8NGB2 326 aa10.57□□□□□ -0.72
HMGCL-203ENST00000374490 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1070.6 ms