RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 OR2K2Q8NGT1 345 aa13.72□□□□□ -0.21
TRAF3IP1-201ENST00000373327 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
TRAF3IP1-201ENST00000373327 PPBPP02775 128 aa13.72□□□□□ -0.21
TRAF3IP1-201ENST00000373327 ATP5LO75964 103 aa13.71□□□□□ -0.21
TRAF3IP1-201ENST00000373327 IGKCP01834 107 aa13.71□□□□□ -0.21
TRAF3IP1-201ENST00000373327 ZNF747Q9BV97 191 aa13.71□□□□□ -0.21
TRAF3IP1-201ENST00000373327 DPM2O94777 84 aa13.71□□□□□ -0.21
TRAF3IP1-201ENST00000373327 CRIP1P50238 77 aa13.71□□□□□ -0.22
TRAF3IP1-201ENST00000373327 KLK9Q9UKQ9 250 aa13.71□□□□□ -0.22
TRAF3IP1-201ENST00000373327 B4DSR2 109 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 GNRH2O43555 120 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 BUB3O43684 328 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 HIST2H2BDQ6DRA6 164 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 IGKV3D-20A0A0C4DH25 116 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 PSMB2P49721 201 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 PCP2Q8IVA1 136 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 KLF5Q13887 457 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 LAGE3Q14657 143 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 ANXA2RQ3ZCQ2 193 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 C9orf139Q6ZV77 190 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 SPCS1Q9Y6A9 102 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 IGKV3OR2-268A0A0C4DH90 116 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 KNCNA6PVL3 124 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 SRSF1Q07955 248 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 SPINK13Q1W4C9 94 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 ANKRD39Q53RE8 183 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 ORAOV1Q8WV07 137 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 COX11Q9Y6N1 276 aa13.7□□□□□ -0.22
TRAF3IP1-201ENST00000373327 WI2-2373I1.2A0A1W2PRP0 233 aa13.69□□□□□ -0.22
TRAF3IP1-201ENST00000373327 C2orf70A6NJV1 201 aa13.69□□□□□ -0.22
TRAF3IP1-201ENST00000373327 MTURNQ8N3F0 131 aa13.69□□□□□ -0.22
TRAF3IP1-201ENST00000373327 SMIM13P0DJ93 91 aa13.69□□□□□ -0.22
TRAF3IP1-201ENST00000373327 HERVK_113P61574 105 aa13.69□□□□□ -0.22
TRAF3IP1-201ENST00000373327 A0A1B0GXF2 115 aa13.68□□□□□ -0.22
TRAF3IP1-201ENST00000373327 PRSS22Q9GZN4 317 aa13.68□□□□□ -0.22
TRAF3IP1-201ENST00000373327 TMEM8BA6NDV4 472 aa13.68□□□□□ -0.22
TRAF3IP1-201ENST00000373327 IGF1P05019 195 aa13.68□□□□□ -0.22
TRAF3IP1-201ENST00000373327 MRPS16Q9Y3D3 137 aaKnown RBP13.68□□□□□ -0.22
TRAF3IP1-201ENST00000373327 LY6G5BQ8NDX9 201 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 SIRPDQ9H106 197 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 K7ERU9 68 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 TNFRSF13BO14836 293 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 CSTL1Q9H114 145 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 LY6LH3BQJ8 138 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 DEFB136Q30KP8 78 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 MS4A6AQ9H2W1 248 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 CYSLTR1Q9Y271 337 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 MYCNOSP40205 109 aa13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 DAZ1Q9NQZ3 744 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP1-201ENST00000373327 LMO4P61968 165 aa13.66□□□□□ -0.22
TRAF3IP1-201ENST00000373327 Q6ZQT7 251 aa13.66□□□□□ -0.22
TRAF3IP1-201ENST00000373327 SYT8Q8NBV8 401 aa13.66□□□□□ -0.22
TRAF3IP1-201ENST00000373327 OVOL1O14753 267 aa13.66□□□□□ -0.22
TRAF3IP1-201ENST00000373327 ESDP10768 282 aa13.66□□□□□ -0.22
TRAF3IP1-201ENST00000373327 FBXL19-AS1Q494R0 122 aa13.66□□□□□ -0.22
TRAF3IP1-201ENST00000373327 UBE2V1Q13404 147 aa13.65□□□□□ -0.22
TRAF3IP1-201ENST00000373327 KIR3DS1Q14943 382 aa13.65□□□□□ -0.22
TRAF3IP1-201ENST00000373327 MRPL35Q9NZE8 188 aaKnown RBP13.65□□□□□ -0.22
TRAF3IP1-201ENST00000373327 IGLV2-11P01706 119 aa13.65□□□□□ -0.22
TRAF3IP1-201ENST00000373327 SPATA12Q7Z6I5 190 aa13.65□□□□□ -0.22
TRAF3IP1-201ENST00000373327 CCDC140Q96MF4 163 aa13.65□□□□□ -0.22
TRAF3IP1-201ENST00000373327 CHTOPQ9Y3Y2 248 aaKnown RBP13.65□□□□□ -0.22
TRAF3IP1-201ENST00000373327 C1orf122Q6ZSJ8 110 aa13.64□□□□□ -0.23
TRAF3IP1-201ENST00000373327 C5orf56Q8N8D9 126 aa13.64□□□□□ -0.23
TRAF3IP1-201ENST00000373327 ODF3BA8MYP8 253 aa13.64□□□□□ -0.23
TRAF3IP1-201ENST00000373327 DEFB112Q30KQ8 113 aa13.64□□□□□ -0.23
TRAF3IP1-201ENST00000373327 GAS8-AS1O95177 125 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 RPL39LQ96EH5 51 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 MEGF9Q9H1U4 602 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 RIPPLY3P57055 190 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 LINC01587Q99440 93 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 A0A0U1RRA0 63 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 FAM223BA6NKX1 122 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 K7ERJ3 54 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 MRGPRG-AS1Q2M3A8 158 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 FAM223AQ8IWN6 122 aa13.63□□□□□ -0.23
TRAF3IP1-201ENST00000373327 DPH3P1Q9H4G8 78 aa13.62□□□□□ -0.23
TRAF3IP1-201ENST00000373327 BVES-AS1Q5T3Y7 98 aa13.62□□□□□ -0.23
TRAF3IP1-201ENST00000373327 ZNF418Q8TF45 676 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP1-201ENST00000373327 ZNF815PA8K554 130 aa13.62□□□□□ -0.23
TRAF3IP1-201ENST00000373327 AJUBAQ96IF1 538 aa13.61□□□□□ -0.23
TRAF3IP1-201ENST00000373327 MRPL16Q9NX20 251 aaKnown RBP13.61□□□□□ -0.23
TRAF3IP1-201ENST00000373327 CCL25O15444 150 aa13.61□□□□□ -0.23
TRAF3IP1-201ENST00000373327 SMAD5-AS1Q9Y6J3 95 aa13.61□□□□□ -0.23
TRAF3IP1-201ENST00000373327 AGRNO00468 2067 aa13.61□□□□□ -0.23
TRAF3IP1-201ENST00000373327 LGALS3P17931 250 aaKnown RBP13.61□□□□□ -0.23
TRAF3IP1-201ENST00000373327 UBE2E2Q96LR5 201 aa13.61□□□□□ -0.23
TRAF3IP1-201ENST00000373327 COX8AP10176 69 aa13.6□□□□□ -0.23
TRAF3IP1-201ENST00000373327 DEFB131AP59861 70 aa13.6□□□□□ -0.23
TRAF3IP1-201ENST00000373327 HSD52Q0P140 79 aa13.6□□□□□ -0.23
TRAF3IP1-201ENST00000373327 C10orf99Q6UWK7 81 aa13.6□□□□□ -0.23
TRAF3IP1-201ENST00000373327 USMG5Q96IX5 58 aa13.6□□□□□ -0.23
TRAF3IP1-201ENST00000373327 COTL1Q14019 142 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 ZNF876PQ49A33 203 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 Q6ZS46 218 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 J3QR89 54 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 IGHV3-53P01767 116 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms