RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 C11orf21Q9P2W6 132 aa18.81■□□□□ 0.6
CTSA-203ENST00000372459 IGLC3P0DOY3 106 aa18.8■□□□□ 0.6
CTSA-203ENST00000372459 BTF3P20290 206 aaKnown RBP18.8■□□□□ 0.6
CTSA-203ENST00000372459 OR1N2Q8NGR9 330 aa18.8■□□□□ 0.6
CTSA-203ENST00000372459 URB1-AS1Q96HZ7 61 aa18.8■□□□□ 0.6
CTSA-203ENST00000372459 TFPI2P48307 235 aa18.79■□□□□ 0.6
CTSA-203ENST00000372459 SNRPD3P62318 126 aaKnown RBP18.79■□□□□ 0.6
CTSA-203ENST00000372459 PRR9Q5T870 116 aa18.79■□□□□ 0.6
CTSA-203ENST00000372459 DMRTA1Q5VZB9 504 aa18.79■□□□□ 0.6
CTSA-203ENST00000372459 KLHL30-AS1Q8NEE0 82 aa18.79■□□□□ 0.6
CTSA-203ENST00000372459 EBLN2Q6P2I7 272 aa18.79■□□□□ 0.6
CTSA-203ENST00000372459 WFDC12Q8WWY7 111 aa18.79■□□□□ 0.6
CTSA-203ENST00000372459 CNFNQ9BYD5 112 aa18.79■□□□□ 0.6
CTSA-203ENST00000372459 MUC21A0A0G2JKD1 596 aa18.78■□□□□ 0.6
CTSA-203ENST00000372459 MUC21A0A140T8X8 626 aa18.78■□□□□ 0.6
CTSA-203ENST00000372459 C20orf202A1L168 122 aa18.78■□□□□ 0.6
CTSA-203ENST00000372459 K7EQG2 157 aa18.78■□□□□ 0.6
CTSA-203ENST00000372459 TWIST1Q15672 202 aa18.78■□□□□ 0.6
CTSA-203ENST00000372459 MUC21Q5SSG8 566 aa18.78■□□□□ 0.6
CTSA-203ENST00000372459 ZNF418Q8TF45 676 aaPredicted RBP18.78■□□□□ 0.6
CTSA-203ENST00000372459 PEMTQ9UBM1 199 aa18.78■□□□□ 0.6
CTSA-203ENST00000372459 TRAV21A0A0B4J279 112 aa18.77■□□□□ 0.6
CTSA-203ENST00000372459 ANK3Q12955 4377 aaKnown RBP18.77■□□□□ 0.6
CTSA-203ENST00000372459 J3KRW8 73 aa18.77■□□□□ 0.59
CTSA-203ENST00000372459 ZNF688P0C7X2 276 aa18.76■□□□□ 0.59
CTSA-203ENST00000372459 ACANP16112 2415 aa18.76■□□□□ 0.59
CTSA-203ENST00000372459 FASNP49327 2511 aaKnown RBP18.76■□□□□ 0.59
CTSA-203ENST00000372459 PSMG4Q5JS54 123 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 APRG1Q8IVJ8 170 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 C16orf95Q9H693 158 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 MYO9AB2RTY4 2548 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 FAM104BQ5XKR9 115 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 ADAMTSL5Q6ZMM2 481 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 Q6ZQT7 251 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 OR9G4Q8NGQ1 327 aa18.75■□□□□ 0.59
CTSA-203ENST00000372459 TRAV9-2A0A087WT02 112 aa18.74■□□□□ 0.59
CTSA-203ENST00000372459 DUX3Q96PT4 197 aa18.74■□□□□ 0.59
CTSA-203ENST00000372459 SMR3AQ99954 134 aa18.74■□□□□ 0.59
CTSA-203ENST00000372459 HILS1P60008 231 aa18.73■□□□□ 0.59
CTSA-203ENST00000372459 TMEM70Q9BUB7 260 aa18.73■□□□□ 0.59
CTSA-203ENST00000372459 CRXO43186 299 aaPredicted RBP18.73■□□□□ 0.59
CTSA-203ENST00000372459 RNASE4P34096 147 aaKnown RBP18.72■□□□□ 0.59
CTSA-203ENST00000372459 HNRNPA3P51991 378 aaKnown RBP18.72■□□□□ 0.59
CTSA-203ENST00000372459 Q6ZN92 141 aa18.72■□□□□ 0.59
CTSA-203ENST00000372459 AMN1Q8IY45 258 aa18.72■□□□□ 0.59
CTSA-203ENST00000372459 IGHV1-24A0A0C4DH33 117 aa18.72■□□□□ 0.59
CTSA-203ENST00000372459 COL5A1-AS1Q5SY13 56 aa18.72■□□□□ 0.59
CTSA-203ENST00000372459 LINC01006Q8NI28 216 aa18.72■□□□□ 0.59
CTSA-203ENST00000372459 DLX4Q92988 240 aaPredicted RBP18.72■□□□□ 0.59
CTSA-203ENST00000372459 TMEM191AQ9H0A3 160 aa18.72■□□□□ 0.59
CTSA-203ENST00000372459 ATOH7Q8N100 152 aa18.71■□□□□ 0.59
CTSA-203ENST00000372459 OR5AL1P0C617 328 aa18.7■□□□□ 0.58
CTSA-203ENST00000372459 LINC00614P0C842 121 aa18.7■□□□□ 0.58
CTSA-203ENST00000372459 ZNF25P17030 456 aaPredicted RBP18.7■□□□□ 0.58
CTSA-203ENST00000372459 MSRB1Q9NZV6 116 aa18.7■□□□□ 0.58
CTSA-203ENST00000372459 HECTD1Q9ULT8 2610 aa18.7■□□□□ 0.58
CTSA-203ENST00000372459 A0A0J9YX75 114 aa18.7■□□□□ 0.58
CTSA-203ENST00000372459 KLLNB2CW77 178 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 SNAI2O43623 268 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 LY6G6DO95868 133 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 CD28P10747 220 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 G0S2P27469 103 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 GAGE1Q13065 139 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 BATFQ16520 125 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 HIST2H2BDQ6DRA6 164 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 ODF3Q96PU9 254 aa18.69■□□□□ 0.58
CTSA-203ENST00000372459 D6R8Y8 96 aa18.68■□□□□ 0.58
CTSA-203ENST00000372459 C11orf44Q8N8P7 122 aa18.68■□□□□ 0.58
CTSA-203ENST00000372459 U3KQK5 164 aa18.68■□□□□ 0.58
CTSA-203ENST00000372459 CSN3P07498 182 aa18.68■□□□□ 0.58
CTSA-203ENST00000372459 MRPL51Q4U2R6 128 aaKnown RBP18.68■□□□□ 0.58
CTSA-203ENST00000372459 ORMDL3Q8N138 153 aa18.68■□□□□ 0.58
CTSA-203ENST00000372459 MRPS16Q9Y3D3 137 aaKnown RBP18.68■□□□□ 0.58
CTSA-203ENST00000372459 CUBNO60494 3623 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 LEPROTL1O95214 131 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 LEPP41159 167 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 CACNG7P62955 275 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 KIR3DS1Q14943 382 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 MAJINQ3KP22 176 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 SPATA12Q7Z6I5 190 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 OR10AG1Q8NH19 301 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 RAX2Q96IS3 184 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 JMJD8Q96S16 334 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 LAMTOR2Q9Y2Q5 125 aa18.67■□□□□ 0.58
CTSA-203ENST00000372459 DLEU1O43261 78 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 TMEM208Q9BTX3 173 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 TRAV2A0A0B4J234 112 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 SYS1-DBNDD2H3BUS1 97 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 TSPOP30536 169 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 ZNF124Q15973 351 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 ANXA2RQ3ZCQ2 193 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 DYNLRB2Q8TF09 96 aa18.66■□□□□ 0.58
CTSA-203ENST00000372459 TSSC4Q9Y5U2 329 aaPredicted RBP18.66■□□□□ 0.58
CTSA-203ENST00000372459 IGHV4-4A0A075B6R2 117 aa18.65■□□□□ 0.58
CTSA-203ENST00000372459 A0A1W2PRX2 142 aa18.65■□□□□ 0.58
CTSA-203ENST00000372459 H3BVH4 76 aa18.65■□□□□ 0.58
CTSA-203ENST00000372459 DUSP14O95147 198 aaKnown RBP18.65■□□□□ 0.58
CTSA-203ENST00000372459 FOXI2Q6ZQN5 318 aa18.65■□□□□ 0.58
CTSA-203ENST00000372459 PRELID3AQ96N28 172 aa18.65■□□□□ 0.58
CTSA-203ENST00000372459 IGLL1P15814 213 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms