RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 HMGB3O15347 200 aaKnown RBP13□□□□□ -0.33
TMEM53-201ENST00000372235 TCRAP04437 139 aa13□□□□□ -0.33
TMEM53-201ENST00000372235 OR4C5Q8NGB2 326 aa13□□□□□ -0.33
TMEM53-201ENST00000372235 MUC4Q99102 2169 aa13□□□□□ -0.33
TMEM53-201ENST00000372235 SAPCD1Q5SSQ6 148 aa12.99□□□□□ -0.33
TMEM53-201ENST00000372235 LYPD5Q6UWN5 251 aa12.99□□□□□ -0.33
TMEM53-201ENST00000372235 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
TMEM53-201ENST00000372235 IGHV3-16A0A0C4DH30 117 aa12.98□□□□□ -0.33
TMEM53-201ENST00000372235 NXPH4O95158 308 aa12.98□□□□□ -0.33
TMEM53-201ENST00000372235 ZNF575Q86XF7 245 aa12.98□□□□□ -0.33
TMEM53-201ENST00000372235 NKX6-2Q9C056 277 aaPredicted RBP12.98□□□□□ -0.33
TMEM53-201ENST00000372235 KIAA1109Q2LD37 5005 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 TRAV8-1A0A0A6YYK1 113 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 A0A1W2PRE2 83 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 K7EQD1 137 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
TMEM53-201ENST00000372235 CDK2AP2O75956 126 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 SUMO1P63165 101 aaKnown RBP12.97□□□□□ -0.33
TMEM53-201ENST00000372235 GNG5P63218 68 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 SMUG1Q53HV7 270 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 CYB561D1Q8N8Q1 229 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 TMEM75Q8N9X5 138 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 ZNF479Q96JC4 524 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 KRTAP1-5Q9BYS1 174 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 EPDR1Q9UM22 224 aa12.97□□□□□ -0.33
TMEM53-201ENST00000372235 FXYD6-FXYD2A0A087WZ82 144 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 F6UZH7 168 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 EREGO14944 169 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 GNRH2O43555 120 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 TYMSP04818 313 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 PFN1P07737 140 aaKnown RBP12.96□□□□□ -0.33
TMEM53-201ENST00000372235 GYPEP15421 78 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 PPT1P50897 306 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.33
TMEM53-201ENST00000372235 PSG8Q9UQ74 426 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 LY96Q9Y6Y9 160 aa12.96□□□□□ -0.33
TMEM53-201ENST00000372235 SFTA3P0C7M3 94 aa12.95□□□□□ -0.34
TMEM53-201ENST00000372235 RGS21Q2M5E4 152 aa12.95□□□□□ -0.34
TMEM53-201ENST00000372235 OR2T35Q8NGX2 323 aa12.95□□□□□ -0.34
TMEM53-201ENST00000372235 TVP23CQ96ET8 276 aa12.95□□□□□ -0.34
TMEM53-201ENST00000372235 PKHD1P08F94 4074 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 CTXND1A0A1B0GTU2 59 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 GCGP01275 180 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 EVI2AP22794 236 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 LINC00315P59091 139 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 AKR1C8PQ5T2L2 129 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 SPATA12Q7Z6I5 190 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 PTH2Q96A98 100 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 SH3BGRL3Q9H299 93 aa12.94□□□□□ -0.34
TMEM53-201ENST00000372235 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
TMEM53-201ENST00000372235 RPL7L1Q6DKI1 246 aaKnown RBP12.93□□□□□ -0.34
TMEM53-201ENST00000372235 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
TMEM53-201ENST00000372235 RNF222A6NCQ9 220 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 GGTLC3B5MD39 225 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 TIRAPP58753 221 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 Q5BKY6 102 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 PRNTQ86SH4 94 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 SGK494Q96LW2 274 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 PRADC1Q9BSG0 188 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 PKD1P98161 4303 aa12.92□□□□□ -0.34
TMEM53-201ENST00000372235 IFNA7P01567 189 aa12.91□□□□□ -0.34
TMEM53-201ENST00000372235 HIST1H2BAQ96A08 127 aa12.91□□□□□ -0.34
TMEM53-201ENST00000372235 IGLV2-11P01706 119 aa12.9□□□□□ -0.34
TMEM53-201ENST00000372235 GATA1P15976 413 aaPredicted RBP12.9□□□□□ -0.34
TMEM53-201ENST00000372235 ERVFC1-1P60608 527 aa12.9□□□□□ -0.34
TMEM53-201ENST00000372235 PIK3CD-AS1Q5SR53 167 aa12.9□□□□□ -0.34
TMEM53-201ENST00000372235 STOML3Q8TAV4 291 aa12.9□□□□□ -0.34
TMEM53-201ENST00000372235 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
TMEM53-201ENST00000372235 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.34
TMEM53-201ENST00000372235 TRBV6-4A0A1B0GX49 114 aa12.89□□□□□ -0.35
TMEM53-201ENST00000372235 FABP5P3A8MUU1 101 aa12.89□□□□□ -0.35
TMEM53-201ENST00000372235 DNAH10OSP0CZ25 163 aa12.89□□□□□ -0.35
TMEM53-201ENST00000372235 RHOHQ15669 191 aa12.89□□□□□ -0.35
TMEM53-201ENST00000372235 NHLRC2Q8NBF2 726 aa12.89□□□□□ -0.35
TMEM53-201ENST00000372235 KRTAP17-1Q9BYP8 105 aa12.89□□□□□ -0.35
TMEM53-201ENST00000372235 DNAH11Q96DT5 4516 aa12.89□□□□□ -0.35
TMEM53-201ENST00000372235 RS1O15537 224 aa12.88□□□□□ -0.35
TMEM53-201ENST00000372235 MGST1P10620 155 aaKnown RBP12.88□□□□□ -0.35
TMEM53-201ENST00000372235 S100A4P26447 101 aaKnown RBP12.88□□□□□ -0.35
TMEM53-201ENST00000372235 ZNF80P51504 273 aaPredicted RBP12.88□□□□□ -0.35
TMEM53-201ENST00000372235 CDPF1Q6NVV7 123 aa12.88□□□□□ -0.35
TMEM53-201ENST00000372235 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
TMEM53-201ENST00000372235 TRAV8-6A0A0B4J262 113 aa12.87□□□□□ -0.35
TMEM53-201ENST00000372235 CFAP126Q5VTH2 177 aa12.87□□□□□ -0.35
TMEM53-201ENST00000372235 Q6ZRN7 208 aaPredicted RBP12.87□□□□□ -0.35
TMEM53-201ENST00000372235 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
TMEM53-201ENST00000372235 ZFP30Q9Y2G7 519 aa12.87□□□□□ -0.35
TMEM53-201ENST00000372235 A8MWV9 139 aa12.86□□□□□ -0.35
TMEM53-201ENST00000372235 PEX7O00628 323 aa12.86□□□□□ -0.35
TMEM53-201ENST00000372235 ARPC5O15511 151 aa12.86□□□□□ -0.35
TMEM53-201ENST00000372235 ARL2-SNX15V9GYD0 113 aa12.86□□□□□ -0.35
TMEM53-201ENST00000372235 DYNC1H1Q14204 4646 aaKnown RBP12.85□□□□□ -0.35
TMEM53-201ENST00000372235 FAM74A7A6NL05 159 aa12.85□□□□□ -0.35
TMEM53-201ENST00000372235 ASIPP42127 132 aa12.85□□□□□ -0.35
TMEM53-201ENST00000372235 FHITP49789 147 aa12.85□□□□□ -0.35
TMEM53-201ENST00000372235 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
TMEM53-201ENST00000372235 ZFP2Q6ZN57 461 aa12.85□□□□□ -0.35
TMEM53-201ENST00000372235 SLC25A29Q8N8R3 303 aa12.85□□□□□ -0.35
TMEM53-201ENST00000372235 FMC1Q96HJ9 113 aa12.85□□□□□ -0.35
TMEM53-201ENST00000372235 IGHV3-38A0A0C4DH36 116 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms