RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 TET1Q8NFU7 2136 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 NDUFA1O15239 70 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 TRIOBPQ9H2D6 2365 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 C15orf53Q8NAA6 179 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 CTSZQ9UBR2 303 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 NPBQ8NG41 125 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 SMAD5-AS1Q9Y6J3 95 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 POU2AF1Q16633 256 aa12.3□□□□□ -0.44
NUCKS1-201ENST00000367142 SIPA1L1O43166 1804 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 BAALC-AS2P0C853 105 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 IGLC2P0DOY2 106 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 IGLC3P0DOY3 106 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 ZNF726P1Q15940 193 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 IGHV4-28A0A0C4DH34 117 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 K7EP34 96 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 C10orf105Q8TEF2 133 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 AMTNQ6UX39 209 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 AJUBAQ96IF1 538 aa12.29□□□□□ -0.44
NUCKS1-201ENST00000367142 GREB1Q4ZG55 1949 aa12.28□□□□□ -0.44
NUCKS1-201ENST00000367142 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
NUCKS1-201ENST00000367142 IGLC7A0M8Q6 106 aa12.28□□□□□ -0.44
NUCKS1-201ENST00000367142 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
NUCKS1-201ENST00000367142 SIVA1O15304 175 aa12.27□□□□□ -0.44
NUCKS1-201ENST00000367142 MP68P56378 58 aa12.27□□□□□ -0.44
NUCKS1-201ENST00000367142 COX7B2Q8TF08 81 aa12.27□□□□□ -0.44
NUCKS1-201ENST00000367142 CRYBA4P53673 196 aa12.27□□□□□ -0.44
NUCKS1-201ENST00000367142 IGLL5B9A064 214 aa12.27□□□□□ -0.45
NUCKS1-201ENST00000367142 CFC1BP0CG36 223 aa12.27□□□□□ -0.45
NUCKS1-201ENST00000367142 CFC1P0CG37 223 aa12.27□□□□□ -0.45
NUCKS1-201ENST00000367142 Q8NFD4 153 aa12.27□□□□□ -0.45
NUCKS1-201ENST00000367142 ARTNQ5T4W7 220 aa12.27□□□□□ -0.45
NUCKS1-201ENST00000367142 C11orf52Q96A22 123 aa12.27□□□□□ -0.45
NUCKS1-201ENST00000367142 ADCYAP1P18509 176 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 C5orf47Q569G3 176 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 VSIG2Q96IQ7 327 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 IGHG2P01859 326 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 RBM3P98179 157 aaKnown RBP12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 A0A087WW49 117 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 ESM1Q9NQ30 184 aa12.26□□□□□ -0.45
NUCKS1-201ENST00000367142 INTS1Q8N201 2190 aaKnown RBP12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 CITED1Q99966 193 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 LTBP1Q14766 1721 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 A0A1W2PPM0 123 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 DKK2Q9UBU2 259 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 IGHV7-81A0A0B4J1V7 117 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 GBF1Q92538 1859 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 WIPF3A6NGB9 483 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 H0YGX0 51 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 IL15RAQ13261 267 aa12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
NUCKS1-201ENST00000367142 IGF2-ASQ6U949 168 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 SND1-IT1Q9HBX3 110 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 C9JQL5 133 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 PRR20EP86478 221 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 PRR20CP86479 221 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 PRR20DP86480 221 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 PRR20BP86481 221 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 PRR20AP86496 221 aa12.24□□□□□ -0.45
NUCKS1-201ENST00000367142 ZFP2Q6ZN57 461 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 C1orf147Q96MC9 270 aaPredicted RBP12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 K7ERJ3 54 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 DAZAP2Q15038 168 aaPredicted RBP12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 ETDBQ3ZM63 59 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 C16orf54Q6UWD8 224 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 CACNA1IQ9P0X4 2223 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 THSD7BQ9C0I4 1608 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 CXCL5P42830 114 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 BLCAPP62952 87 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 DEFB135Q30KP9 77 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 NCR3O14931 201 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 B9D2Q9BPU9 175 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 C14orf177Q52M58 125 aa12.23□□□□□ -0.45
NUCKS1-201ENST00000367142 A0A1B0GX51 115 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 RNF138Q8WVD3 245 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 INSL3P51460 131 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 C12orf74Q32Q52 190 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 WFDC9Q8NEX5 89 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 NTN5Q8WTR8 489 aaPredicted RBP12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 SPANXCQ9NY87 97 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 IGLL1P15814 213 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 NREPQ16612 68 aa12.22□□□□□ -0.45
NUCKS1-201ENST00000367142 TMEM89A2RUT3 159 aa12.21□□□□□ -0.45
NUCKS1-201ENST00000367142 C2orf70A6NJV1 201 aa12.21□□□□□ -0.45
NUCKS1-201ENST00000367142 IGFL2Q6UWQ7 119 aa12.21□□□□□ -0.45
NUCKS1-201ENST00000367142 C5orf56Q8N8D9 126 aa12.21□□□□□ -0.45
NUCKS1-201ENST00000367142 SBF1O95248 1867 aa12.21□□□□□ -0.45
NUCKS1-201ENST00000367142 COL4A6Q14031 1691 aa12.21□□□□□ -0.45
NUCKS1-201ENST00000367142 ACYP1P07311 99 aa12.21□□□□□ -0.45
NUCKS1-201ENST00000367142 ARHGEF17Q96PE2 2063 aaPredicted RBP12.2□□□□□ -0.46
NUCKS1-201ENST00000367142 ASPHD1Q5U4P2 390 aa12.2□□□□□ -0.46
NUCKS1-201ENST00000367142 IGLV11-55A0A075B6I3 123 aa12.2□□□□□ -0.46
NUCKS1-201ENST00000367142 ADORA2A-AS1P86434 159 aa12.2□□□□□ -0.46
NUCKS1-201ENST00000367142 RS1O15537 224 aa12.2□□□□□ -0.46
NUCKS1-201ENST00000367142 SEC61GP60059 68 aa12.2□□□□□ -0.46
NUCKS1-201ENST00000367142 NRGNQ92686 78 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms