RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 FAM107AO95990 144 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 IQCJQ1A5X6 159 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 C19orf12Q9NSK7 152 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 KDM5CP41229 1560 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 TNS1Q9HBL0 1735 aaKnown RBP0.05□□□□□ -2.4
RNU6-560P-201ENST00000364007 TTC28Q96AY4 2481 aa0.05□□□□□ -2.4
RNU6-560P-201ENST00000364007 ETV6P41212 452 aa0.05□□□□□ -2.4
RNU6-560P-201ENST00000364007 SRP9P49458 86 aaKnown RBP0.05□□□□□ -2.4
RNU6-560P-201ENST00000364007 SMIM7Q9BQ49 75 aa0.05□□□□□ -2.4
RNU6-560P-201ENST00000364007 KIF13AQ9H1H9 1805 aa0.04□□□□□ -2.4
RNU6-560P-201ENST00000364007 HBDP02042 147 aa0.04□□□□□ -2.4
RNU6-560P-201ENST00000364007 FABP1P07148 127 aa0.04□□□□□ -2.4
RNU6-560P-201ENST00000364007 OTOSQ8NHW6 89 aa0.04□□□□□ -2.4
RNU6-560P-201ENST00000364007 NAT14Q8WUY8 206 aa0.04□□□□□ -2.4
RNU6-560P-201ENST00000364007 DMAC1Q96GE9 116 aa0.04□□□□□ -2.4
RNU6-560P-201ENST00000364007 CPDO75976 1380 aa0.04□□□□□ -2.4
RNU6-560P-201ENST00000364007 F5P12259 2224 aa0.03□□□□□ -2.4
RNU6-560P-201ENST00000364007 A0A0G2JMM0 328 aa0.03□□□□□ -2.4
RNU6-560P-201ENST00000364007 RHOHQ15669 191 aa0.03□□□□□ -2.4
RNU6-560P-201ENST00000364007 SMPXQ9UHP9 88 aa0.03□□□□□ -2.4
RNU6-560P-201ENST00000364007 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.4
RNU6-560P-201ENST00000364007 PLXNA1Q9UIW2 1896 aa0.03□□□□□ -2.41
RNU6-560P-201ENST00000364007 OTOGQ6ZRI0 2925 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 CASZ1Q86V15 1759 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 A0A1B0GV72 72 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 CKS2P33552 79 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 RPL22P35268 128 aaKnown RBP0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 IDO2Q6ZQW0 420 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 OR5A2Q8NGI9 324 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 CCDC115Q96NT0 180 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 ZFYVE26Q68DK2 2539 aa0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 VIRMAQ69YN4 1812 aaKnown RBP0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 SAMD13Q5VXD3 122 aa0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 PTPRGP23470 1445 aa0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 HRNRQ86YZ3 2850 aaPredicted RBP0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 MYH13Q9UKX3 1938 aa0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 MYO7AQ13402 2215 aa0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 IGHV1-24A0A0C4DH33 117 aa0□□□□□ -2.41
RNU6-560P-201ENST00000364007 SSPOA2VEC9 5147 aa0□□□□□ -2.41
RNU6-560P-201ENST00000364007 ADCYAP1P18509 176 aa0□□□□□ -2.41
RNU6-560P-201ENST00000364007 BLMP54132 1417 aaPredicted RBP0□□□□□ -2.41
RNU6-560P-201ENST00000364007 KLKP1Q107X0 134 aa0□□□□□ -2.41
RNU6-560P-201ENST00000364007 ATG5Q9H1Y0 275 aa0□□□□□ -2.41
RNU6-560P-201ENST00000364007 PROK2Q9HC23 129 aa0□□□□□ -2.41
RNU6-560P-201ENST00000364007 TMEM14BQ9NUH8 114 aa0□□□□□ -2.41
RNU6-560P-201ENST00000364007 IFNA21P01568 189 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 SLC25A5P05141 298 aaKnown RBP-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 PCBD1P61457 104 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 LSM3P62310 102 aaKnown RBP-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 TMEM128Q5BJH2 165 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 UNQ5815/PRO19632Q6UWF5 114 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 OR9Q1Q8NGQ5 310 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 V9GYQ6 96 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 ABCA12Q86UK0 2595 aa-0.01□□□□□ -2.41
RNU6-560P-201ENST00000364007 JMJD1CQ15652 2540 aa-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 MED23Q9ULK4 1368 aa-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 A0A096LNT2 108 aa-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 UQCRQO14949 82 aa-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 CCKP06307 115 aa-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 TOMM20LQ6UXN7 152 aa-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 OR4S1Q8NGB4 309 aa-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 ZNF142P52746 1687 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-560P-201ENST00000364007 TFF1P04155 84 aa-0.03□□□□□ -2.41
RNU6-560P-201ENST00000364007 TCRAP04437 139 aa-0.03□□□□□ -2.41
RNU6-560P-201ENST00000364007 MPC1LP0DKB6 136 aa-0.03□□□□□ -2.41
RNU6-560P-201ENST00000364007 TFAMQ00059 246 aaKnown RBP-0.03□□□□□ -2.41
RNU6-560P-201ENST00000364007 CENPHQ9H3R5 247 aa-0.03□□□□□ -2.41
RNU6-560P-201ENST00000364007 AKAP11Q9UKA4 1901 aa-0.03□□□□□ -2.41
RNU6-560P-201ENST00000364007 TRAV17A0A0B4J275 112 aa-0.04□□□□□ -2.42
RNU6-560P-201ENST00000364007 S100A5P33763 92 aa-0.04□□□□□ -2.42
RNU6-560P-201ENST00000364007 POLR2JP52435 117 aaKnown RBP-0.04□□□□□ -2.42
RNU6-560P-201ENST00000364007 TMEM35BQ8NCS4 154 aa-0.04□□□□□ -2.42
RNU6-560P-201ENST00000364007 SPRR2GQ9BYE4 73 aa-0.04□□□□□ -2.42
RNU6-560P-201ENST00000364007 ARHGAP31Q2M1Z3 1444 aa-0.04□□□□□ -2.42
RNU6-560P-201ENST00000364007 ASXL3Q9C0F0 2248 aa-0.05□□□□□ -2.42
RNU6-560P-201ENST00000364007 IGSF10Q6WRI0 2623 aa-0.05□□□□□ -2.42
RNU6-560P-201ENST00000364007 TRBV10-1A0A0K0K1A3 114 aa-0.05□□□□□ -2.42
RNU6-560P-201ENST00000364007 S100GP29377 79 aa-0.05□□□□□ -2.42
RNU6-560P-201ENST00000364007 MACF1Q9UPN3 7388 aaKnown RBP-0.05□□□□□ -2.42
RNU6-560P-201ENST00000364007 OVOS2A0A0G2JMS6 1433 aa-0.05□□□□□ -2.42
RNU6-560P-201ENST00000364007 F8P00451 2351 aa-0.05□□□□□ -2.42
RNU6-560P-201ENST00000364007 DOCK11Q5JSL3 2073 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 PARP14Q460N5 1801 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 PNMA8CA0A1B0GUJ8 204 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 PGRMC1O00264 195 aaKnown RBP-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 PSPHP78330 225 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 Q5XG85 94 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 VMO1Q7Z5L0 202 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 DSCR8Q96T75 97 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 METTL1Q9UBP6 276 aaKnown RBP-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 CDK5RAP2Q96SN8 1893 aa-0.06□□□□□ -2.42
RNU6-560P-201ENST00000364007 POLQO75417 2590 aa-0.07□□□□□ -2.42
RNU6-560P-201ENST00000364007 HSD17B12Q53GQ0 312 aa-0.07□□□□□ -2.42
RNU6-560P-201ENST00000364007 NDUFAF1Q9Y375 327 aa-0.07□□□□□ -2.42
RNU6-560P-201ENST00000364007 ANK2Q01484 3957 aa-0.07□□□□□ -2.42
RNU6-560P-201ENST00000364007 PIEZO1Q92508 2521 aa-0.07□□□□□ -2.42
RNU6-560P-201ENST00000364007 AHCTF1Q8WYP5 2266 aa-0.07□□□□□ -2.42
RNU6-560P-201ENST00000364007 HIST1H1BP16401 226 aaKnown RBP-0.08□□□□□ -2.42
RNU6-560P-201ENST00000364007 SDC4P31431 198 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms