RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
TPM1-205ENST00000357980 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
TPM1-205ENST00000357980 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
TPM1-205ENST00000357980 GRIFINA4D1Z8 144 aa12.56□□□□□ -0.4
TPM1-205ENST00000357980 CRXO43186 299 aaPredicted RBP12.56□□□□□ -0.4
TPM1-205ENST00000357980 FER1L6-AS1Q8NA97 138 aa12.56□□□□□ -0.4
TPM1-205ENST00000357980 GNB1LQ9BYB4 327 aa12.56□□□□□ -0.4
TPM1-205ENST00000357980 NAGKQ9UJ70 344 aa12.56□□□□□ -0.4
TPM1-205ENST00000357980 A0A1B0GUT8 65 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 WIPF1O43516 503 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 ARMS2P0C7Q2 107 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
TPM1-205ENST00000357980 TPPP3Q9BW30 176 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 FXYD7P58549 80 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 HBBP68871 147 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 COX19Q49B96 90 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 WDR73Q6P4I2 378 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 STHQ8IWL8 128 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 ZFP82Q8N141 532 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
TPM1-205ENST00000357980 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
TPM1-205ENST00000357980 RAB5BP61020 215 aa12.54□□□□□ -0.4
TPM1-205ENST00000357980 FRZBQ92765 325 aa12.54□□□□□ -0.4
TPM1-205ENST00000357980 CNFNQ9BYD5 112 aa12.54□□□□□ -0.4
TPM1-205ENST00000357980 TRAPPC1Q9Y5R8 145 aa12.54□□□□□ -0.4
TPM1-205ENST00000357980 MT-ND6P03923 174 aa12.53□□□□□ -0.4
TPM1-205ENST00000357980 IGLL1P15814 213 aa12.53□□□□□ -0.4
TPM1-205ENST00000357980 FABP9Q0Z7S8 132 aa12.53□□□□□ -0.4
TPM1-205ENST00000357980 TDRG1Q3Y452 100 aa12.53□□□□□ -0.4
TPM1-205ENST00000357980 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
TPM1-205ENST00000357980 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
TPM1-205ENST00000357980 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
TPM1-205ENST00000357980 SSBP4Q9BWG4 385 aaPredicted RBP12.53□□□□□ -0.4
TPM1-205ENST00000357980 F2Z2F3 143 aa12.52□□□□□ -0.41
TPM1-205ENST00000357980 HLA-DQA1P01909 254 aa12.52□□□□□ -0.41
TPM1-205ENST00000357980 OR5AL1P0C617 328 aa12.52□□□□□ -0.41
TPM1-205ENST00000357980 CAMPP49913 170 aa12.52□□□□□ -0.41
TPM1-205ENST00000357980 DNLZQ5SXM8 178 aa12.52□□□□□ -0.41
TPM1-205ENST00000357980 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.41
TPM1-205ENST00000357980 SNAI2O43623 268 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BKO60814 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BJP06899 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BOP23527 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BBP33778 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BDP58876 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 RAB4BP61018 213 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BCP62807 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 RIGQ13278 110 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST2H2BEQ16778 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.51□□□□□ -0.41
TPM1-205ENST00000357980 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BHQ93079 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BNQ99877 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 HIST1H2BMQ99879 126 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 A0A1B0GW15 77 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 GNRH2O43555 120 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 GATD1Q8NB37 220 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 BORCS7Q96B45 105 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 KCNS1Q96KK3 526 aa12.51□□□□□ -0.41
TPM1-205ENST00000357980 MUC21A0A0G2JKD1 596 aa12.5□□□□□ -0.41
TPM1-205ENST00000357980 MUC21A0A140T8X8 626 aa12.5□□□□□ -0.41
TPM1-205ENST00000357980 H3BVH4 76 aa12.5□□□□□ -0.41
TPM1-205ENST00000357980 TRGC1P0CF51 173 aa12.5□□□□□ -0.41
TPM1-205ENST00000357980 ASIPP42127 132 aa12.5□□□□□ -0.41
TPM1-205ENST00000357980 GTSCR1Q86UQ5 136 aa12.5□□□□□ -0.41
TPM1-205ENST00000357980 PKD1L1Q8TDX9 2849 aa12.5□□□□□ -0.41
TPM1-205ENST00000357980 AMBPP02760 352 aa12.49□□□□□ -0.41
TPM1-205ENST00000357980 MED14OSP0DP75 135 aa12.49□□□□□ -0.41
TPM1-205ENST00000357980 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
TPM1-205ENST00000357980 SLAQ13239 276 aa12.49□□□□□ -0.41
TPM1-205ENST00000357980 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
TPM1-205ENST00000357980 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 NTF3P20783 257 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 OR10AG1Q8NH19 301 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 S100A8P05109 93 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
TPM1-205ENST00000357980 NUTF2P61970 127 aaKnown RBP12.48□□□□□ -0.41
TPM1-205ENST00000357980 Q8N1Y9 231 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 DEFB125Q8N687 156 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 TP53TG3Q9ULZ0 132 aa12.48□□□□□ -0.41
TPM1-205ENST00000357980 IGHV4-4A0A075B6R2 117 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 INSP01308 110 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 APCSP02743 223 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 S100A4P26447 101 aaKnown RBP12.47□□□□□ -0.41
TPM1-205ENST00000357980 SSTP61278 116 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 ZNF493Q6ZR52 646 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 XCL2Q9UBD3 114 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 MUC4Q99102 2169 aa12.47□□□□□ -0.41
TPM1-205ENST00000357980 TWIST1Q15672 202 aa12.46□□□□□ -0.41
TPM1-205ENST00000357980 PRR31Q5SQ13 230 aa12.46□□□□□ -0.41
TPM1-205ENST00000357980 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.42
TPM1-205ENST00000357980 ANK2Q01484 3957 aa12.45□□□□□ -0.42
TPM1-205ENST00000357980 CACNG7P62955 275 aa12.45□□□□□ -0.42
TPM1-205ENST00000357980 KIAA1644Q3SXP7 199 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms