RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 Q6ZPA2 131 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 IGHV1OR15-1A0A075B7D0 117 aa12.28□□□□□ -0.44
TRAPPC11-202ENST00000357207 NDUFA12Q9UI09 145 aa12.28□□□□□ -0.44
TRAPPC11-202ENST00000357207 C2CD3Q4AC94 2353 aa12.28□□□□□ -0.44
TRAPPC11-202ENST00000357207 OVOL2Q9BRP0 275 aa12.28□□□□□ -0.44
TRAPPC11-202ENST00000357207 MSRB2Q9Y3D2 182 aa12.28□□□□□ -0.44
TRAPPC11-202ENST00000357207 PCDH15Q96QU1 1955 aa12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 TAX1BP3O14907 124 aa12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 SAP30O75446 220 aa12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 CMC4P56277 68 aaPredicted RBP12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 SPAG8Q99932 426 aaPredicted RBP12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 OBSL1O75147 1896 aa12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 CRIP3Q6Q6R5 217 aa12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 KLK9Q9UKQ9 250 aa12.27□□□□□ -0.44
TRAPPC11-202ENST00000357207 CACNA1AO00555 2505 aa12.27□□□□□ -0.45
TRAPPC11-202ENST00000357207 P0C879 139 aa12.27□□□□□ -0.45
TRAPPC11-202ENST00000357207 GAGE2AQ6NT46 116 aa12.27□□□□□ -0.45
TRAPPC11-202ENST00000357207 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.45
TRAPPC11-202ENST00000357207 K7EIM0 57 aa12.27□□□□□ -0.45
TRAPPC11-202ENST00000357207 ZNF493Q6ZR52 646 aa12.27□□□□□ -0.45
TRAPPC11-202ENST00000357207 ZNF106Q9H2Y7 1883 aaKnown RBP12.26□□□□□ -0.45
TRAPPC11-202ENST00000357207 I3L2K1 104 aa12.26□□□□□ -0.45
TRAPPC11-202ENST00000357207 MSRB1Q9NZV6 116 aa12.26□□□□□ -0.45
TRAPPC11-202ENST00000357207 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
TRAPPC11-202ENST00000357207 ZNF295-AS1Q8N0V1 137 aa12.26□□□□□ -0.45
TRAPPC11-202ENST00000357207 CFHR4Q92496 578 aa12.26□□□□□ -0.45
TRAPPC11-202ENST00000357207 SHISA9B4DS77 424 aa12.26□□□□□ -0.45
TRAPPC11-202ENST00000357207 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 EDA2RQ9HAV5 297 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 K7EMI3 77 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 PLA2G5P39877 138 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 FOXE3Q13461 319 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 SH2D6Q7Z4S9 175 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 LENEPQ9Y5L5 61 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 IGLL5B9A064 214 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 INAFM2P0DMQ5 153 aa12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC11-202ENST00000357207 PLA2G2CQ5R387 149 aa12.24□□□□□ -0.45
TRAPPC11-202ENST00000357207 YPEL4Q96NS1 127 aa12.24□□□□□ -0.45
TRAPPC11-202ENST00000357207 NOTCH2Q04721 2471 aa12.24□□□□□ -0.45
TRAPPC11-202ENST00000357207 TRAV12-2A0A075B6T6 113 aa12.24□□□□□ -0.45
TRAPPC11-202ENST00000357207 MRPL36Q9P0J6 103 aaKnown RBP12.24□□□□□ -0.45
TRAPPC11-202ENST00000357207 RBAKDNA6NC62 111 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 PROP1O75360 226 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 DNAJC30Q96LL9 226 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 DKK4Q9UBT3 224 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 C2orf70A6NJV1 201 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 LAMTOR3Q9UHA4 124 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 INS-IGF2F8WCM5 200 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 PRSS33Q8NF86 280 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 NTN5Q8WTR8 489 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 RITA1Q96K30 269 aa12.23□□□□□ -0.45
TRAPPC11-202ENST00000357207 PTPN13Q12923 2485 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 FXYD2P54710 66 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 MRPL53Q96EL3 112 aaKnown RBP12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 TTTY13Q9BZ97 58 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 C9orf153Q5TBE3 101 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 FOXI2Q6ZQN5 318 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 KLHL30-AS1Q8NEE0 82 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 E7EUB6 86 aa12.22□□□□□ -0.45
TRAPPC11-202ENST00000357207 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 GNRH2O43555 120 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 BRWD1-AS2P59051 145 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 ZNF503Q96F45 646 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 MSMBP08118 114 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 CFC1BP0CG36 223 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 CFC1P0CG37 223 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 GNLYP22749 145 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 CR1LQ2VPA4 569 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 XCL2Q9UBD3 114 aa12.21□□□□□ -0.45
TRAPPC11-202ENST00000357207 F6UB75 175 aa12.21□□□□□ -0.46
TRAPPC11-202ENST00000357207 ZNF48Q96MX3 618 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC11-202ENST00000357207 MUC6Q6W4X9 2439 aa12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 K7ENP7 123 aa12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 IFITM1P13164 125 aa12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 SPRY2O43597 315 aa12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 IGHV7-4-1A0A0J9YVY3 117 aa12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 DPH3Q96FX2 82 aa12.2□□□□□ -0.46
TRAPPC11-202ENST00000357207 IGLV11-55A0A075B6I3 123 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 CTSGP08311 255 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 C19orf71A6NCJ1 209 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 WFDC2Q14508 124 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 CARD19Q96LW7 228 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 TNRC6AQ8NDV7 1962 aaKnown RBP12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 WT1P19544 449 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 SRSF2Q01130 221 aaKnown RBP12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 WDR87Q6ZQQ6 2873 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 GAGE12JA6NER3 117 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 GAGE4Q13068 117 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 GAGE5Q13069 117 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 IGFL2Q6UWQ7 119 aa12.19□□□□□ -0.46
TRAPPC11-202ENST00000357207 DSCAML1Q8TD84 2053 aa12.18□□□□□ -0.46
TRAPPC11-202ENST00000357207 IGLV2-8P01709 118 aa12.18□□□□□ -0.46
TRAPPC11-202ENST00000357207 ZNRF2Q8NHG8 242 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms