RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 C9JQL5 133 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 PFN1P07737 140 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 CRIP1P50238 77 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 CEBPGP53567 150 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 FAM222AQ5U5X8 452 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 LINC00518Q8N0U6 118 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 C11orf45Q8TAV5 145 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 TMEM263Q8WUH6 116 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 C16orf74Q96GX8 76 aa12.8□□□□□ -0.36
PDLIM7-202ENST00000355841 ANXA2RQ3ZCQ2 193 aa12.79□□□□□ -0.36
PDLIM7-202ENST00000355841 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
PDLIM7-202ENST00000355841 FAM159AQ6UWV7 190 aa12.79□□□□□ -0.36
PDLIM7-202ENST00000355841 TMEM183AQ8IXX5 376 aa12.79□□□□□ -0.36
PDLIM7-202ENST00000355841 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
PDLIM7-202ENST00000355841 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
PDLIM7-202ENST00000355841 GNRH2O43555 120 aa12.78□□□□□ -0.36
PDLIM7-202ENST00000355841 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
PDLIM7-202ENST00000355841 LINC00467Q9BRT7 94 aa12.78□□□□□ -0.36
PDLIM7-202ENST00000355841 NOP10Q9NPE3 64 aaKnown RBP12.78□□□□□ -0.36
PDLIM7-202ENST00000355841 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
PDLIM7-202ENST00000355841 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.36
PDLIM7-202ENST00000355841 CXorf65A6NEN9 183 aa12.77□□□□□ -0.36
PDLIM7-202ENST00000355841 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.36
PDLIM7-202ENST00000355841 COLCA2A8K830 154 aa12.77□□□□□ -0.36
PDLIM7-202ENST00000355841 RNF212Q495C1 297 aa12.77□□□□□ -0.36
PDLIM7-202ENST00000355841 C11orf72Q8NBR9 251 aa12.77□□□□□ -0.36
PDLIM7-202ENST00000355841 MLST8Q9BVC4 326 aa12.77□□□□□ -0.36
PDLIM7-202ENST00000355841 SH2D1AO60880 128 aa12.77□□□□□ -0.37
PDLIM7-202ENST00000355841 RHEBQ15382 184 aa12.77□□□□□ -0.37
PDLIM7-202ENST00000355841 ZFAND6Q6FIF0 208 aa12.77□□□□□ -0.37
PDLIM7-202ENST00000355841 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.37
PDLIM7-202ENST00000355841 COX8CQ7Z4L0 72 aa12.77□□□□□ -0.37
PDLIM7-202ENST00000355841 MUC7Q8TAX7 377 aa12.77□□□□□ -0.37
PDLIM7-202ENST00000355841 MDFICQ9P1T7 246 aa12.77□□□□□ -0.37
PDLIM7-202ENST00000355841 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 SPART-AS1P0CW21 52 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 GNG4P50150 75 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 RAB5BP61020 215 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 FAM162BQ5T6X4 162 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 PRR27Q6MZM9 219 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 PARLQ9H300 379 aa12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
PDLIM7-202ENST00000355841 TMEM250H0YL14 139 aa12.75□□□□□ -0.37
PDLIM7-202ENST00000355841 IGLV2-8P01709 118 aa12.75□□□□□ -0.37
PDLIM7-202ENST00000355841 TYMSP04818 313 aa12.75□□□□□ -0.37
PDLIM7-202ENST00000355841 C12orf74Q32Q52 190 aa12.75□□□□□ -0.37
PDLIM7-202ENST00000355841 TDRG1Q3Y452 100 aa12.75□□□□□ -0.37
PDLIM7-202ENST00000355841 SNURFLB1AK76 121 aa12.74□□□□□ -0.37
PDLIM7-202ENST00000355841 M0R036 132 aa12.74□□□□□ -0.37
PDLIM7-202ENST00000355841 MT-ND4LP03901 98 aa12.74□□□□□ -0.37
PDLIM7-202ENST00000355841 SRP19P09132 144 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-202ENST00000355841 DEFB130BP0DP73 79 aa12.74□□□□□ -0.37
PDLIM7-202ENST00000355841 DEFB130AP0DP74 79 aa12.74□□□□□ -0.37
PDLIM7-202ENST00000355841 Q6ZTC4 211 aa12.74□□□□□ -0.37
PDLIM7-202ENST00000355841 IGKV3D-20A0A0C4DH25 116 aa12.73□□□□□ -0.37
PDLIM7-202ENST00000355841 ORM1P02763 201 aa12.73□□□□□ -0.37
PDLIM7-202ENST00000355841 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-202ENST00000355841 SDF2L1Q9HCN8 221 aa12.73□□□□□ -0.37
PDLIM7-202ENST00000355841 RPS10P5Q9NQ39 176 aa12.73□□□□□ -0.37
PDLIM7-202ENST00000355841 C7orf77A4D0Y5 90 aa12.73□□□□□ -0.37
PDLIM7-202ENST00000355841 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
PDLIM7-202ENST00000355841 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
PDLIM7-202ENST00000355841 TMSB15BA0A087X1C1 80 aa12.72□□□□□ -0.37
PDLIM7-202ENST00000355841 IGHV3-16A0A0C4DH30 117 aa12.72□□□□□ -0.37
PDLIM7-202ENST00000355841 TCL1AP56279 114 aa12.72□□□□□ -0.37
PDLIM7-202ENST00000355841 IBA57Q5T440 356 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-202ENST00000355841 Q6ZTI0 123 aa12.72□□□□□ -0.37
PDLIM7-202ENST00000355841 KCNS1Q96KK3 526 aa12.72□□□□□ -0.37
PDLIM7-202ENST00000355841 LYRM9A8MSI8 78 aa12.71□□□□□ -0.37
PDLIM7-202ENST00000355841 B4DEV8 164 aa12.71□□□□□ -0.37
PDLIM7-202ENST00000355841 DAD1P61803 113 aa12.71□□□□□ -0.37
PDLIM7-202ENST00000355841 ZNF415Q09FC8 603 aa12.71□□□□□ -0.37
PDLIM7-202ENST00000355841 OR5I1Q13606 314 aa12.71□□□□□ -0.37
PDLIM7-202ENST00000355841 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.37
PDLIM7-202ENST00000355841 GAGE12BA1L429 117 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 GAGE7O76087 117 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 RPL19P84098 196 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 DAZ2Q13117 558 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 OCC1Q8TAD7 63 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 PHLDA1Q8WV24 401 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 MRPL16Q9NX20 251 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 TRGV1A0A0A0MS02 117 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 GRIFINA4D1Z8 144 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 SOHLH1Q5JUK2 328 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 ZNF575Q86XF7 245 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 SMIM7Q9BQ49 75 aa12.7□□□□□ -0.38
PDLIM7-202ENST00000355841 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
PDLIM7-202ENST00000355841 C9JCJ5 164 aa12.69□□□□□ -0.38
PDLIM7-202ENST00000355841 K7EN84 100 aa12.69□□□□□ -0.38
PDLIM7-202ENST00000355841 HTN3P15516 51 aa12.69□□□□□ -0.38
PDLIM7-202ENST00000355841 AKR1D1P51857 326 aa12.69□□□□□ -0.38
PDLIM7-202ENST00000355841 ZNF727A8MUV8 499 aa12.68□□□□□ -0.38
PDLIM7-202ENST00000355841 SPINK4O60575 86 aa12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 RNASE3P12724 160 aaKnown RBP12.67□□□□□ -0.38
PDLIM7-202ENST00000355841 LINC01559Q495D7 138 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms