RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 IGLL1P15814 213 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 LRP4O75096 1905 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 COL5A1P20908 1838 aaPredicted RBP7.54□□□□□ -1.2
GABPA-201ENST00000354828 TMEM61Q8N0U2 210 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 EML6Q6ZMW3 1958 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 TLN2Q9Y4G6 2542 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 TRAV2A0A0B4J234 112 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 TMEM213A2RRL7 107 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 ODF3BA8MYP8 253 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 ZNF493Q6ZR52 646 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 C16orf74Q96GX8 76 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 AGPAT4-IT1Q9H0P7 198 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 K7EMT4 169 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 DYNAPQ8N1N2 210 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 DEFB125Q8N687 156 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.54□□□□□ -1.2
GABPA-201ENST00000354828 ZNF114Q8NC26 417 aa7.54□□□□□ -1.2
GABPA-201ENST00000354828 SMIM6P0DI80 62 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 PLNP26678 52 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 PKD1L2Q7Z442 2459 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 GHRHP01286 108 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 CHD3Q12873 2000 aaKnown RBP7.53□□□□□ -1.2
GABPA-201ENST00000354828 IGLL5B9A064 214 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 I3L3M4 83 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 IGKV1-17P01599 117 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 TRBV12-3P01733 135 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 FABP2P12104 132 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 CLPSL2Q6UWE3 100 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 TMEM242Q9NWH2 141 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 LINC01548A6NM66 108 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 GGTLC3B5MD39 225 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 MRPL23Q16540 153 aaKnown RBP7.53□□□□□ -1.2
GABPA-201ENST00000354828 C16orf54Q6UWD8 224 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 FXYD5Q96DB9 178 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 DOPEY1Q5JWR5 2465 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 ABCA12Q86UK0 2595 aa7.53□□□□□ -1.2
GABPA-201ENST00000354828 GNRH2O43555 120 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 IGKCP01834 107 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 IGHG4P01861 327 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 HILS1P60008 231 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 ODF3L1Q8IXM7 274 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 ICOSQ9Y6W8 199 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 USP9YO00507 2555 aaPredicted RBP7.52□□□□□ -1.21
GABPA-201ENST00000354828 SDHAF1A6NFY7 115 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 ZNF815PA8K554 130 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 TEX22C9J3V5 150 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 H3BMM0 161 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 CRYGCP07315 174 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 UBE2WQ96B02 151 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 CHCHD1Q96BP2 118 aaKnown RBP7.52□□□□□ -1.21
GABPA-201ENST00000354828 Q6ZQT7 251 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 ZNF492Q9P255 531 aa7.52□□□□□ -1.21
GABPA-201ENST00000354828 CHD7Q9P2D1 2997 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 FSTL3O95633 263 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 NPC2P61916 151 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 TMEM170AQ8WVE7 144 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PGPEP1Q9NXJ5 209 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 BUB3O43684 328 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PRIMA1Q86XR5 153 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 GYPEP15421 78 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PET117Q6UWS5 81 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 C14orf144Q96I85 54 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PRR20EP86478 221 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PRR20CP86479 221 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PRR20DP86480 221 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PRR20BP86481 221 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 PRR20AP86496 221 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 MBD6Q96DN6 1003 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 GFRA4Q9GZZ7 299 aa7.51□□□□□ -1.21
GABPA-201ENST00000354828 USP9XQ93008 2570 aaPredicted RBP7.51□□□□□ -1.21
GABPA-201ENST00000354828 PRSS46E5RG02 174 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 UNQ9165/PRO28630Q6UXU0 137 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 RNF152Q8N8N0 203 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 LINC01006Q8NI28 216 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 C1orf43Q9BWL3 253 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 KLF5Q13887 457 aaPredicted RBP7.5□□□□□ -1.21
GABPA-201ENST00000354828 TRAV26-2A0A0B4J265 109 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 IGHV1-24A0A0C4DH33 117 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 SPRY2O43597 315 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 TP53TG1Q9Y2A0 90 aa7.5□□□□□ -1.21
GABPA-201ENST00000354828 VWC2LB2RUY7 222 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 ADAMTSL5Q6ZMM2 481 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 ZC2HC1AQ96GY0 325 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 CYYR1Q96J86 154 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 SIGLEC8Q9NYZ4 499 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 HLA-DRB4P13762 266 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 HIST2H2BDQ6DRA6 164 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 C11orf45Q8TAV5 145 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 HLA-DRB4X5D2U9 266 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 NACAE9PAV3 2078 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 LAMTOR2Q9Y2Q5 125 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 DMRT1Q9Y5R6 373 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 LENEPQ9Y5L5 61 aa7.49□□□□□ -1.21
GABPA-201ENST00000354828 IGHV3-30P01768 117 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 IGHV3-33P01772 117 aa7.48□□□□□ -1.21
GABPA-201ENST00000354828 IGHV3-30-3P0DP02 117 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms