RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 FAM223BA6NKX1 122 aa13.84□□□□□ -0.19
APP-203ENST00000354192 RPS20P60866 119 aaKnown RBP13.84□□□□□ -0.19
APP-203ENST00000354192 DEFB136Q30KP8 78 aa13.84□□□□□ -0.19
APP-203ENST00000354192 SLC25A34Q6PIV7 304 aa13.84□□□□□ -0.19
APP-203ENST00000354192 FAM223AQ8IWN6 122 aa13.84□□□□□ -0.19
APP-203ENST00000354192 C14orf178Q8N769 122 aaPredicted RBP13.84□□□□□ -0.19
APP-203ENST00000354192 TRBV6-1A0A0K0K1D8 114 aa13.83□□□□□ -0.19
APP-203ENST00000354192 M0QZK8 103 aa13.83□□□□□ -0.19
APP-203ENST00000354192 TNFRSF6BO95407 300 aa13.83□□□□□ -0.19
APP-203ENST00000354192 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.2
APP-203ENST00000354192 TRAV12-2A0A075B6T6 113 aa13.83□□□□□ -0.2
APP-203ENST00000354192 SYNJ2BPP57105 145 aa13.83□□□□□ -0.2
APP-203ENST00000354192 DKK2Q9UBU2 259 aa13.83□□□□□ -0.2
APP-203ENST00000354192 PHLDA3Q9Y5J5 127 aa13.83□□□□□ -0.2
APP-203ENST00000354192 A6NDX4 124 aa13.82□□□□□ -0.2
APP-203ENST00000354192 IGHG2P01859 326 aa13.82□□□□□ -0.2
APP-203ENST00000354192 TTTY13Q9BZ97 58 aa13.82□□□□□ -0.2
APP-203ENST00000354192 TCF21O43680 179 aa13.82□□□□□ -0.2
APP-203ENST00000354192 A0A1B0GW15 77 aa13.81□□□□□ -0.2
APP-203ENST00000354192 C7orf71A4D174 169 aa13.81□□□□□ -0.2
APP-203ENST00000354192 HBDP02042 147 aa13.81□□□□□ -0.2
APP-203ENST00000354192 IGLC6P0CF74 106 aa13.81□□□□□ -0.2
APP-203ENST00000354192 NEGR1Q7Z3B1 354 aa13.81□□□□□ -0.2
APP-203ENST00000354192 APCP25054 2843 aa13.81□□□□□ -0.2
APP-203ENST00000354192 NDUFS8O00217 210 aa13.81□□□□□ -0.2
APP-203ENST00000354192 IFI27L1Q96BM0 104 aa13.81□□□□□ -0.2
APP-203ENST00000354192 ITPR2Q14571 2701 aa13.81□□□□□ -0.2
APP-203ENST00000354192 PSMG4Q5JS54 123 aa13.81□□□□□ -0.2
APP-203ENST00000354192 NAA38Q9BRA0 125 aaKnown RBP13.81□□□□□ -0.2
APP-203ENST00000354192 MEGF9Q9H1U4 602 aa13.81□□□□□ -0.2
APP-203ENST00000354192 A0A096LNJ9 63 aa13.8□□□□□ -0.2
APP-203ENST00000354192 TRAV12-3A0A0B4J271 114 aa13.8□□□□□ -0.2
APP-203ENST00000354192 F5H697 171 aa13.8□□□□□ -0.2
APP-203ENST00000354192 ANXA2RQ3ZCQ2 193 aa13.8□□□□□ -0.2
APP-203ENST00000354192 FAM74A4Q5TZK3 123 aa13.8□□□□□ -0.2
APP-203ENST00000354192 PET117Q6UWS5 81 aa13.8□□□□□ -0.2
APP-203ENST00000354192 TMEM158Q8WZ71 300 aa13.8□□□□□ -0.2
APP-203ENST00000354192 ANKRD39Q53RE8 183 aa13.79□□□□□ -0.2
APP-203ENST00000354192 SPOCK3Q9BQ16 436 aa13.79□□□□□ -0.2
APP-203ENST00000354192 NDUFA4O00483 81 aa13.79□□□□□ -0.2
APP-203ENST00000354192 C9orf139Q6ZV77 190 aa13.79□□□□□ -0.2
APP-203ENST00000354192 RNF185Q96GF1 192 aa13.79□□□□□ -0.2
APP-203ENST00000354192 DAZ1Q9NQZ3 744 aaKnown RBP13.79□□□□□ -0.2
APP-203ENST00000354192 PEF1Q9UBV8 284 aaKnown RBP13.79□□□□□ -0.2
APP-203ENST00000354192 A0A0G2JLM5 398 aa13.79□□□□□ -0.2
APP-203ENST00000354192 VAMP3Q15836 100 aa13.79□□□□□ -0.2
APP-203ENST00000354192 GPHB5Q86YW7 130 aa13.79□□□□□ -0.2
APP-203ENST00000354192 ZNF493Q6ZR52 646 aa13.78□□□□□ -0.2
APP-203ENST00000354192 ZNF575Q86XF7 245 aa13.78□□□□□ -0.2
APP-203ENST00000354192 FOXC2Q99958 501 aa13.78□□□□□ -0.2
APP-203ENST00000354192 LINC01356Q8N9X3 169 aa13.78□□□□□ -0.2
APP-203ENST00000354192 JPT2Q9H910 190 aa13.77□□□□□ -0.2
APP-203ENST00000354192 TMEM160Q9NX00 188 aa13.77□□□□□ -0.2
APP-203ENST00000354192 A0A087WWL8 130 aa13.77□□□□□ -0.21
APP-203ENST00000354192 HOXA3O43365 443 aaPredicted RBP13.77□□□□□ -0.21
APP-203ENST00000354192 LINC01559Q495D7 138 aa13.77□□□□□ -0.21
APP-203ENST00000354192 USMG5Q96IX5 58 aa13.77□□□□□ -0.21
APP-203ENST00000354192 NIPBLQ6KC79 2804 aaeCLIP13.77□□□□□ -0.21
APP-203ENST00000354192 RPL39LQ96EH5 51 aaKnown RBP13.76□□□□□ -0.21
APP-203ENST00000354192 TENM4Q6N022 2769 aa13.76□□□□□ -0.21
APP-203ENST00000354192 IGHV7-4-1A0A0J9YVY3 117 aa13.76□□□□□ -0.21
APP-203ENST00000354192 OR2K2Q8NGT1 345 aa13.75□□□□□ -0.21
APP-203ENST00000354192 TMEM190Q8WZ59 177 aa13.75□□□□□ -0.21
APP-203ENST00000354192 CD7P09564 240 aa13.75□□□□□ -0.21
APP-203ENST00000354192 PTTG1IPP53801 180 aa13.75□□□□□ -0.21
APP-203ENST00000354192 C18orf65Q6ZTR6 163 aa13.75□□□□□ -0.21
APP-203ENST00000354192 KLK9Q9UKQ9 250 aa13.75□□□□□ -0.21
APP-203ENST00000354192 DLEU1O43261 78 aa13.75□□□□□ -0.21
APP-203ENST00000354192 PCP2Q8IVA1 136 aa13.75□□□□□ -0.21
APP-203ENST00000354192 ST20Q9HBF5 79 aa13.75□□□□□ -0.21
APP-203ENST00000354192 ASIPP42127 132 aa13.74□□□□□ -0.21
APP-203ENST00000354192 RAB37Q96AX2 223 aa13.74□□□□□ -0.21
APP-203ENST00000354192 A0A1W2PRX2 142 aa13.74□□□□□ -0.21
APP-203ENST00000354192 K7EMI3 77 aa13.74□□□□□ -0.21
APP-203ENST00000354192 Q5PR19 223 aa13.74□□□□□ -0.21
APP-203ENST00000354192 GTSCR1Q86UQ5 136 aa13.74□□□□□ -0.21
APP-203ENST00000354192 LINC00477Q96M19 166 aa13.74□□□□□ -0.21
APP-203ENST00000354192 Q96MF0 132 aa13.74□□□□□ -0.21
APP-203ENST00000354192 TRAV21A0A0B4J279 112 aa13.73□□□□□ -0.21
APP-203ENST00000354192 LINC01545Q5VT33 79 aa13.73□□□□□ -0.21
APP-203ENST00000354192 C9orf47Q6ZRZ4 202 aa13.73□□□□□ -0.21
APP-203ENST00000354192 U3KQE9 123 aa13.73□□□□□ -0.21
APP-203ENST00000354192 SPINK13Q1W4C9 94 aa13.73□□□□□ -0.21
APP-203ENST00000354192 ZNF469Q96JG9 3925 aaPredicted RBP13.73□□□□□ -0.21
APP-203ENST00000354192 PRM2P04554 102 aa13.73□□□□□ -0.21
APP-203ENST00000354192 FAM159AQ6UWV7 190 aa13.73□□□□□ -0.21
APP-203ENST00000354192 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
APP-203ENST00000354192 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
APP-203ENST00000354192 RBAKDNA6NC62 111 aa13.72□□□□□ -0.21
APP-203ENST00000354192 EMP1P54849 157 aa13.72□□□□□ -0.21
APP-203ENST00000354192 CRXO43186 299 aaPredicted RBP13.71□□□□□ -0.21
APP-203ENST00000354192 SMIM17P0DL12 118 aa13.71□□□□□ -0.21
APP-203ENST00000354192 TRAV8-6A0A0B4J262 113 aa13.71□□□□□ -0.21
APP-203ENST00000354192 ZNF843Q8N446 348 aa13.71□□□□□ -0.21
APP-203ENST00000354192 FCER1GP30273 86 aa13.71□□□□□ -0.22
APP-203ENST00000354192 OVOL1O14753 267 aa13.7□□□□□ -0.22
APP-203ENST00000354192 SRSF1Q07955 248 aaKnown RBP eCLIP13.7□□□□□ -0.22
APP-203ENST00000354192 C19orf54Q5BKX5 351 aa13.7□□□□□ -0.22
APP-203ENST00000354192 MRPS16Q9Y3D3 137 aaKnown RBP13.7□□□□□ -0.22
APP-203ENST00000354192 IGHV4OR15-8A0A075B7B6 117 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms