RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FAM223BA6NKX1 122 aa18.67■□□□□ 0.58
CPNE1-202ENST00000352393 FAM223AQ8IWN6 122 aa18.67■□□□□ 0.58
CPNE1-202ENST00000352393 CEND1Q8N111 149 aa18.67■□□□□ 0.58
CPNE1-202ENST00000352393 BPESC1Q9GZL8 116 aa18.67■□□□□ 0.58
CPNE1-202ENST00000352393 UBTD1Q9HAC8 227 aa18.67■□□□□ 0.58
CPNE1-202ENST00000352393 TRAV41A0A0B4J266 112 aa18.67■□□□□ 0.58
CPNE1-202ENST00000352393 K7ERJ3 54 aa18.67■□□□□ 0.58
CPNE1-202ENST00000352393 CRIP2P52943 208 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-202ENST00000352393 G3V4G9 280 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 IGF1P05019 195 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 PLNP26678 52 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 TMEM219Q86XT9 240 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 GPHB5Q86YW7 130 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 MAPKAPK5-AS1Q8N8E1 139 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 CSTL1Q9H114 145 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 MOB4Q9Y3A3 225 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 ZFAND2AQ8N6M9 145 aa18.65■□□□□ 0.58
CPNE1-202ENST00000352393 TRAV12-1A0A0B4J245 112 aa18.64■□□□□ 0.57
CPNE1-202ENST00000352393 ARL3P36405 182 aa18.63■□□□□ 0.57
CPNE1-202ENST00000352393 LINC00477Q96M19 166 aa18.63■□□□□ 0.57
CPNE1-202ENST00000352393 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-202ENST00000352393 SOCS3O14543 225 aa18.62■□□□□ 0.57
CPNE1-202ENST00000352393 TAL2Q16559 108 aa18.62■□□□□ 0.57
CPNE1-202ENST00000352393 NHP2Q9NX24 153 aaKnown RBP18.62■□□□□ 0.57
CPNE1-202ENST00000352393 IGF2RP11717 2491 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 ATRXP46100 2492 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 F8VRH5 84 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 SLC25A16P16260 332 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 UNQ9165/PRO28630Q6UXU0 137 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 RASL10AQ92737 203 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 LINC00527Q9UJ94 153 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 ORMDL2Q53FV1 153 aa18.61■□□□□ 0.57
CPNE1-202ENST00000352393 TRAV21A0A0B4J279 112 aa18.6■□□□□ 0.57
CPNE1-202ENST00000352393 H7C1H1 209 aa18.6■□□□□ 0.57
CPNE1-202ENST00000352393 OVOL1O14753 267 aa18.6■□□□□ 0.57
CPNE1-202ENST00000352393 SUMO2P61956 95 aaKnown RBP18.6■□□□□ 0.57
CPNE1-202ENST00000352393 TOMM6Q96B49 74 aa18.6■□□□□ 0.57
CPNE1-202ENST00000352393 J3KRW8 73 aa18.59■□□□□ 0.57
CPNE1-202ENST00000352393 TRBV12-3P01733 135 aa18.59■□□□□ 0.57
CPNE1-202ENST00000352393 C20orf78Q9BR46 151 aa18.59■□□□□ 0.57
CPNE1-202ENST00000352393 M0R381 172 aa18.59■□□□□ 0.57
CPNE1-202ENST00000352393 NDUFA4O00483 81 aa18.59■□□□□ 0.57
CPNE1-202ENST00000352393 OR10J6PQ8NGY7 276 aa18.59■□□□□ 0.57
CPNE1-202ENST00000352393 DPH3P1Q9H4G8 78 aa18.59■□□□□ 0.57
CPNE1-202ENST00000352393 RNF223E7ERA6 249 aa18.58■□□□□ 0.56
CPNE1-202ENST00000352393 E9PLD3 99 aa18.58■□□□□ 0.56
CPNE1-202ENST00000352393 MED14OSP0DP75 135 aa18.58■□□□□ 0.56
CPNE1-202ENST00000352393 ASIPP42127 132 aa18.58■□□□□ 0.56
CPNE1-202ENST00000352393 FAM19A4Q96LR4 140 aa18.58■□□□□ 0.56
CPNE1-202ENST00000352393 ASH1LQ9NR48 2969 aaKnown RBP18.57■□□□□ 0.56
CPNE1-202ENST00000352393 K7EMI3 77 aa18.57■□□□□ 0.56
CPNE1-202ENST00000352393 RIPPLY3P57055 190 aa18.57■□□□□ 0.56
CPNE1-202ENST00000352393 SPTBN1Q01082 2364 aaKnown RBP18.57■□□□□ 0.56
CPNE1-202ENST00000352393 ABCA2Q9BZC7 2435 aa18.57■□□□□ 0.56
CPNE1-202ENST00000352393 SPRY2O43597 315 aa18.56■□□□□ 0.56
CPNE1-202ENST00000352393 NEXN-AS1Q8NBZ9 246 aa18.56■□□□□ 0.56
CPNE1-202ENST00000352393 RPL39LQ96EH5 51 aaKnown RBP18.56■□□□□ 0.56
CPNE1-202ENST00000352393 SCGB3A1Q96QR1 104 aa18.56■□□□□ 0.56
CPNE1-202ENST00000352393 LINC01619G3V211 115 aa18.56■□□□□ 0.56
CPNE1-202ENST00000352393 CHTOPQ9Y3Y2 248 aaKnown RBP18.56■□□□□ 0.56
CPNE1-202ENST00000352393 IGHV3OR16-10A0A075B7F0 116 aa18.55■□□□□ 0.56
CPNE1-202ENST00000352393 IGLL5B9A064 214 aa18.55■□□□□ 0.56
CPNE1-202ENST00000352393 DEFB1P60022 68 aa18.55■□□□□ 0.56
CPNE1-202ENST00000352393 ANXA2RQ3ZCQ2 193 aa18.55■□□□□ 0.56
CPNE1-202ENST00000352393 APRG1Q8IVJ8 170 aa18.55■□□□□ 0.56
CPNE1-202ENST00000352393 TRBV7-3A0A075B6L6 115 aa18.55■□□□□ 0.56
CPNE1-202ENST00000352393 S100A4P26447 101 aaKnown RBP18.55■□□□□ 0.56
CPNE1-202ENST00000352393 C14orf178Q8N769 122 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-202ENST00000352393 KLK15Q9H2R5 256 aa18.55■□□□□ 0.56
CPNE1-202ENST00000352393 HIVEP3Q5T1R4 2406 aa18.54■□□□□ 0.56
CPNE1-202ENST00000352393 SVEP1Q4LDE5 3571 aa18.54■□□□□ 0.56
CPNE1-202ENST00000352393 IGHV1-69DA0A0B4J2H0 117 aa18.54■□□□□ 0.56
CPNE1-202ENST00000352393 IGHV1-69P01742 117 aa18.54■□□□□ 0.56
CPNE1-202ENST00000352393 PHLDA3Q9Y5J5 127 aa18.54■□□□□ 0.56
CPNE1-202ENST00000352393 AGRNO00468 2067 aa18.54■□□□□ 0.56
CPNE1-202ENST00000352393 C12orf74Q32Q52 190 aa18.53■□□□□ 0.56
CPNE1-202ENST00000352393 SPOCK3Q9BQ16 436 aa18.53■□□□□ 0.56
CPNE1-202ENST00000352393 OR11H12B2RN74 326 aa18.52■□□□□ 0.56
CPNE1-202ENST00000352393 BRI3O95415 125 aa18.52■□□□□ 0.56
CPNE1-202ENST00000352393 OR11H1Q8NG94 326 aa18.52■□□□□ 0.56
CPNE1-202ENST00000352393 OR11H2Q8NH07 326 aa18.52■□□□□ 0.56
CPNE1-202ENST00000352393 COL6A6A6NMZ7 2263 aa18.52■□□□□ 0.56
CPNE1-202ENST00000352393 HIST1H4GQ99525 98 aa18.52■□□□□ 0.55
CPNE1-202ENST00000352393 MYMXA0A1B0GTQ4 84 aa18.51■□□□□ 0.55
CPNE1-202ENST00000352393 C2orf66Q6UXQ4 117 aa18.51■□□□□ 0.55
CPNE1-202ENST00000352393 BAALCQ8WXS3 180 aa18.51■□□□□ 0.55
CPNE1-202ENST00000352393 ZNF479Q96JC4 524 aa18.51■□□□□ 0.55
CPNE1-202ENST00000352393 MGPP08493 103 aa18.5■□□□□ 0.55
CPNE1-202ENST00000352393 RNASE3P12724 160 aaKnown RBP18.5■□□□□ 0.55
CPNE1-202ENST00000352393 RNASE4P34096 147 aaKnown RBP18.5■□□□□ 0.55
CPNE1-202ENST00000352393 BRD3OSQ6XYD6 125 aa18.5■□□□□ 0.55
CPNE1-202ENST00000352393 TRBV7-9A0A0J9YWB2 115 aa18.5■□□□□ 0.55
CPNE1-202ENST00000352393 H3BUA1 57 aa18.5■□□□□ 0.55
CPNE1-202ENST00000352393 NXPH4O95158 308 aa18.5■□□□□ 0.55
CPNE1-202ENST00000352393 POM121L12Q8N7R1 296 aa18.5■□□□□ 0.55
CPNE1-202ENST00000352393 USMG5Q96IX5 58 aa18.5■□□□□ 0.55
CPNE1-202ENST00000352393 A0A1B0GWB2 263 aa18.49■□□□□ 0.55
CPNE1-202ENST00000352393 F6UB75 175 aa18.49■□□□□ 0.55
CPNE1-202ENST00000352393 IGHV4-39P01824 125 aa18.49■□□□□ 0.55
CPNE1-202ENST00000352393 FOXI2Q6ZQN5 318 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms