RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 IGHV3-66A0A0C4DH42 116 aa16.32■□□□□ 0.2
PTPN18-202ENST00000347849 RNF223E7ERA6 249 aa16.32■□□□□ 0.2
PTPN18-202ENST00000347849 IGLC6P0CF74 106 aa16.32■□□□□ 0.2
PTPN18-202ENST00000347849 RNF185Q96GF1 192 aa16.32■□□□□ 0.2
PTPN18-202ENST00000347849 APCP25054 2843 aa16.32■□□□□ 0.2
PTPN18-202ENST00000347849 RPL7P18124 248 aaKnown RBP16.31■□□□□ 0.2
PTPN18-202ENST00000347849 COX8CQ7Z4L0 72 aa16.31■□□□□ 0.2
PTPN18-202ENST00000347849 MAP1LC3AQ9H492 121 aa16.31■□□□□ 0.2
PTPN18-202ENST00000347849 IGKV2D-26A0A0A0MRZ7 120 aa16.31■□□□□ 0.2
PTPN18-202ENST00000347849 EVI2AP22794 236 aa16.31■□□□□ 0.2
PTPN18-202ENST00000347849 CLPSL1A2RUU4 121 aa16.3■□□□□ 0.2
PTPN18-202ENST00000347849 PRSS1P07477 247 aa16.3■□□□□ 0.2
PTPN18-202ENST00000347849 GCSHP23434 173 aa16.3■□□□□ 0.2
PTPN18-202ENST00000347849 ZNF207O43670 478 aaKnown RBP16.3■□□□□ 0.2
PTPN18-202ENST00000347849 TGFAP01135 160 aa16.3■□□□□ 0.2
PTPN18-202ENST00000347849 LINC01356Q8N9X3 169 aa16.3■□□□□ 0.2
PTPN18-202ENST00000347849 IGHV3-49A0A0A0MS15 119 aa16.29■□□□□ 0.2
PTPN18-202ENST00000347849 IGHG4P01861 327 aa16.29■□□□□ 0.2
PTPN18-202ENST00000347849 SMIM13P0DJ93 91 aa16.29■□□□□ 0.2
PTPN18-202ENST00000347849 PPIFP30405 207 aaKnown RBP16.29■□□□□ 0.2
PTPN18-202ENST00000347849 HHLA3Q9XRX5 114 aa16.29■□□□□ 0.2
PTPN18-202ENST00000347849 LCNL1Q6ZST4 164 aa16.29■□□□□ 0.2
PTPN18-202ENST00000347849 NEGR1Q7Z3B1 354 aa16.29■□□□□ 0.2
PTPN18-202ENST00000347849 MXRA5Q9NR99 2828 aa16.29■□□□□ 0.2
PTPN18-202ENST00000347849 FBLL1A6NHQ2 334 aaKnown RBP16.28■□□□□ 0.2
PTPN18-202ENST00000347849 TRBV12-3P01733 135 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 GATA1P15976 413 aaPredicted RBP16.28■□□□□ 0.2
PTPN18-202ENST00000347849 SAMD5Q5TGI4 173 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 EEF1AKMT3Q96AZ1 226 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 TNFRSF6BO95407 300 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 TRGV3P03979 118 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 FABP2P12104 132 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 FCER1GP30273 86 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 ERCC8Q13216 396 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 ODF1Q14990 250 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 DEFB112Q30KQ8 113 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 KLK15Q9H2R5 256 aa16.28■□□□□ 0.2
PTPN18-202ENST00000347849 CRIP2P52943 208 aaPredicted RBP16.27■□□□□ 0.2
PTPN18-202ENST00000347849 FXYD2P54710 66 aa16.27■□□□□ 0.2
PTPN18-202ENST00000347849 ATP5G2Q06055 141 aa16.27■□□□□ 0.2
PTPN18-202ENST00000347849 OR5A1Q8NGJ0 315 aa16.27■□□□□ 0.2
PTPN18-202ENST00000347849 IGHG2P01859 326 aa16.27■□□□□ 0.19
PTPN18-202ENST00000347849 IGF1P05019 195 aa16.27■□□□□ 0.19
PTPN18-202ENST00000347849 HIST2H2BCQ6DN03 193 aa16.27■□□□□ 0.19
PTPN18-202ENST00000347849 NPFFR1Q9GZQ6 430 aa16.27■□□□□ 0.19
PTPN18-202ENST00000347849 FABP5P3A8MUU1 101 aa16.26■□□□□ 0.19
PTPN18-202ENST00000347849 IGHV4-59P01825 116 aa16.26■□□□□ 0.19
PTPN18-202ENST00000347849 BUB3O43684 328 aa16.26■□□□□ 0.19
PTPN18-202ENST00000347849 TMEM95Q3KNT9 176 aa16.26■□□□□ 0.19
PTPN18-202ENST00000347849 GTSCR1Q86UQ5 136 aa16.26■□□□□ 0.19
PTPN18-202ENST00000347849 TEX15Q9BXT5 2789 aa16.25■□□□□ 0.19
PTPN18-202ENST00000347849 TRBV7-1A0A0A6YYK4 115 aa16.25■□□□□ 0.19
PTPN18-202ENST00000347849 SCGB2A1O75556 95 aa16.25■□□□□ 0.19
PTPN18-202ENST00000347849 ZMAT4Q9H898 229 aa16.25■□□□□ 0.19
PTPN18-202ENST00000347849 GATA3P23771 443 aa16.25■□□□□ 0.19
PTPN18-202ENST00000347849 FOXC2Q99958 501 aa16.25■□□□□ 0.19
PTPN18-202ENST00000347849 IGKCP01834 107 aa16.24■□□□□ 0.19
PTPN18-202ENST00000347849 TMEM158Q8WZ71 300 aa16.24■□□□□ 0.19
PTPN18-202ENST00000347849 NXT2Q9NPJ8 142 aaKnown RBP16.24■□□□□ 0.19
PTPN18-202ENST00000347849 TMEM238C9JI98 176 aa16.24■□□□□ 0.19
PTPN18-202ENST00000347849 PRAC2D3DTV9 90 aa16.24■□□□□ 0.19
PTPN18-202ENST00000347849 K7ERJ3 54 aa16.24■□□□□ 0.19
PTPN18-202ENST00000347849 IGHV3-11P01762 117 aa16.24■□□□□ 0.19
PTPN18-202ENST00000347849 CHAC1Q9BUX1 264 aa16.24■□□□□ 0.19
PTPN18-202ENST00000347849 DEFB113Q30KQ7 82 aa16.23■□□□□ 0.19
PTPN18-202ENST00000347849 SVIPQ8NHG7 77 aa16.23■□□□□ 0.19
PTPN18-202ENST00000347849 LINC01546A6NGU7 62 aa16.23■□□□□ 0.19
PTPN18-202ENST00000347849 CNFNQ9BYD5 112 aa16.23■□□□□ 0.19
PTPN18-202ENST00000347849 K7EMI3 77 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 IGHV4-31P0DP07 118 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 RPL24P83731 157 aaKnown RBP16.22■□□□□ 0.19
PTPN18-202ENST00000347849 Q5PR19 223 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 ZC2HC1BQ5TFG8 222 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 PSMG3-AS1Q96PY0 264 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 TRBV25-1A0A075B6N4 114 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 RNF182Q8N6D2 247 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 TMEM160Q9NX00 188 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 HIGD1BQ9P298 99 aa16.22■□□□□ 0.19
PTPN18-202ENST00000347849 DOPEY2Q9Y3R5 2298 aa16.21■□□□□ 0.19
PTPN18-202ENST00000347849 FAM223BA6NKX1 122 aa16.21■□□□□ 0.19
PTPN18-202ENST00000347849 UNQ9165/PRO28630Q6UXU0 137 aa16.21■□□□□ 0.19
PTPN18-202ENST00000347849 FAM223AQ8IWN6 122 aa16.21■□□□□ 0.19
PTPN18-202ENST00000347849 CR1P17927 2039 aa16.21■□□□□ 0.19
PTPN18-202ENST00000347849 SRSF2Q01130 221 aaKnown RBP16.21■□□□□ 0.18
PTPN18-202ENST00000347849 IL17RELQ6ZVW7 336 aa16.21■□□□□ 0.18
PTPN18-202ENST00000347849 PF4V1P10720 104 aa16.2■□□□□ 0.18
PTPN18-202ENST00000347849 NHP2Q9NX24 153 aaKnown RBP16.2■□□□□ 0.18
PTPN18-202ENST00000347849 CHTOPQ9Y3Y2 248 aaKnown RBP16.2■□□□□ 0.18
PTPN18-202ENST00000347849 DPM2O94777 84 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 SMIM17P0DL12 118 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 ARL3P36405 182 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 C10orf99Q6UWK7 81 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 CREBBPQ92793 2442 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 PSMG4Q5JS54 123 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 KRTAP1-3Q8IUG1 177 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 Q8N8P6 123 aa16.19■□□□□ 0.18
PTPN18-202ENST00000347849 LINC01559Q495D7 138 aa16.18■□□□□ 0.18
PTPN18-202ENST00000347849 Q96MF0 132 aa16.18■□□□□ 0.18
PTPN18-202ENST00000347849 IGKV3D-20A0A0C4DH25 116 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms