RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TRRAPQ9Y4A5 3859 aa8.09□□□□□ -1.11
ECM1-201ENST00000346569 GRIFINA4D1Z8 144 aa8.09□□□□□ -1.11
ECM1-201ENST00000346569 OR11H12B2RN74 326 aa8.09□□□□□ -1.11
ECM1-201ENST00000346569 CRXO43186 299 aaPredicted RBP8.09□□□□□ -1.11
ECM1-201ENST00000346569 FABP9Q0Z7S8 132 aa8.09□□□□□ -1.11
ECM1-201ENST00000346569 DNLZQ5SXM8 178 aa8.09□□□□□ -1.11
ECM1-201ENST00000346569 LYZL1Q6UWQ5 148 aa8.09□□□□□ -1.11
ECM1-201ENST00000346569 TRAPPC1Q9Y5R8 145 aa8.09□□□□□ -1.11
ECM1-201ENST00000346569 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 C7orf71A4D174 169 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 M0R2Z0 102 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 WIPF1O43516 503 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 ARMS2P0C7Q2 107 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 RAB5BP61020 215 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 SPINK13Q1W4C9 94 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 ANXA2RQ3ZCQ2 193 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 GFI1BQ5VTD9 330 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 FER1L6-AS1Q8NA97 138 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 CNFNQ9BYD5 112 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 NBEAL1Q6ZS30 2694 aa8.08□□□□□ -1.12
ECM1-201ENST00000346569 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 TRAV12-2A0A075B6T6 113 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 TRAV12-3A0A0B4J271 114 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 SNURFLB1AK76 121 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 F2Z2F3 143 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 GNRH2O43555 120 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 SNAI2O43623 268 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BKO60814 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 MT-ND6P03923 174 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BJP06899 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 TRGC1P0CF51 173 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BOP23527 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BBP33778 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 CTRLP40313 264 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BDP58876 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BCP62807 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST2H2BEQ16778 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 TDRG1Q3Y452 100 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.07□□□□□ -1.12
ECM1-201ENST00000346569 TRPT1Q86TN4 253 aaKnown RBP8.07□□□□□ -1.12
ECM1-201ENST00000346569 ZFP82Q8N141 532 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 C3orf56Q8N813 242 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 GATD1Q8NB37 220 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BHQ93079 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BNQ99877 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 HIST1H2BMQ99879 126 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 MCRIP2Q9BUT9 160 aaKnown RBP8.07□□□□□ -1.12
ECM1-201ENST00000346569 VWFP04275 2813 aa8.07□□□□□ -1.12
ECM1-201ENST00000346569 A0A1B0GW15 77 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 HLA-DQA1P01909 254 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 OR5AL1P0C617 328 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 HBBP68871 147 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 RIGQ13278 110 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 C12orf54Q6X4T0 127 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 STHQ8IWL8 128 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 MRPL18Q9H0U6 180 aaKnown RBP8.06□□□□□ -1.12
ECM1-201ENST00000346569 NOTCH3Q9UM47 2321 aa8.06□□□□□ -1.12
ECM1-201ENST00000346569 IGHV4-4A0A075B6R2 117 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 RBMY1A1P0DJD3 496 aaKnown RBP8.05□□□□□ -1.12
ECM1-201ENST00000346569 RBMY1CP0DJD4 496 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 RNASE3P12724 160 aaKnown RBP8.05□□□□□ -1.12
ECM1-201ENST00000346569 CAMPP49913 170 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 FXYD7P58549 80 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 RBMY1FQ15415 496 aaKnown RBP8.05□□□□□ -1.12
ECM1-201ENST00000346569 MUC21Q5SSG8 566 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 ZNF493Q6ZR52 646 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 KCNS1Q96KK3 526 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 SCRT2Q9NQ03 307 aa8.05□□□□□ -1.12
ECM1-201ENST00000346569 MED14OSP0DP75 135 aa8.04□□□□□ -1.12
ECM1-201ENST00000346569 IGLL1P15814 213 aa8.04□□□□□ -1.12
ECM1-201ENST00000346569 NTF3P20783 257 aa8.04□□□□□ -1.12
ECM1-201ENST00000346569 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
ECM1-201ENST00000346569 IGHV1OR15-1A0A075B7D0 117 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 MUC21A0A0G2JKD1 596 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 MUC21A0A140T8X8 626 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 C5orf52A6NGY3 159 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 AMBPP02760 352 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 GIG44P09565 113 aaPredicted RBP8.03□□□□□ -1.12
ECM1-201ENST00000346569 RAB4BP61018 213 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 SLAQ13239 276 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 C20orf144Q9BQM9 153 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 TPPP3Q9BW30 176 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 WFDC10AQ9H1F0 79 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 MSRB1Q9NZV6 116 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 NAGKQ9UJ70 344 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 LOC105371267A0A1B0GV96 52 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 APCSP02743 223 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 S100A8P05109 93 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 ASIPP42127 132 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 KIAA1644Q3SXP7 199 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 Q8N1Y9 231 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 BORCS7Q96B45 105 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 TP53TG3Q9ULZ0 132 aa8.03□□□□□ -1.12
ECM1-201ENST00000346569 PKD1L1Q8TDX9 2849 aa8.02□□□□□ -1.12
ECM1-201ENST00000346569 IGHV3-16A0A0C4DH30 117 aa8.02□□□□□ -1.13
ECM1-201ENST00000346569 H3BVH4 76 aa8.02□□□□□ -1.13
ECM1-201ENST00000346569 NUTF2P61970 127 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms