RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 CIDEAO60543 219 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
CKLF-202ENST00000345436 ATP6V0CP27449 155 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 GCHFRP30047 84 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 LYPD5Q6UWN5 251 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 BOLA1Q9Y3E2 137 aa12.24□□□□□ -0.45
CKLF-202ENST00000345436 MUC4Q99102 2169 aa12.23□□□□□ -0.45
CKLF-202ENST00000345436 KIAA1109Q2LD37 5005 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 IGHV3-16A0A0C4DH30 117 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 GNRH2O43555 120 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 TCRAP04437 139 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 GYPEP15421 78 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
CKLF-202ENST00000345436 SAPCD1Q5SSQ6 148 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 SUN5Q8TC36 379 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 ZNF479Q96JC4 524 aa12.22□□□□□ -0.45
CKLF-202ENST00000345436 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 F6UZH7 168 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 K7EQD1 137 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 SFTA3P0C7M3 94 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 EVI2AP22794 236 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 PPT1P50897 306 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 GNG5P63218 68 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 SMUG1Q53HV7 270 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 NKX6-2Q9C056 277 aaPredicted RBP12.21□□□□□ -0.45
CKLF-202ENST00000345436 EPDR1Q9UM22 224 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 LY96Q9Y6Y9 160 aa12.21□□□□□ -0.45
CKLF-202ENST00000345436 FXYD6-FXYD2A0A087WZ82 144 aa12.2□□□□□ -0.46
CKLF-202ENST00000345436 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
CKLF-202ENST00000345436 LINC00315P59091 139 aa12.2□□□□□ -0.46
CKLF-202ENST00000345436 CYB561D1Q8N8Q1 229 aa12.2□□□□□ -0.46
CKLF-202ENST00000345436 KRTAP1-5Q9BYS1 174 aa12.2□□□□□ -0.46
CKLF-202ENST00000345436 PKHD1P08F94 4074 aa12.2□□□□□ -0.46
CKLF-202ENST00000345436 A0A1W2PRE2 83 aa12.19□□□□□ -0.46
CKLF-202ENST00000345436 TYMSP04818 313 aa12.19□□□□□ -0.46
CKLF-202ENST00000345436 FLI1Q01543 452 aaPredicted RBP12.19□□□□□ -0.46
CKLF-202ENST00000345436 TVP23CQ96ET8 276 aa12.19□□□□□ -0.46
CKLF-202ENST00000345436 PKD1P98161 4303 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 GCGP01275 180 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 IFNA7P01567 189 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 PFN1P07737 140 aaKnown RBP12.18□□□□□ -0.46
CKLF-202ENST00000345436 ZNF876PQ49A33 203 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 AKR1C8PQ5T2L2 129 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 PRNTQ86SH4 94 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 TMEM75Q8N9X5 138 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 OR2T35Q8NGX2 323 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 SGK494Q96LW2 274 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 PRADC1Q9BSG0 188 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 KRTAP17-1Q9BYP8 105 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 PGPEP1Q9NXJ5 209 aa12.18□□□□□ -0.46
CKLF-202ENST00000345436 CTXND1A0A1B0GTU2 59 aa12.17□□□□□ -0.46
CKLF-202ENST00000345436 ERVFC1-1P60608 527 aa12.17□□□□□ -0.46
CKLF-202ENST00000345436 RPL7L1Q6DKI1 246 aaKnown RBP12.17□□□□□ -0.46
CKLF-202ENST00000345436 C10orf126Q8N4M7 172 aa12.17□□□□□ -0.46
CKLF-202ENST00000345436 NHLRC2Q8NBF2 726 aa12.17□□□□□ -0.46
CKLF-202ENST00000345436 SH3BGRL3Q9H299 93 aa12.17□□□□□ -0.46
CKLF-202ENST00000345436 RGS21Q2M5E4 152 aa12.16□□□□□ -0.46
CKLF-202ENST00000345436 Q5BKY6 102 aa12.16□□□□□ -0.46
CKLF-202ENST00000345436 PTH2Q96A98 100 aa12.16□□□□□ -0.46
CKLF-202ENST00000345436 S100A4P26447 101 aaKnown RBP12.15□□□□□ -0.46
CKLF-202ENST00000345436 TIRAPP58753 221 aa12.15□□□□□ -0.46
CKLF-202ENST00000345436 STOML3Q8TAV4 291 aa12.15□□□□□ -0.46
CKLF-202ENST00000345436 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
CKLF-202ENST00000345436 FABP5P3A8MUU1 101 aa12.14□□□□□ -0.47
CKLF-202ENST00000345436 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
CKLF-202ENST00000345436 GATA1P15976 413 aaPredicted RBP12.14□□□□□ -0.47
CKLF-202ENST00000345436 RHOHQ15669 191 aa12.14□□□□□ -0.47
CKLF-202ENST00000345436 HIST1H2BAQ96A08 127 aa12.14□□□□□ -0.47
CKLF-202ENST00000345436 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
CKLF-202ENST00000345436 DNAH11Q96DT5 4516 aa12.13□□□□□ -0.47
CKLF-202ENST00000345436 TRBV6-4A0A1B0GX49 114 aa12.13□□□□□ -0.47
CKLF-202ENST00000345436 RNF222A6NCQ9 220 aa12.13□□□□□ -0.47
CKLF-202ENST00000345436 DNAH10OSP0CZ25 163 aa12.13□□□□□ -0.47
CKLF-202ENST00000345436 RS1O15537 224 aa12.12□□□□□ -0.47
CKLF-202ENST00000345436 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
CKLF-202ENST00000345436 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
CKLF-202ENST00000345436 ZNF80P51504 273 aaPredicted RBP12.12□□□□□ -0.47
CKLF-202ENST00000345436 CDPF1Q6NVV7 123 aa12.12□□□□□ -0.47
CKLF-202ENST00000345436 PEX7O00628 323 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 CRYGDP07320 174 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 UBE2G2P60604 165 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 PIK3CD-AS1Q5SR53 167 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 CFAP126Q5VTH2 177 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 Q6ZRN7 208 aaPredicted RBP12.11□□□□□ -0.47
CKLF-202ENST00000345436 SLC25A29Q8N8R3 303 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 C9orf85Q96MD7 179 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
CKLF-202ENST00000345436 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
CKLF-202ENST00000345436 A8MWV9 139 aa12.1□□□□□ -0.47
CKLF-202ENST00000345436 ARPC5O15511 151 aa12.1□□□□□ -0.47
CKLF-202ENST00000345436 ASIPP42127 132 aa12.1□□□□□ -0.47
CKLF-202ENST00000345436 WFDC10BQ8IUB3 73 aa12.1□□□□□ -0.47
CKLF-202ENST00000345436 MAPKAPK5-AS1Q8N8E1 139 aa12.1□□□□□ -0.47
CKLF-202ENST00000345436 DYNC1H1Q14204 4646 aaKnown RBP12.09□□□□□ -0.47
CKLF-202ENST00000345436 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
CKLF-202ENST00000345436 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms