RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 CDKN1BP46527 198 aa16.33■□□□□ 0.21
CACNB1-201ENST00000344140 S100A8P05109 93 aa16.33■□□□□ 0.2
CACNB1-201ENST00000344140 CTRLP40313 264 aa16.33■□□□□ 0.2
CACNB1-201ENST00000344140 CAMPP49913 170 aa16.33■□□□□ 0.2
CACNB1-201ENST00000344140 ODF3L2Q3SX64 289 aa16.33■□□□□ 0.2
CACNB1-201ENST00000344140 LYZL1Q6UWQ5 148 aa16.33■□□□□ 0.2
CACNB1-201ENST00000344140 AMTNQ6UX39 209 aa16.33■□□□□ 0.2
CACNB1-201ENST00000344140 C7orf71A4D174 169 aa16.32■□□□□ 0.2
CACNB1-201ENST00000344140 OR11H12B2RN74 326 aa16.32■□□□□ 0.2
CACNB1-201ENST00000344140 INSL3P51460 131 aa16.32■□□□□ 0.2
CACNB1-201ENST00000344140 KIR3DS1Q14943 382 aa16.32■□□□□ 0.2
CACNB1-201ENST00000344140 Q6ZQT7 251 aa16.32■□□□□ 0.2
CACNB1-201ENST00000344140 GRIFINA4D1Z8 144 aa16.31■□□□□ 0.2
CACNB1-201ENST00000344140 F2Z2F3 143 aa16.31■□□□□ 0.2
CACNB1-201ENST00000344140 ARMS2P0C7Q2 107 aa16.31■□□□□ 0.2
CACNB1-201ENST00000344140 C3orf56Q8N813 242 aa16.31■□□□□ 0.2
CACNB1-201ENST00000344140 FAM110AQ9BQ89 295 aa16.31■□□□□ 0.2
CACNB1-201ENST00000344140 CLUHP3Q96NS8 147 aa16.31■□□□□ 0.2
CACNB1-201ENST00000344140 NAGKQ9UJ70 344 aa16.31■□□□□ 0.2
CACNB1-201ENST00000344140 BEAN1Q3B7T3 259 aa16.3■□□□□ 0.2
CACNB1-201ENST00000344140 TENM1Q9UKZ4 2725 aa16.3■□□□□ 0.2
CACNB1-201ENST00000344140 FBN1P35555 2871 aaKnown RBP16.3■□□□□ 0.2
CACNB1-201ENST00000344140 M0R2Z0 102 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 ZNF124Q15973 351 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 SPINK13Q1W4C9 94 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 GFI1BQ5VTD9 330 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 APCSP02743 223 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 C9orf66Q5T8R8 295 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 ZNF747Q9BV97 191 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 CNFNQ9BYD5 112 aa16.29■□□□□ 0.2
CACNB1-201ENST00000344140 TRAV12-3A0A0B4J271 114 aa16.28■□□□□ 0.2
CACNB1-201ENST00000344140 ZNF324O75467 553 aaPredicted RBP16.28■□□□□ 0.2
CACNB1-201ENST00000344140 ANXA2RQ3ZCQ2 193 aa16.28■□□□□ 0.2
CACNB1-201ENST00000344140 AGRNO00468 2067 aa16.28■□□□□ 0.2
CACNB1-201ENST00000344140 KCNS1Q96KK3 526 aa16.27■□□□□ 0.2
CACNB1-201ENST00000344140 TRAV12-2A0A075B6T6 113 aa16.27■□□□□ 0.19
CACNB1-201ENST00000344140 LOC105371267A0A1B0GV96 52 aa16.27■□□□□ 0.19
CACNB1-201ENST00000344140 MUC21Q5SSG8 566 aa16.27■□□□□ 0.19
CACNB1-201ENST00000344140 FAM159AQ6UWV7 190 aa16.27■□□□□ 0.19
CACNB1-201ENST00000344140 SSBP4Q9BWG4 385 aaPredicted RBP16.27■□□□□ 0.19
CACNB1-201ENST00000344140 OR5AL1P0C617 328 aa16.26■□□□□ 0.19
CACNB1-201ENST00000344140 NDUFA6P56556 154 aa16.26■□□□□ 0.19
CACNB1-201ENST00000344140 STHQ8IWL8 128 aa16.26■□□□□ 0.19
CACNB1-201ENST00000344140 GATD1Q8NB37 220 aa16.26■□□□□ 0.19
CACNB1-201ENST00000344140 MCRIP2Q9BUT9 160 aaKnown RBP16.26■□□□□ 0.19
CACNB1-201ENST00000344140 C5orf52A6NGY3 159 aa16.25■□□□□ 0.19
CACNB1-201ENST00000344140 ASIPP42127 132 aa16.25■□□□□ 0.19
CACNB1-201ENST00000344140 SLAQ13239 276 aa16.25■□□□□ 0.19
CACNB1-201ENST00000344140 DNLZQ5SXM8 178 aa16.25■□□□□ 0.19
CACNB1-201ENST00000344140 MDFIQ99750 246 aa16.25■□□□□ 0.19
CACNB1-201ENST00000344140 RBMY1BA6NDE4 496 aaKnown RBP16.25■□□□□ 0.19
CACNB1-201ENST00000344140 RBMY1EA6NEQ0 496 aaKnown RBP16.25■□□□□ 0.19
CACNB1-201ENST00000344140 SNAI2O43623 268 aa16.25■□□□□ 0.19
CACNB1-201ENST00000344140 RBMY1DP0C7P1 496 aaKnown RBP16.25■□□□□ 0.19
CACNB1-201ENST00000344140 SNRPEP62304 92 aaKnown RBP16.25■□□□□ 0.19
CACNB1-201ENST00000344140 TDRG1Q3Y452 100 aa16.25■□□□□ 0.19
CACNB1-201ENST00000344140 MED14OSP0DP75 135 aa16.24■□□□□ 0.19
CACNB1-201ENST00000344140 S100A4P26447 101 aaKnown RBP16.24■□□□□ 0.19
CACNB1-201ENST00000344140 SHISA2Q6UWI4 295 aa16.24■□□□□ 0.19
CACNB1-201ENST00000344140 NTF3P20783 257 aa16.23■□□□□ 0.19
CACNB1-201ENST00000344140 TWIST1Q15672 202 aa16.23■□□□□ 0.19
CACNB1-201ENST00000344140 ZNF493Q6ZR52 646 aa16.23■□□□□ 0.19
CACNB1-201ENST00000344140 WFDC9Q8NEX5 89 aa16.23■□□□□ 0.19
CACNB1-201ENST00000344140 AMBPP02760 352 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 CD7P09564 240 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 CACNG7P62955 275 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 MUC21A0A0G2JKD1 596 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 MUC21A0A140T8X8 626 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 H3BVH4 76 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 FXYD7P58549 80 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 TRPT1Q86TN4 253 aaKnown RBP16.22■□□□□ 0.19
CACNB1-201ENST00000344140 C19orf73Q9NVV2 129 aa16.22■□□□□ 0.19
CACNB1-201ENST00000344140 CRXO43186 299 aaPredicted RBP16.21■□□□□ 0.19
CACNB1-201ENST00000344140 KIAA1644Q3SXP7 199 aa16.21■□□□□ 0.19
CACNB1-201ENST00000344140 COL6A5A8TX70 2615 aa16.21■□□□□ 0.19
CACNB1-201ENST00000344140 IGHV4-4A0A075B6R2 117 aa16.2■□□□□ 0.18
CACNB1-201ENST00000344140 IGHV1OR15-1A0A075B7D0 117 aa16.2■□□□□ 0.18
CACNB1-201ENST00000344140 GNRH2O43555 120 aa16.2■□□□□ 0.18
CACNB1-201ENST00000344140 SSTP61278 116 aa16.2■□□□□ 0.18
CACNB1-201ENST00000344140 NUTF2P61970 127 aaKnown RBP16.2■□□□□ 0.18
CACNB1-201ENST00000344140 COA6Q5JTJ3 125 aaKnown RBP16.2■□□□□ 0.18
CACNB1-201ENST00000344140 SPATA3Q8NHX4 192 aa16.2■□□□□ 0.18
CACNB1-201ENST00000344140 OR10AG1Q8NH19 301 aa16.2■□□□□ 0.18
CACNB1-201ENST00000344140 C20orf144Q9BQM9 153 aa16.19■□□□□ 0.18
CACNB1-201ENST00000344140 SCRT2Q9NQ03 307 aa16.19■□□□□ 0.18
CACNB1-201ENST00000344140 UBE2CO00762 179 aa16.18■□□□□ 0.18
CACNB1-201ENST00000344140 HOXA5P20719 270 aa16.18■□□□□ 0.18
CACNB1-201ENST00000344140 SPANXN1Q5VSR9 72 aa16.18■□□□□ 0.18
CACNB1-201ENST00000344140 LOC102724200A0A096LPH7 203 aaPredicted RBP16.18■□□□□ 0.18
CACNB1-201ENST00000344140 INSP01308 110 aa16.18■□□□□ 0.18
CACNB1-201ENST00000344140 SRIP30626 198 aa16.18■□□□□ 0.18
CACNB1-201ENST00000344140 TMEM191AQ9H0A3 160 aa16.18■□□□□ 0.18
CACNB1-201ENST00000344140 PHLDA3Q9Y5J5 127 aa16.18■□□□□ 0.18
CACNB1-201ENST00000344140 RNASE3P12724 160 aaKnown RBP16.17■□□□□ 0.18
CACNB1-201ENST00000344140 Q0VG73 95 aa16.17■□□□□ 0.18
CACNB1-201ENST00000344140 GTSCR1Q86UQ5 136 aa16.17■□□□□ 0.18
CACNB1-201ENST00000344140 MSRB1Q9NZV6 116 aa16.17■□□□□ 0.18
CACNB1-201ENST00000344140 TIMM8BQ9Y5J9 83 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-201ENST00000344140 VWFP04275 2813 aa16.17■□□□□ 0.18
CACNB1-201ENST00000344140 FAM104BQ5XKR9 115 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms