RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 F5H768 121 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
DNMT1-201ENST00000340748 YLPM1P49750 1951 aaKnown RBP10.06□□□□□ -0.8
DNMT1-201ENST00000340748 DEFB136Q30KP8 78 aa10.06□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE2BQ13066 116 aa10.06□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
DNMT1-201ENST00000340748 GTF3C1Q12789 2109 aa10.06□□□□□ -0.8
DNMT1-201ENST00000340748 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
DNMT1-201ENST00000340748 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 I3L2K1 104 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 K7EMI3 77 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 GP9P14770 177 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 C17orf77Q96MU5 243 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 IGF2RP11717 2491 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 DYNAPQ8N1N2 210 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
DNMT1-201ENST00000340748 SNHG12Q9BXW3 62 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 TAL2Q16559 108 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 C9orf118A6NHY6 69 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 F8VRH5 84 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 IGLL1P15814 213 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 LAMTOR3Q9UHA4 124 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 TRBV20-1A0A075B6N2 111 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 TRAV8-3A0A0A6YYJ7 113 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 ZNRF2Q8NHG8 242 aa10.04□□□□□ -0.8
DNMT1-201ENST00000340748 SIVA1O15304 175 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 ADAMTSL5Q6ZMM2 481 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 IGFBPL1Q8WX77 278 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 AGPAT4-IT1Q9H0P7 198 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 IGLV11-55A0A075B6I3 123 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 INS-IGF2F8WCM5 200 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 LURAP1LQ8IV03 231 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 IGHV7-81A0A0B4J1V7 117 aa10.03□□□□□ -0.8
DNMT1-201ENST00000340748 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
DNMT1-201ENST00000340748 K7EIM0 57 aa10.02□□□□□ -0.8
DNMT1-201ENST00000340748 EGR2P11161 476 aaPredicted RBP10.02□□□□□ -0.8
DNMT1-201ENST00000340748 FOXE3Q13461 319 aa10.02□□□□□ -0.8
DNMT1-201ENST00000340748 BOD1L2Q8IYS8 172 aa10.02□□□□□ -0.8
DNMT1-201ENST00000340748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.02□□□□□ -0.818e-7■■■■■ 27.5
DNMT1-201ENST00000340748 C9JAW5 83 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 GAGE7O76087 117 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 CFHR3Q02985 330 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 KLF12Q9Y4X4 402 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 SMAD5-AS1Q9Y6J3 95 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 CFHR4Q92496 578 aa10.02□□□□□ -0.81
DNMT1-201ENST00000340748 ZNF106Q9H2Y7 1883 aaKnown RBP10.02□□□□□ -0.81
DNMT1-201ENST00000340748 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
DNMT1-201ENST00000340748 BLCAPP62952 87 aa10.01□□□□□ -0.81
DNMT1-201ENST00000340748 RHOHQ15669 191 aa10.01□□□□□ -0.81
DNMT1-201ENST00000340748 WNK2Q9Y3S1 2297 aa10.01□□□□□ -0.81
DNMT1-201ENST00000340748 DOCK10Q96BY6 2186 aa10.01□□□□□ -0.81
DNMT1-201ENST00000340748 MYCNOSP40205 109 aa10.01□□□□□ -0.81
DNMT1-201ENST00000340748 HOXD3P31249 432 aaPredicted RBP10□□□□□ -0.81
DNMT1-201ENST00000340748 HERVK_113P63121 156 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 COA6Q5JTJ3 125 aaKnown RBP10□□□□□ -0.81
DNMT1-201ENST00000340748 IGF2BP2-AS1Q96M15 143 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 IGLV2-23P01705 113 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 RITA1Q96K30 269 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 SMR3AQ99954 134 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 CITED2Q99967 270 aaPredicted RBP10□□□□□ -0.81
DNMT1-201ENST00000340748 CEND1Q8N111 149 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 PTPRSQ13332 1948 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 ASPHD1Q5U4P2 390 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 PLA2G2EQ9NZK7 142 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 NDUFA12Q9UI09 145 aa10□□□□□ -0.81
DNMT1-201ENST00000340748 IGLV2-14P01704 120 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 PATE2Q6UY27 113 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 ZNF747Q9BV97 191 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 F8WEM9 126 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 IGKV1-17P01599 117 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 SLURP1P55000 103 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 KRTAP10-9P60411 292 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 IL17DQ8TAD2 202 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 IGHV3-38A0A0C4DH36 116 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 BVES-AS1Q5T3Y7 98 aa9.99□□□□□ -0.81
DNMT1-201ENST00000340748 ZNF561-AS1K7EIQ3 104 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 RNF152Q8N8N0 203 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 ZNF625Q96I27 306 aaPredicted RBP9.98□□□□□ -0.81
DNMT1-201ENST00000340748 DOPEY2Q9Y3R5 2298 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 WI2-2373I1.2A0A1W2PRP0 233 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 CTSGP08311 255 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 KLK5Q9Y337 293 aaPredicted RBP9.98□□□□□ -0.81
DNMT1-201ENST00000340748 OBSL1O75147 1896 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 GAGE6Q13070 117 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 TMEM131Q92545 1883 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 K7EP34 96 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 GNRH2O43555 120 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 OCIAD2Q56VL3 154 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 ODF3L1Q8IXM7 274 aa9.98□□□□□ -0.81
DNMT1-201ENST00000340748 F8W1H4 67 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 J3QQQ9 107 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 CRYGCP07315 174 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms