RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 TSSC4Q9Y5U2 329 aaPredicted RBP11.51□□□□□ -0.57
FGFR1-202ENST00000335922 K7ERJ3 54 aa11.51□□□□□ -0.57
FGFR1-202ENST00000335922 NPYP01303 97 aa11.51□□□□□ -0.57
FGFR1-202ENST00000335922 DKK2Q9UBU2 259 aa11.51□□□□□ -0.57
FGFR1-202ENST00000335922 SAP30O75446 220 aa11.5□□□□□ -0.57
FGFR1-202ENST00000335922 LAGE3Q14657 143 aa11.5□□□□□ -0.57
FGFR1-202ENST00000335922 PCP2Q8IVA1 136 aa11.5□□□□□ -0.57
FGFR1-202ENST00000335922 VCX2Q9H322 139 aa11.5□□□□□ -0.57
FGFR1-202ENST00000335922 IGHV4-59P01825 116 aa11.5□□□□□ -0.57
FGFR1-202ENST00000335922 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
FGFR1-202ENST00000335922 MRPL51Q4U2R6 128 aaKnown RBP11.5□□□□□ -0.57
FGFR1-202ENST00000335922 DEFB112Q30KQ8 113 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 IGKV1-17P01599 117 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 ZNF562Q6V9R5 426 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 C3orf56Q8N813 242 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 TNFRSF18Q9Y5U5 241 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 DNAL4O96015 105 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 RNF5Q99942 180 aa11.49□□□□□ -0.57
FGFR1-202ENST00000335922 IGKV1D-37A0A075B6S9 117 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 C10orf105Q8TEF2 133 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 H3BMG7 143 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 LTAP01374 205 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 CGB3P0DN86 165 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 CGB7P0DN87 165 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 LOXL1Q08397 574 aaPredicted RBP11.48□□□□□ -0.57
FGFR1-202ENST00000335922 THAP8Q8NA92 274 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 OVOL3O00110 214 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 GP9P14770 177 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 GAGE2BQ13066 116 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 GAGE2EQ4V326 116 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 PAPPA-AS1Q5QFB9 102 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 FAM104BQ5XKR9 115 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 ZNF491Q8N8L2 437 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 GAGE2DQ9UEU5 116 aa11.48□□□□□ -0.57
FGFR1-202ENST00000335922 TNFRSF6BO95407 300 aa11.47□□□□□ -0.57
FGFR1-202ENST00000335922 ORMDL2Q53FV1 153 aa11.47□□□□□ -0.57
FGFR1-202ENST00000335922 ZFP36P26651 326 aaKnown RBP11.47□□□□□ -0.57
FGFR1-202ENST00000335922 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
FGFR1-202ENST00000335922 ZNF492Q9P255 531 aa11.47□□□□□ -0.57
FGFR1-202ENST00000335922 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
FGFR1-202ENST00000335922 COX8AP10176 69 aa11.47□□□□□ -0.57
FGFR1-202ENST00000335922 ZNF747Q9BV97 191 aa11.47□□□□□ -0.57
FGFR1-202ENST00000335922 C9orf118A6NHY6 69 aa11.46□□□□□ -0.57
FGFR1-202ENST00000335922 C2orf70A6NJV1 201 aa11.46□□□□□ -0.57
FGFR1-202ENST00000335922 SLC50A1Q9BRV3 221 aa11.46□□□□□ -0.57
FGFR1-202ENST00000335922 IGHV3-73A0A0B4J1V6 119 aa11.46□□□□□ -0.58
FGFR1-202ENST00000335922 DTX2Q86UW9 622 aa11.46□□□□□ -0.58
FGFR1-202ENST00000335922 TRAV21A0A0B4J279 112 aa11.45□□□□□ -0.58
FGFR1-202ENST00000335922 EGR2P11161 476 aaPredicted RBP11.45□□□□□ -0.58
FGFR1-202ENST00000335922 PRR25Q96S07 402 aa11.45□□□□□ -0.58
FGFR1-202ENST00000335922 ERG28Q9UKR5 140 aa11.45□□□□□ -0.58
FGFR1-202ENST00000335922 NEGR1Q7Z3B1 354 aa11.45□□□□□ -0.58
FGFR1-202ENST00000335922 HTN3P15516 51 aa11.45□□□□□ -0.58
FGFR1-202ENST00000335922 H3BRM9 83 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 TET2Q6N021 2002 aaPredicted RBP11.44□□□□□ -0.58
FGFR1-202ENST00000335922 BOD1L1Q8NFC6 3051 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 UBE2L6O14933 153 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 IGLV2-23P01705 113 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 DLX4Q92988 240 aaPredicted RBP11.44□□□□□ -0.58
FGFR1-202ENST00000335922 SRSF8Q9BRL6 282 aaKnown RBP11.44□□□□□ -0.58
FGFR1-202ENST00000335922 GFRA4Q9GZZ7 299 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 SMPXQ9UHP9 88 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 ZNF292O60281 2723 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 A0A087WWL8 130 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 VWC2LB2RUY7 222 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 CT83Q5H943 113 aa11.44□□□□□ -0.58
FGFR1-202ENST00000335922 WIPF2Q8TF74 440 aaPredicted RBP11.44□□□□□ -0.58
FGFR1-202ENST00000335922 MRPL35Q9NZE8 188 aaKnown RBP11.43□□□□□ -0.58
FGFR1-202ENST00000335922 LINC01549A6NIU2 74 aa11.43□□□□□ -0.58
FGFR1-202ENST00000335922 BLCAPP62952 87 aa11.43□□□□□ -0.58
FGFR1-202ENST00000335922 KLF5Q13887 457 aaPredicted RBP11.43□□□□□ -0.58
FGFR1-202ENST00000335922 C9JAW5 83 aa11.43□□□□□ -0.58
FGFR1-202ENST00000335922 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
FGFR1-202ENST00000335922 HOXB4P17483 251 aaPredicted RBP11.42□□□□□ -0.58
FGFR1-202ENST00000335922 SPATA12Q7Z6I5 190 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 NCOR1P1Q9H4R4 102 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 MAP1AP78559 2803 aaPredicted RBP11.42□□□□□ -0.58
FGFR1-202ENST00000335922 CENPVL3A0A0U1RRI6 287 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 H3BRN7 92 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 K7EIM0 57 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 PAX1P15863 534 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 DEFB1P60022 68 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 LINC00311Q8N616 119 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 MBD6Q96DN6 1003 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 CSTL1Q9H114 145 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 ANKRD17O75179 2603 aaKnown RBP11.42□□□□□ -0.58
FGFR1-202ENST00000335922 H7C1H1 209 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 WFDC11Q8NEX6 87 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 TAX1BP3O14907 124 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 ZNF876PQ49A33 203 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 SIGLEC15Q6ZMC9 328 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 SH2D6Q7Z4S9 175 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 DEFB125Q8N687 156 aa11.42□□□□□ -0.58
FGFR1-202ENST00000335922 AZU1P20160 251 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms