RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 IGHV3OR16-10A0A075B7F0 116 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 G3V318 75 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 H3BVH4 76 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 TTC9CQ8N5M4 171 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 TEX29Q8N6K0 151 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 OR9G4Q8NGQ1 327 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 TM2D2Q9BX73 214 aa12.81□□□□□ -0.36
CDC42EP4-201ENST00000335793 IGLL5B9A064 214 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 FOXI1Q12951 378 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 CHAC1Q9BUX1 264 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 IGKV3-7A0A075B6H7 116 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 RPL11P62913 178 aaKnown RBP12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 ZNF493Q6ZR52 646 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 UBTD1Q9HAC8 227 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 A0A096LNJ9 63 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 IGHV7-81A0A0B4J1V7 117 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 F8W735 103 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 GAS8-AS1O95177 125 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 NFE4Q86UQ8 179 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 HIVEP3Q5T1R4 2406 aa12.8□□□□□ -0.36
CDC42EP4-201ENST00000335793 LOC107984156A0A0G2JMH3 177 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 ARL17AQ8IVW1 177 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 SMAD5-AS1Q9Y6J3 95 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 BSNQ9UPA5 3926 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 ZFP36P26651 326 aaKnown RBP12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 ZFAND6Q6FIF0 208 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 RAXQ9Y2V3 346 aa12.79□□□□□ -0.36
CDC42EP4-201ENST00000335793 ATP6V0E1O15342 81 aa12.78□□□□□ -0.36
CDC42EP4-201ENST00000335793 LGALS9BQ3B8N2 356 aa12.78□□□□□ -0.36
CDC42EP4-201ENST00000335793 SPANXN1Q5VSR9 72 aa12.78□□□□□ -0.36
CDC42EP4-201ENST00000335793 LGALS9CQ6DKI2 356 aa12.78□□□□□ -0.36
CDC42EP4-201ENST00000335793 FOXC2Q99958 501 aa12.78□□□□□ -0.36
CDC42EP4-201ENST00000335793 OVOL3O00110 214 aa12.77□□□□□ -0.36
CDC42EP4-201ENST00000335793 YAE1D1Q9NRH1 226 aa12.77□□□□□ -0.36
CDC42EP4-201ENST00000335793 TMEM160Q9NX00 188 aa12.77□□□□□ -0.36
CDC42EP4-201ENST00000335793 TNFRSF6BO95407 300 aa12.77□□□□□ -0.37
CDC42EP4-201ENST00000335793 PPDPFQ9H3Y8 114 aa12.77□□□□□ -0.37
CDC42EP4-201ENST00000335793 PSMB2P49721 201 aa12.77□□□□□ -0.37
CDC42EP4-201ENST00000335793 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
CDC42EP4-201ENST00000335793 M0QXV9 152 aa12.76□□□□□ -0.37
CDC42EP4-201ENST00000335793 KLK15Q9H2R5 256 aa12.76□□□□□ -0.37
CDC42EP4-201ENST00000335793 CSPG4Q6UVK1 2322 aa12.76□□□□□ -0.37
CDC42EP4-201ENST00000335793 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
CDC42EP4-201ENST00000335793 ODF3BA8MYP8 253 aa12.76□□□□□ -0.37
CDC42EP4-201ENST00000335793 Q8N9W7 124 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 TMEM158Q8WZ71 300 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 C16orf92Q96LL3 132 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 METTL26Q96S19 204 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 SPRY2O43597 315 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 SAA4P35542 130 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 HIST1H4GQ99525 98 aa12.75□□□□□ -0.37
CDC42EP4-201ENST00000335793 PF4V1P10720 104 aa12.74□□□□□ -0.37
CDC42EP4-201ENST00000335793 S100A4P26447 101 aaKnown RBP12.74□□□□□ -0.37
CDC42EP4-201ENST00000335793 DTX2Q86UW9 622 aa12.74□□□□□ -0.37
CDC42EP4-201ENST00000335793 MSRB2Q9Y3D2 182 aa12.74□□□□□ -0.37
CDC42EP4-201ENST00000335793 E9PLD3 99 aa12.74□□□□□ -0.37
CDC42EP4-201ENST00000335793 ADORA2A-AS1P86434 159 aa12.74□□□□□ -0.37
CDC42EP4-201ENST00000335793 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
CDC42EP4-201ENST00000335793 TRBV25-1A0A075B6N4 114 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 BUB3O43684 328 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 GAGE7O76087 117 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 GAGE12FP0CL80 117 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 GAGE12GP0CL81 117 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 GAGE12IP0CL82 117 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 GAGE4Q13068 117 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 MINOS1Q5TGZ0 78 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 TMEM190Q8WZ59 177 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 MINOS1-NBL1R4GNA1 71 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 MYOZ3Q8TDC0 251 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 TNFRSF18Q9Y5U5 241 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
CDC42EP4-201ENST00000335793 IGLC6P0CF74 106 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 TTC32Q5I0X7 151 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 GATD1Q8NB37 220 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 PHLDA1Q8WV24 401 aaPredicted RBP12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 U3KQK5 164 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 USP24Q9UPU5 2620 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 M0R381 172 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 IGHG4P01861 327 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 TRGV3P03979 118 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 EEF1AKMT3Q96AZ1 226 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 CEND1Q8N111 149 aa12.72□□□□□ -0.37
CDC42EP4-201ENST00000335793 DOPEY2Q9Y3R5 2298 aa12.71□□□□□ -0.37
CDC42EP4-201ENST00000335793 ZNF502Q8TBZ5 544 aa12.71□□□□□ -0.37
CDC42EP4-201ENST00000335793 OOSP1A8MZH6 123 aa12.71□□□□□ -0.38
CDC42EP4-201ENST00000335793 KLRB1Q12918 225 aa12.71□□□□□ -0.38
CDC42EP4-201ENST00000335793 FAM159AQ6UWV7 190 aa12.71□□□□□ -0.38
CDC42EP4-201ENST00000335793 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.71□□□□□ -0.38
CDC42EP4-201ENST00000335793 Q6ZQT7 251 aa12.71□□□□□ -0.38
CDC42EP4-201ENST00000335793 FAM110DQ8TAY7 271 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms