RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 COL6A5A8TX70 2615 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 TRBV6-1A0A0K0K1D8 114 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 FAM231BA6NCW3 169 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 M0R2Z0 102 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 IGLV2-11P01706 119 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 IGLC2P0DOY2 106 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 ZNF25P17030 456 aaPredicted RBP7.18□□□□□ -1.26
C11orf54-201ENST00000331239 SPATA45Q537H7 98 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 SPATA3Q8NHX4 192 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 MRPL53Q96EL3 112 aaKnown RBP7.18□□□□□ -1.26
C11orf54-201ENST00000331239 PGLYRP4Q96LB8 373 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 SLC50A1Q9BRV3 221 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 TRBV19A0A075B6N1 114 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 A0A1W2PRX2 142 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 NPSP0C0P6 89 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 TM4SF20Q53R12 229 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 SIGLEC15Q6ZMC9 328 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 PRNTQ86SH4 94 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 FAM110AQ9BQ89 295 aa7.18□□□□□ -1.26
C11orf54-201ENST00000331239 FBLL1A6NHQ2 334 aaKnown RBP7.17□□□□□ -1.26
C11orf54-201ENST00000331239 DEFB136Q30KP8 78 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 FAM162BQ5T6X4 162 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 C9orf66Q5T8R8 295 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 C11orf44Q8N8P7 122 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 TMEM75Q8N9X5 138 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 TMEM208Q9BTX3 173 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 K7EQM0 130 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 ZNF479Q96JC4 524 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 SPXQ9BT56 116 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 UQCR10Q9UDW1 63 aa7.17□□□□□ -1.26
C11orf54-201ENST00000331239 ID1P41134 155 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 DEFB114Q30KQ6 69 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 PRR31Q5SQ13 230 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 RNASE8Q8TDE3 154 aaKnown RBP7.16□□□□□ -1.26
C11orf54-201ENST00000331239 SPAG8Q99932 426 aaPredicted RBP7.16□□□□□ -1.26
C11orf54-201ENST00000331239 IGHV3-35A0A0C4DH35 117 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 IGLC3P0DOY3 106 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 FOXA3P55318 350 aaPredicted RBP7.16□□□□□ -1.26
C11orf54-201ENST00000331239 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 DYNLRB2Q8TF09 96 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 ZC2HC1AQ96GY0 325 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
C11orf54-201ENST00000331239 LOC102724200A0A096LPH7 203 aaPredicted RBP7.15□□□□□ -1.26
C11orf54-201ENST00000331239 IGLV1-51P01701 117 aa7.15□□□□□ -1.26
C11orf54-201ENST00000331239 EBLN2Q6P2I7 272 aa7.15□□□□□ -1.26
C11orf54-201ENST00000331239 URB1-AS1Q96HZ7 61 aa7.15□□□□□ -1.26
C11orf54-201ENST00000331239 C17orf77Q96MU5 243 aa7.15□□□□□ -1.26
C11orf54-201ENST00000331239 APOHP02749 345 aaPredicted RBP7.15□□□□□ -1.27
C11orf54-201ENST00000331239 PPBPP02775 128 aa7.15□□□□□ -1.27
C11orf54-201ENST00000331239 ADAMTSL5Q6ZMM2 481 aa7.15□□□□□ -1.27
C11orf54-201ENST00000331239 ATOH7Q8N100 152 aa7.15□□□□□ -1.27
C11orf54-201ENST00000331239 CHCHD1Q96BP2 118 aaKnown RBP7.15□□□□□ -1.27
C11orf54-201ENST00000331239 PSG8Q9UQ74 426 aa7.15□□□□□ -1.27
C11orf54-201ENST00000331239 OR4C46A6NHA9 309 aa7.14□□□□□ -1.27
C11orf54-201ENST00000331239 BATFQ16520 125 aa7.14□□□□□ -1.27
C11orf54-201ENST00000331239 PSG3Q16557 428 aa7.14□□□□□ -1.27
C11orf54-201ENST00000331239 AAMDCQ9H7C9 122 aa7.14□□□□□ -1.27
C11orf54-201ENST00000331239 SMAD5-AS1Q9Y6J3 95 aa7.14□□□□□ -1.27
C11orf54-201ENST00000331239 FBN1P35555 2871 aaKnown RBP7.14□□□□□ -1.27
C11orf54-201ENST00000331239 A0A1B0GUT8 65 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 M0R3E3 92 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 HNRNPA3P51991 378 aaKnown RBP7.13□□□□□ -1.27
C11orf54-201ENST00000331239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 Q6ZN92 141 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 STAB1Q9NY15 2570 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 TRAV9-2A0A087WT02 112 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 C20orf202A1L168 122 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 RBAKDNA6NC62 111 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 SOCS3O14543 225 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 ZNF207O43670 478 aaKnown RBP7.13□□□□□ -1.27
C11orf54-201ENST00000331239 NDFIP1Q9BT67 221 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 TMEM70Q9BUB7 260 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
C11orf54-201ENST00000331239 K7EQG2 157 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 CT45A10P0DMU9 189 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 SNRPD3P62318 126 aaKnown RBP7.12□□□□□ -1.27
C11orf54-201ENST00000331239 RIGQ13278 110 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 Q6AWC8 147 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 DUX3Q96PT4 197 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 A0A1B0GW15 77 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 ARMS2P0C7Q2 107 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 CSN1S1P47710 185 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 COL5A1-AS1Q5SY13 56 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 DCANP1Q8TF63 244 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 ASCL2Q99929 193 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 MS4A6AQ9H2W1 248 aa7.12□□□□□ -1.27
C11orf54-201ENST00000331239 TRBV7-9A0A0J9YWB2 115 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 SAP30O75446 220 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 LEPROTL1O95214 131 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 GATD1Q8NB37 220 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 IGHV3OR16-8A0A075B7F1 116 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 CRXO43186 299 aaPredicted RBP7.11□□□□□ -1.27
C11orf54-201ENST00000331239 CRIP1P50238 77 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 BEAN1Q3B7T3 259 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 SPATA12Q7Z6I5 190 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
C11orf54-201ENST00000331239 OR5AL1P0C617 328 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms