RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 MYCNOSP40205 109 aa12.9□□□□□ -0.34
LMNB2-201ENST00000325327 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
LMNB2-201ENST00000325327 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 ATP5LO75964 103 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.35
LMNB2-201ENST00000325327 LINC01006Q8NI28 216 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
LMNB2-201ENST00000325327 A0A0J9YY99 117 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 MALP21145 153 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 OR11H2Q8NH07 326 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 CSTL1Q9H114 145 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 A0A1B0GW64 132 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
LMNB2-201ENST00000325327 TRAV9-1A0A075B6T8 112 aa12.88□□□□□ -0.35
LMNB2-201ENST00000325327 GPHB5Q86YW7 130 aa12.88□□□□□ -0.35
LMNB2-201ENST00000325327 C11orf68Q9H3H3 251 aaKnown RBP12.88□□□□□ -0.35
LMNB2-201ENST00000325327 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
LMNB2-201ENST00000325327 NIT1Q86X76 327 aa12.88□□□□□ -0.35
LMNB2-201ENST00000325327 AMBPP02760 352 aa12.88□□□□□ -0.35
LMNB2-201ENST00000325327 MRAP2Q96G30 205 aa12.88□□□□□ -0.35
LMNB2-201ENST00000325327 DMRT1Q9Y5R6 373 aa12.88□□□□□ -0.35
LMNB2-201ENST00000325327 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
LMNB2-201ENST00000325327 EXPH5Q8NEV8 1989 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 SPATA45Q537H7 98 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 C16orf54Q6UWD8 224 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 GNB1LQ9BYB4 327 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 FOSL1P15407 271 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 PSMG3-AS1Q96PY0 264 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 SMIM6P0DI80 62 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 FRYLO94915 3013 aa12.87□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
LMNB2-201ENST00000325327 C4orf3Q8WVX3 66 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 IGF1P05019 195 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 NEGR1Q7Z3B1 354 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.86□□□□□ -0.35
LMNB2-201ENST00000325327 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
LMNB2-201ENST00000325327 HBDP02042 147 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 ZNF25P17030 456 aaPredicted RBP12.86□□□□□ -0.35
LMNB2-201ENST00000325327 ZNRF2Q8NHG8 242 aa12.86□□□□□ -0.35
LMNB2-201ENST00000325327 TRBV24-1A0A075B6N3 115 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 C5orf52A6NGY3 159 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 P0C879 139 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 ATP5L2Q7Z4Y8 100 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 OR13C6PQ8NH95 151 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 LY96Q9Y6Y9 160 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 C14orf144Q96I85 54 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 C18orf65Q6ZTR6 163 aa12.85□□□□□ -0.35
LMNB2-201ENST00000325327 ORMDL2Q53FV1 153 aa12.84□□□□□ -0.35
LMNB2-201ENST00000325327 HIST1H4GQ99525 98 aa12.84□□□□□ -0.35
LMNB2-201ENST00000325327 EBI3Q14213 229 aa12.84□□□□□ -0.35
LMNB2-201ENST00000325327 PSCAO43653 123 aa12.83□□□□□ -0.35
LMNB2-201ENST00000325327 LOC102724200A0A096LPH7 203 aaPredicted RBP12.83□□□□□ -0.36
LMNB2-201ENST00000325327 EGR2P11161 476 aaPredicted RBP12.83□□□□□ -0.36
LMNB2-201ENST00000325327 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.36
LMNB2-201ENST00000325327 PLA2G2EQ9NZK7 142 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 U3KQE9 123 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 HILS1P60008 231 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 TMEM256Q8N2U0 113 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 FAM167A-AS1Q96KT0 104 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 IGLL1P15814 213 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 CFAP161Q6P656 301 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 LINC00469Q8N7U9 141 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 SMAD5-AS1Q9Y6J3 95 aa12.83□□□□□ -0.36
LMNB2-201ENST00000325327 IGKV1D-37A0A075B6S9 117 aa12.82□□□□□ -0.36
LMNB2-201ENST00000325327 VCYO14598 125 aa12.82□□□□□ -0.36
LMNB2-201ENST00000325327 COLCA2A8K830 154 aa12.82□□□□□ -0.36
LMNB2-201ENST00000325327 TMEM242Q9NWH2 141 aa12.82□□□□□ -0.36
LMNB2-201ENST00000325327 OR5A1Q8NGJ0 315 aa12.82□□□□□ -0.36
LMNB2-201ENST00000325327 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
LMNB2-201ENST00000325327 M0R143 59 aa12.81□□□□□ -0.36
LMNB2-201ENST00000325327 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
LMNB2-201ENST00000325327 K7EMT4 169 aa12.81□□□□□ -0.36
LMNB2-201ENST00000325327 VPS25Q9BRG1 176 aa12.81□□□□□ -0.36
LMNB2-201ENST00000325327 WI2-2373I1.2A0A1W2PRP0 233 aa12.81□□□□□ -0.36
LMNB2-201ENST00000325327 HINT1P49773 126 aaPredicted RBP12.81□□□□□ -0.36
LMNB2-201ENST00000325327 OR2K2Q8NGT1 345 aa12.81□□□□□ -0.36
LMNB2-201ENST00000325327 ZNF702PQ9H963 129 aa12.81□□□□□ -0.36
LMNB2-201ENST00000325327 HOXA5P20719 270 aa12.8□□□□□ -0.36
LMNB2-201ENST00000325327 LAGE3Q14657 143 aa12.8□□□□□ -0.36
LMNB2-201ENST00000325327 TNRC6BQ9UPQ9 1833 aaKnown RBP12.8□□□□□ -0.36
LMNB2-201ENST00000325327 RAB37Q96AX2 223 aa12.8□□□□□ -0.36
LMNB2-201ENST00000325327 EIF4EBP1Q13541 118 aaPredicted RBP12.8□□□□□ -0.36
LMNB2-201ENST00000325327 TMEM89A2RUT3 159 aa12.8□□□□□ -0.36
LMNB2-201ENST00000325327 INS-IGF2F8WCM5 200 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms