RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 ZFHX3Q15911 3703 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 FAM208BQ5VWN6 2430 aa12.4□□□□□ -0.42
CRAT-201ENST00000318080 ERCC8Q13216 396 aa12.4□□□□□ -0.42
CRAT-201ENST00000318080 CSMD2Q7Z408 3487 aa12.4□□□□□ -0.42
CRAT-201ENST00000318080 MT-ATP8P03928 68 aa12.4□□□□□ -0.43
CRAT-201ENST00000318080 HES1Q14469 280 aa12.4□□□□□ -0.43
CRAT-201ENST00000318080 Q6ZQT7 251 aa12.4□□□□□ -0.43
CRAT-201ENST00000318080 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.43
CRAT-201ENST00000318080 J3QR89 54 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 NBR2O15453 112 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 ID1P41134 155 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 SYT8Q8NBV8 401 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 F8W1H4 67 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 ZNF418Q8TF45 676 aaPredicted RBP12.39□□□□□ -0.43
CRAT-201ENST00000318080 MAP1LC3AQ9H492 121 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 PRO0461Q9UI25 63 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 CYSLTR1Q9Y271 337 aa12.39□□□□□ -0.43
CRAT-201ENST00000318080 PRAC2D3DTV9 90 aa12.38□□□□□ -0.43
CRAT-201ENST00000318080 TRGV3P03979 118 aa12.38□□□□□ -0.43
CRAT-201ENST00000318080 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
CRAT-201ENST00000318080 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
CRAT-201ENST00000318080 IGLC6P0CF74 106 aa12.38□□□□□ -0.43
CRAT-201ENST00000318080 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
CRAT-201ENST00000318080 NFE4Q86UQ8 179 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 CFHR4Q92496 578 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 ZMAT4Q9H898 229 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 KMT2BQ9UMN6 2715 aaPredicted RBP12.37□□□□□ -0.43
CRAT-201ENST00000318080 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 IGLV11-55A0A075B6I3 123 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.37□□□□□ -0.43
CRAT-201ENST00000318080 DPM2O94777 84 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 APOMO95445 188 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 ERG28Q9UKR5 140 aa12.37□□□□□ -0.43
CRAT-201ENST00000318080 PDE6HQ13956 83 aa12.36□□□□□ -0.43
CRAT-201ENST00000318080 RNF182Q8N6D2 247 aa12.36□□□□□ -0.43
CRAT-201ENST00000318080 HIGD1BQ9P298 99 aa12.36□□□□□ -0.43
CRAT-201ENST00000318080 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
CRAT-201ENST00000318080 MFAP4P55083 255 aa12.36□□□□□ -0.43
CRAT-201ENST00000318080 C8orf86Q6ZUL3 223 aa12.36□□□□□ -0.43
CRAT-201ENST00000318080 DYNAPQ8N1N2 210 aa12.36□□□□□ -0.43
CRAT-201ENST00000318080 UFC1Q9Y3C8 167 aa12.36□□□□□ -0.43
CRAT-201ENST00000318080 UBR5O95071 2799 aaPredicted RBP12.36□□□□□ -0.43
CRAT-201ENST00000318080 IGHV3-66A0A0C4DH42 116 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 RPL32P62910 135 aaKnown RBP12.35□□□□□ -0.43
CRAT-201ENST00000318080 ANXA2RQ3ZCQ2 193 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 ZFP2Q6ZN57 461 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 IGHV3OR16-13A0A075B7E8 117 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 IGHV3-74A0A0B4J1X5 117 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 C19orf84I3L1E1 186 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 GAGE5Q13069 117 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 GAGE6Q13070 117 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 CDIP1Q9H305 208 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 CELSR2Q9HCU4 2923 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 NCBP2LA6PVI3 153 aaKnown RBP12.35□□□□□ -0.43
CRAT-201ENST00000318080 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
CRAT-201ENST00000318080 ITLN2Q8WWU7 325 aaPredicted RBP12.35□□□□□ -0.43
CRAT-201ENST00000318080 CTSGP08311 255 aa12.34□□□□□ -0.43
CRAT-201ENST00000318080 TENM4Q6N022 2769 aa12.34□□□□□ -0.43
CRAT-201ENST00000318080 DPM3Q9P2X0 92 aa12.34□□□□□ -0.43
CRAT-201ENST00000318080 DTX2Q86UW9 622 aa12.34□□□□□ -0.43
CRAT-201ENST00000318080 RNF5Q99942 180 aa12.34□□□□□ -0.43
CRAT-201ENST00000318080 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
CRAT-201ENST00000318080 SPG11Q96JI7 2443 aa12.33□□□□□ -0.43
CRAT-201ENST00000318080 LOC107984156A0A0G2JMH3 177 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 XGP55808 180 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 MORN3Q6PF18 240 aaPredicted RBP12.33□□□□□ -0.44
CRAT-201ENST00000318080 ARL17AQ8IVW1 177 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 TTC9CQ8N5M4 171 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 ANAPC13Q9BS18 74 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 C11orf21Q9P2W6 132 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 TNFRSF18Q9Y5U5 241 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 PSMB2P49721 201 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 IL17RELQ6ZVW7 336 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 COX8CQ7Z4L0 72 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
CRAT-201ENST00000318080 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
CRAT-201ENST00000318080 RPL7P18124 248 aaKnown RBP12.32□□□□□ -0.44
CRAT-201ENST00000318080 ZNF672Q499Z4 452 aaPredicted RBP12.32□□□□□ -0.44
CRAT-201ENST00000318080 NPBQ8NG41 125 aa12.32□□□□□ -0.44
CRAT-201ENST00000318080 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
CRAT-201ENST00000318080 ATP5J2P56134 94 aa12.32□□□□□ -0.44
CRAT-201ENST00000318080 FBXL19-AS1Q494R0 122 aa12.32□□□□□ -0.44
CRAT-201ENST00000318080 FOXI1Q12951 378 aa12.31□□□□□ -0.44
CRAT-201ENST00000318080 IGHV3-49A0A0A0MS15 119 aa12.31□□□□□ -0.44
CRAT-201ENST00000318080 CD3EP07766 207 aa12.31□□□□□ -0.44
CRAT-201ENST00000318080 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
CRAT-201ENST00000318080 PRSS29PA6NIE9 313 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 IGKV3D-20A0A0C4DH25 116 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 A0A1W2PPR1 153 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 EMP1P54849 157 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 LY6G5BQ8NDX9 201 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 C1QTNF4Q9BXJ3 329 aa12.3□□□□□ -0.44
CRAT-201ENST00000318080 CELSR1Q9NYQ6 3014 aa12.29□□□□□ -0.44
CRAT-201ENST00000318080 FABP5P3A8MUU1 101 aa12.29□□□□□ -0.44
CRAT-201ENST00000318080 PLEKHB2Q96CS7 222 aa12.29□□□□□ -0.44
CRAT-201ENST00000318080 KLHL30-AS1Q8NEE0 82 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms