RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 C9JAW5 83 aa12.74□□□□□ -0.37
BRD3-201ENST00000303407 SPRY2O43597 315 aa12.74□□□□□ -0.37
BRD3-201ENST00000303407 LGALS1P09382 135 aaKnown RBP12.74□□□□□ -0.37
BRD3-201ENST00000303407 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
BRD3-201ENST00000303407 NPSP0C0P6 89 aa12.74□□□□□ -0.37
BRD3-201ENST00000303407 GATA1P15976 413 aaPredicted RBP12.74□□□□□ -0.37
BRD3-201ENST00000303407 Q8NA96 180 aa12.74□□□□□ -0.37
BRD3-201ENST00000303407 SRSF2Q01130 221 aaKnown RBP12.74□□□□□ -0.37
BRD3-201ENST00000303407 LENEPQ9Y5L5 61 aa12.74□□□□□ -0.37
BRD3-201ENST00000303407 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
BRD3-201ENST00000303407 EP400Q96L91 3159 aa12.73□□□□□ -0.37
BRD3-201ENST00000303407 DEFB136Q30KP8 78 aa12.73□□□□□ -0.37
BRD3-201ENST00000303407 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
BRD3-201ENST00000303407 CRYGCP07315 174 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 C16orf54Q6UWD8 224 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 KIR2DL5BA0A0G2JN68 375 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 KIR2DL5BA0A0G2JPC4 375 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 BLCAPP62952 87 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 KIR2DL5AQ8N109 375 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 AJUBAQ96IF1 538 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 TMEM243Q9BU79 118 aa12.72□□□□□ -0.37
BRD3-201ENST00000303407 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 ZNF493Q6ZR52 646 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 C10orf105Q8TEF2 133 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 VWC2LB2RUY7 222 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 BUB3O43684 328 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 K7EP34 96 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 K7ERJ3 54 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 SIVA1O15304 175 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.37
BRD3-201ENST00000303407 GAGE6Q13070 117 aa12.71□□□□□ -0.38
BRD3-201ENST00000303407 PRO3102Q9H379 93 aa12.71□□□□□ -0.38
BRD3-201ENST00000303407 PLA2G5P39877 138 aa12.71□□□□□ -0.38
BRD3-201ENST00000303407 DAD1P61803 113 aa12.71□□□□□ -0.38
BRD3-201ENST00000303407 UTF1Q5T230 341 aa12.71□□□□□ -0.38
BRD3-201ENST00000303407 GTSF1LQ9H1H1 148 aa12.71□□□□□ -0.38
BRD3-201ENST00000303407 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
BRD3-201ENST00000303407 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
BRD3-201ENST00000303407 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 KLF12Q9Y4X4 402 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 GAGE2BQ13066 116 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 GAGE2EQ4V326 116 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 GAGE2DQ9UEU5 116 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 J3QKU1 62 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 Q71RC1 249 aaPredicted RBP12.7□□□□□ -0.38
BRD3-201ENST00000303407 POLEQ07864 2286 aa12.7□□□□□ -0.38
BRD3-201ENST00000303407 SLURP1P55000 103 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 MSRB1Q9NZV6 116 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 F5H768 121 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 ZNF295-AS1Q8N0V1 137 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 SPINK8P0C7L1 97 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 TAL2Q16559 108 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 NDUFA12Q9UI09 145 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 DEFB113Q30KQ7 82 aa12.69□□□□□ -0.38
BRD3-201ENST00000303407 A0A1W2PPM0 123 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 RPL39LQ96EH5 51 aaKnown RBP12.68□□□□□ -0.38
BRD3-201ENST00000303407 ACACAQ13085 2346 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 PRSS29PA6NIE9 313 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 PKDREJQ9NTG1 2253 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 PRB1P04280 392 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 SIRPDQ9H106 197 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 J3QQQ9 107 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 C1orf229Q6ZS94 237 aaPredicted RBP12.68□□□□□ -0.38
BRD3-201ENST00000303407 NRGNQ92686 78 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 LAMTOR3Q9UHA4 124 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 ZNF318Q5VUA4 2279 aa12.68□□□□□ -0.38
BRD3-201ENST00000303407 SPTBN2O15020 2390 aa12.67□□□□□ -0.38
BRD3-201ENST00000303407 K7EMI3 77 aa12.67□□□□□ -0.38
BRD3-201ENST00000303407 EIF4EBP1Q13541 118 aaPredicted RBP12.67□□□□□ -0.38
BRD3-201ENST00000303407 DAZAP2Q15038 168 aaPredicted RBP12.67□□□□□ -0.38
BRD3-201ENST00000303407 ZNF503Q96F45 646 aa12.67□□□□□ -0.38
BRD3-201ENST00000303407 SUMO4Q6EEV6 95 aa12.67□□□□□ -0.38
BRD3-201ENST00000303407 TSSC4Q9Y5U2 329 aaPredicted RBP12.67□□□□□ -0.38
BRD3-201ENST00000303407 IGKV1D-37A0A075B6S9 117 aa12.67□□□□□ -0.38
BRD3-201ENST00000303407 PROP1O75360 226 aa12.67□□□□□ -0.38
BRD3-201ENST00000303407 RHOHQ15669 191 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 FBXL19-AS1Q494R0 122 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 FRMD6-AS1P0C7T7 363 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 PCP2Q8IVA1 136 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 APRG1Q8IVJ8 170 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 U3KQE9 123 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 PCDH15Q96QU1 1955 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 CGB3P0DN86 165 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 CGB7P0DN87 165 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 PFN2P35080 140 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 ROS1P08922 2347 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 TRBV20-1A0A075B6N2 111 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 TDRG1Q3Y452 100 aa12.66□□□□□ -0.38
BRD3-201ENST00000303407 COL6A6A6NMZ7 2263 aa12.65□□□□□ -0.38
BRD3-201ENST00000303407 CCL24O00175 119 aa12.65□□□□□ -0.38
BRD3-201ENST00000303407 APOC4P55056 127 aa12.65□□□□□ -0.38
BRD3-201ENST00000303407 NOP10Q9NPE3 64 aaKnown RBP12.65□□□□□ -0.38
BRD3-201ENST00000303407 HERVK_113P63121 156 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms