RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 RPL18AQ02543 176 aaKnown RBP12.13□□□□□ -0.47
FNDC1-201ENST00000297267 NDUFA12Q9UI09 145 aa12.13□□□□□ -0.47
FNDC1-201ENST00000297267 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 RNF5Q99942 180 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 hADV29S1A0JD25 119 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
FNDC1-201ENST00000297267 CITED1Q99966 193 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 TP73-AS1Q9UF72 201 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 A0A1W2PPM0 123 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 NCR3O14931 201 aa12.12□□□□□ -0.47
FNDC1-201ENST00000297267 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
FNDC1-201ENST00000297267 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
FNDC1-201ENST00000297267 PRAC2D3DTV9 90 aa12.11□□□□□ -0.47
FNDC1-201ENST00000297267 ZDBF2Q9HCK1 2354 aa12.11□□□□□ -0.47
FNDC1-201ENST00000297267 COX8AP10176 69 aa12.11□□□□□ -0.47
FNDC1-201ENST00000297267 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
FNDC1-201ENST00000297267 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
FNDC1-201ENST00000297267 TMEM126AQ9H061 195 aa12.11□□□□□ -0.47
FNDC1-201ENST00000297267 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
FNDC1-201ENST00000297267 ZNF492Q9P255 531 aa12.1□□□□□ -0.47
FNDC1-201ENST00000297267 K7EP13 123 aa12.1□□□□□ -0.47
FNDC1-201ENST00000297267 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
FNDC1-201ENST00000297267 LTAP01374 205 aa12.1□□□□□ -0.47
FNDC1-201ENST00000297267 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
FNDC1-201ENST00000297267 UTF1Q5T230 341 aa12.1□□□□□ -0.47
FNDC1-201ENST00000297267 NUP210Q8TEM1 1887 aaPredicted RBP12.09□□□□□ -0.47
FNDC1-201ENST00000297267 RBAKDNA6NC62 111 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 TRBV12-3P01733 135 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 Q8TCH9 128 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 NUP210LQ5VU65 1888 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 YPEL3P61236 119 aaPredicted RBP12.08□□□□□ -0.48
FNDC1-201ENST00000297267 DTX1Q86Y01 620 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 K7EP34 96 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 SRSF2Q01130 221 aaKnown RBP12.08□□□□□ -0.48
FNDC1-201ENST00000297267 GTF3C1Q12789 2109 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
FNDC1-201ENST00000297267 IGLC7A0M8Q6 106 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 C12orf74Q32Q52 190 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 NPBQ8NG41 125 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 OOSP1A8MZH6 123 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 TMEM141Q96I45 108 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
FNDC1-201ENST00000297267 AGPAT4-IT1Q9H0P7 198 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 PDE6HQ13956 83 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 IGHV4-61A0A0C4DH41 118 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 SOCS3O14543 225 aa12.07□□□□□ -0.48
FNDC1-201ENST00000297267 Q9H8V8 135 aa12.06□□□□□ -0.48
FNDC1-201ENST00000297267 NDUFA4O00483 81 aa12.06□□□□□ -0.48
FNDC1-201ENST00000297267 SPTBN1Q01082 2364 aaKnown RBP12.06□□□□□ -0.48
FNDC1-201ENST00000297267 J3QQQ9 107 aa12.06□□□□□ -0.48
FNDC1-201ENST00000297267 IGLV1-44P01699 117 aa12.06□□□□□ -0.48
FNDC1-201ENST00000297267 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
FNDC1-201ENST00000297267 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
FNDC1-201ENST00000297267 TAL2Q16559 108 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 RNF114Q9Y508 228 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 UTRNP46939 3433 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 CRYBA4P53673 196 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 NTN5Q8WTR8 489 aaPredicted RBP12.05□□□□□ -0.48
FNDC1-201ENST00000297267 IGHG4P01861 327 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 P0DMU3 169 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 FAM231AP0DMU4 169 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 FAM231CP0DMU5 169 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
FNDC1-201ENST00000297267 SMIM2Q9BVW6 85 aa12.05□□□□□ -0.48
FNDC1-201ENST00000297267 HIST2H2BCQ6DN03 193 aa12.04□□□□□ -0.48
FNDC1-201ENST00000297267 FNDC10F2Z333 226 aa12.04□□□□□ -0.48
FNDC1-201ENST00000297267 CCL24O00175 119 aa12.04□□□□□ -0.48
FNDC1-201ENST00000297267 C1QTNF4Q9BXJ3 329 aa12.04□□□□□ -0.48
FNDC1-201ENST00000297267 IGKV3D-7A0A0C4DH55 119 aa12.04□□□□□ -0.48
FNDC1-201ENST00000297267 MRPL53Q96EL3 112 aaKnown RBP12.04□□□□□ -0.48
FNDC1-201ENST00000297267 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
FNDC1-201ENST00000297267 RBMY1FQ15415 496 aaKnown RBP12.03□□□□□ -0.48
FNDC1-201ENST00000297267 FAM231DQ6ZW35 169 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 IGHV4OR15-8A0A075B7B6 117 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 A0A087WW49 117 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 CEACAM8P31997 349 aaPredicted RBP12.03□□□□□ -0.48
FNDC1-201ENST00000297267 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.03□□□□□ -0.48
FNDC1-201ENST00000297267 C20orf144Q9BQM9 153 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 CLPSL1A2RUU4 121 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 GTSF1Q8WW33 167 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 AJUBAQ96IF1 538 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
FNDC1-201ENST00000297267 IFITM1P13164 125 aa12.03□□□□□ -0.48
FNDC1-201ENST00000297267 ZFP36P26651 326 aaKnown RBP12.02□□□□□ -0.48
FNDC1-201ENST00000297267 PATE2Q6UY27 113 aa12.02□□□□□ -0.48
FNDC1-201ENST00000297267 A0A1W2PNU3 283 aaPredicted RBP12.02□□□□□ -0.48
FNDC1-201ENST00000297267 DSCR8Q96T75 97 aa12.02□□□□□ -0.48
FNDC1-201ENST00000297267 GAGE12HA6NDE8 117 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 LHBP01229 141 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 OR11H6Q8NGC7 330 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 CENPVL3A0A0U1RRI6 287 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 IGLV3-1P01715 115 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 LGALS9BQ3B8N2 356 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 LGALS9CQ6DKI2 356 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 BOD1L2Q8IYS8 172 aa12.02□□□□□ -0.49
FNDC1-201ENST00000297267 KIAA1549Q9HCM3 1950 aa12.01□□□□□ -0.49
FNDC1-201ENST00000297267 TP53TG3Q9ULZ0 132 aa12.01□□□□□ -0.49
FNDC1-201ENST00000297267 IGLV2-14P01704 120 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms