RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 NBL1P41271 181 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 TRPM7Q96QT4 1865 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 H7C423 109 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 SP5Q6BEB4 398 aaPredicted RBP9.19□□□□□ -0.94
SNIP1-201ENST00000296215 LYRM9A8MSI8 78 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 F8WEM9 126 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 NXPH4O95158 308 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 UPK3BQ9BT76 320 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 UBE2D1P51668 147 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 TMEM14BQ9NUH8 114 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 MSRB1Q9NZV6 116 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 HHLA3Q9XRX5 114 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 RBBP6Q7Z6E9 1792 aaKnown RBP9.18□□□□□ -0.94
SNIP1-201ENST00000296215 CD164Q04900 197 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 ZCCHC24Q8N2G6 241 aaKnown RBP9.18□□□□□ -0.94
SNIP1-201ENST00000296215 RNF7Q9UBF6 113 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 DOCK10Q96BY6 2186 aa9.18□□□□□ -0.94
SNIP1-201ENST00000296215 C11orf86A6NJI1 115 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 LINC00322Q6ZN03 302 aaPredicted RBP9.17□□□□□ -0.94
SNIP1-201ENST00000296215 PROK2Q9HC23 129 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 PRR14LQ5THK1 2151 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 FHL3Q13643 280 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 SLC22A18ASQ8N1D0 253 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 CCL13Q99616 98 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 TICRRQ7Z2Z1 1910 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 ICE1Q9Y2F5 2266 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 IGHV3OR16-8A0A075B7F1 116 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 CCL3P10147 92 aa9.17□□□□□ -0.94
SNIP1-201ENST00000296215 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 COL5A3P25940 1745 aaPredicted RBP9.16□□□□□ -0.94
SNIP1-201ENST00000296215 TRAV13-2A0A0B4J235 113 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 ZNF876PQ49A33 203 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 LINC00311Q8N616 119 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 IGKV3OR2-268A0A0C4DH90 116 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 M0R1B8 84 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 FAM223AQ8IWN6 122 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 IMMP1LQ96LU5 166 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 TFF1P04155 84 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 BLCAPP62952 87 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 TMEM30BQ3MIR4 351 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 CD177Q8N6Q3 437 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 WFDC9Q8NEX5 89 aa9.16□□□□□ -0.94
SNIP1-201ENST00000296215 GREB1LQ9C091 1923 aaPredicted RBP9.16□□□□□ -0.94
SNIP1-201ENST00000296215 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
SNIP1-201ENST00000296215 SS18L1O75177 396 aaPredicted RBP9.15□□□□□ -0.94
SNIP1-201ENST00000296215 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.94
SNIP1-201ENST00000296215 FRMPD3Q5JV73 1810 aa9.15□□□□□ -0.94
SNIP1-201ENST00000296215 CRYGDP07320 174 aa9.15□□□□□ -0.94
SNIP1-201ENST00000296215 EGR2P11161 476 aaPredicted RBP9.15□□□□□ -0.94
SNIP1-201ENST00000296215 DEFB103AP81534 67 aa9.15□□□□□ -0.94
SNIP1-201ENST00000296215 ENHOQ6UWT2 76 aa9.15□□□□□ -0.94
SNIP1-201ENST00000296215 C11orf44Q8N8P7 122 aa9.15□□□□□ -0.94
SNIP1-201ENST00000296215 ZDBF2Q9HCK1 2354 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 A0A087WVE0 104 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 XCL1P47992 114 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 DAND5Q8N907 189 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 RNF138Q8WVD3 245 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 SRXN1Q9BYN0 137 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 XCL2Q9UBD3 114 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 MED13Q9UHV7 2174 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 CADP27708 2225 aa9.15□□□□□ -0.95
SNIP1-201ENST00000296215 TFF2Q03403 129 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 C1orf53Q5VUE5 145 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 ORMDL1Q9P0S3 153 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 ALPK3Q96L96 1907 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 IGHV3-30P01768 117 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 IGHV3-30-5P0DP03 117 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 PDE6HQ13956 83 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 FAM216BQ8N7L0 139 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 I3L3M4 83 aa9.14□□□□□ -0.95
SNIP1-201ENST00000296215 IGHV3-49A0A0A0MS15 119 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 IGHV1-69DA0A0B4J2H0 117 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 IGFL4Q6B9Z1 124 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 Q9HAA7 133 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 SRRM4A7MD48 611 aaKnown RBP9.13□□□□□ -0.95
SNIP1-201ENST00000296215 DEFB127Q9H1M4 99 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 LST1O00453 97 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 TIRAPP58753 221 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 ARRDC1-AS1Q9H2J1 176 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 ZMAT4Q9H898 229 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 A0A0G2JMZ2 1700 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 LRRC37A2A6NM11 1700 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
SNIP1-201ENST00000296215 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 KLF14Q8TD94 323 aaPredicted RBP9.12□□□□□ -0.95
SNIP1-201ENST00000296215 CCL11P51671 97 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 MYOFQ9NZM1 2061 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 ARID2Q68CP9 1835 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 HCFC1P51610 2035 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 TANC2Q9HCD6 1990 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 COX7A2LO14548 114 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 RPL36AP83881 106 aaKnown RBP9.12□□□□□ -0.95
SNIP1-201ENST00000296215 RPL36ALQ969Q0 106 aaKnown RBP9.12□□□□□ -0.95
SNIP1-201ENST00000296215 TOMM6Q96B49 74 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 SRCAPQ6ZRS2 3230 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 Q6JHZ5 121 aa9.12□□□□□ -0.95
SNIP1-201ENST00000296215 CLEC19AQ6UXS0 136 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms